Python stats_from_fai Examples

Example #1

File: tasks_test.py Project: martinghunt/Fastaq

 def test_stats_from_fai_empty(self):
     '''Test task stats_from_fai empty file'''
     infile = os.path.join(data_dir, 'tasks_test_stats_from_fai.in.empty.fai')
     got = tasks.stats_from_fai(infile)
     expected = {
         'longest': 0,
         'shortest': 0,
         'N50': 0,
         'mean': 0,
         'number': 0,
         'total_length': 0
     }
     self.assertEqual(expected, got)

Example #2

File: tasks_test.py Project: sanger-pathogens/Fastaq

 def test_stats_from_fai_empty(self):
     '''Test task stats_from_fai empty file'''
     infile = os.path.join(data_dir, 'tasks_test_stats_from_fai.in.empty.fai')
     got = tasks.stats_from_fai(infile)
     expected = {
         'longest': 0,
         'shortest': 0,
         'N50': 0,
         'mean': 0,
         'number': 0,
         'total_length': 0
     }
     self.assertEqual(expected, got)