def __init__(self):
""" @param kwargs: See setArgs() method documentation
"""
SimpleGenomeManipulation.__init__(self)
self.mutationVariate = GaussianVariate()
self.mutationVariate.alpha = 0.1
self.verbosity = 0
def __init__(self):
""" @param kwargs: See setArgs() method documentation
"""
SimpleGenomeManipulation.__init__(self)
self.mutationVariate = GaussianVariate()
self.mutationVariate.alpha = 0.1
self.verbosity=0
class SimpleMutation(SimpleGenomeManipulation):
mutationVariate = None
""" A simple mutation filter, which uses a gaussian variate per default
for mutation.
"""
def __init__(self):
""" @param kwargs: See setArgs() method documentation
"""
SimpleGenomeManipulation.__init__(self)
self.mutationVariate = GaussianVariate()
self.mutationVariate.alpha = 0.1
self.verbosity=0
def apply(self, population):
""" Apply the mutation to the population
@param population: must implement the getIndividuals() method
"""
for individual in population.getIndividuals():
self._mutateIndividual(individual)
def _mutateIndividual(self, individual):
""" Mutate a single individual
@param individual: must implement the getGenome() method
"""
genome = individual.getGenome()
self._manipulateGenome(genome)
def _manipulateValue(self, value):
""" Implementation of the abstract method of class SimpleGenomeManipulation
Set's the x0 value of the variate to value and takes a new sample
value and returns it.
"""
self.mutationVariate.x0 = value
newval = self.mutationVariate.getSample()
# print "MUTATED: ", value, "--->", newval
return newval
class SimpleMutation(SimpleGenomeManipulation):
mutationVariate = None
""" A simple mutation filter, which uses a gaussian variate per default
for mutation.
"""
def __init__(self):
""" @param kwargs: See setArgs() method documentation
"""
SimpleGenomeManipulation.__init__(self)
self.mutationVariate = GaussianVariate()
self.mutationVariate.alpha = 0.1
self.verbosity = 0
def apply(self, population):
""" Apply the mutation to the population
@param population: must implement the getIndividuals() method
"""
for individual in population.getIndividuals():
self._mutateIndividual(individual)
def _mutateIndividual(self, individual):
""" Mutate a single individual
@param individual: must implement the getGenome() method
"""
genome = individual.getGenome()
self._manipulateGenome(genome)
def _manipulateValue(self, value):
""" Implementation of the abstract method of class SimpleGenomeManipulation
Set's the x0 value of the variate to value and takes a new sample
value and returns it.
"""
self.mutationVariate.x0 = value
newval = self.mutationVariate.getSample()
# print "MUTATED: ", value, "--->", newval
return newval
