def cleanup(path=None, exclude=[]):
"""
route for cleaning up testing files
"""
exclude += glob.glob('**/*.cpp', recursive=True)
exclude += glob.glob('**/Makefile', recursive=True)
exclude += glob.glob('**/*.cu', recursive=True)
helpers.Cleanup(path, exclude=exclude)
def cleanup(path=None, exclude=[]):
files = [
"coverage.xml", "pyctest_tomopy_rec.py", "pyctest_tomopy_phantom.py",
"pyctest_tomopy_utils.py"
]
sp.call((sys.executable, os.path.join(os.getcwd(), "setup.py"), "clean"))
helpers.Cleanup(path, extra=files, exclude=exclude)
def cleanup(path=None, exclude=[]):
"""
route for cleaning up testing files
"""
sp.call((sys.executable, os.path.join(os.getcwd(), "setup.py"), "clean"))
helpers.RemovePath(os.path.join(os.getcwd(), "tomopy.egg-info"))
helpers.RemovePath(os.path.join(os.getcwd(), "dist"))
helpers.RemovePath(os.path.join(os.getcwd(), "MANIFEST"))
helpers.Cleanup(path, exclude=exclude)
def run(build_profile, pyctest_args):
pyctest.MODEL = build_profile["cdash_section"]
pyctest.BUILD_NAME = build_profile["build_name"]
# Test Timeout set in build profile, otherwise default to 10 minutes
test_timeout = build_profile.get("test_timeout", 600)
_ready_command = ["cp"]
for cmd in ["configure_command", "build_command", "test_command"]:
if cmd in build_profile:
_ready_command.append(os.path.join(_HERE, build_profile[cmd]))
_ready_command.append(".")
ready_machine = pyctest.command(_ready_command)
ready_machine.SetWorkingDirectory(pyctest.BINARY_DIRECTORY)
ready_machine.SetErrorQuiet(False)
ready_machine.Execute()
helpers.Cleanup(pyctest.BINARY_DIRECTORY)
# Try again a few times if the submission fails...maybe helps the problem
# with tests completing but not submitting to CDash, I hope?
# Also increase the time between attempts
pyctest.SUBMIT_RETRY_COUNT = 3
pyctest.SUBMIT_RETRY_DELAY = 45
if "configure_command" in build_profile:
pyctest.CONFIGURE_COMMAND = " ".join(
["bash", os.path.basename(build_profile["configure_command"])]
)
if "config_opts" in build_profile:
# Add options to select BISICLES / CHOMBO versions
pyctest.CONFIGURE_COMMAND += " {bisicles} {chombo}".format(
**build_profile["config_opts"]
)
if "build_command" in build_profile:
pyctest.BUILD_COMMAND = " ".join(
["bash", os.path.basename(build_profile["build_command"])]
)
if "tests" in build_profile:
# Check links to see where BISICLES and Chombo point to
if "BISICLES" in pyctest.BUILD_NAME:
_bis_build = os.readlink(
f"{build_profile['source_directory']}/BISICLES"
).split("_")[-1][:-1]
_cho_build = os.readlink(
f"{build_profile['source_directory']}/Chombo"
).split("_")[-1][:-1]
pyctest.BUILD_NAME += f"_B{_bis_build[0].upper()}_C{_cho_build[0].upper()}"
for test in build_profile["tests"]:
test_runner = pyctest.test(properties={"TIMEOUT": f"{test_timeout:d}"})
# Echo tests are comma separated so two arguments are passed to the
# bash script to avoid bash having to do string processing
# the test will be in the yaml file as (e.g.: echo,Dome_restart_test)
# and the test `name` would be echo_Dome_restart_test to match the old style
# If there's no comma in the test name, the split/re-join doesn't have any effect
test_runner.SetName("_".join(test.split(",")))
test_runner.SetCommand(
[
"bash",
os.path.basename(build_profile["test_command"]),
*test.split(","),
]
)
test_runner.SetProperty("WORKING_DIRECTORY", pyctest.BINARY_DIRECTORY)
pyctest.run(pyctest.ARGUMENTS)