def test_json_string_creation_nodes_and_links(self):
property_tree = GenomePropertiesTree(*self.properties)
test_json = property_tree.to_json(nodes_and_links=True)
expected_json = '''{
"nodes": [{"id": "GenProp0002", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null},
{"id": "GenProp0003", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null},
{"id": "GenProp0066", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null},
{"id": "GenProp0089", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null},
{"id": "GenProp0092", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null}],
"links": [{"parent": "GenProp0002", "child": "GenProp0066"}, {"parent": "GenProp0003", "child": "GenProp0066"},
{"parent": "GenProp0066", "child": "GenProp0089"},
{"parent": "GenProp0066", "child": "GenProp0092"}]}'''
test_json_parsed = json.loads(test_json)
expected_json_parsed = json.loads(expected_json)
test_json_nodes = test_json_parsed['nodes']
expected_json_nodes = expected_json_parsed['nodes']
test_json_links = test_json_parsed['links']
expected_json_links = expected_json_parsed['links']
self.assertCountEqual(test_json_nodes, expected_json_nodes)
self.assertCountEqual(test_json_links, expected_json_links)
def test_json_string_creation(self):
property_tree = GenomePropertiesTree(*self.properties)
test_json = property_tree.to_json()
expected_json_one = '''{"id": "GenProp0002", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null, "notes": null,
"children": [{"id": "GenProp0066", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null, "children": [
{"id": "GenProp0089", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null, "children": []},
{"id": "GenProp0092", "name": "Coenzyme F420 utilization", "type": "GUILD", "description": null,
"notes": null, "children": []}]}]}'''
test_json_parsed = json.loads(test_json)
expected_json_parsed_one = json.loads(expected_json_one)
"""Root could be either GenProp0002 or GenProp0003. See Note 1 in test_find_root_node()."""
expected_json_parsed_two = deepcopy(expected_json_parsed_one)
expected_json_parsed_two['id'] = 'GenProp0003'
self.assertIn(test_json_parsed,
[expected_json_parsed_one, expected_json_parsed_two])