Python Ligand.sequence_pdbs Examples

Example #1

File: test_ligands.py Project: simondharding/pygtop

 def test_can_get_sequence_pdbs_when_no_results(self, mock_xml_retriever,
                                                mock_json_retriever):
     mock_json_retriever.return_value = {"oneLetterSeq": "CCC"}
     mock_xml_retriever.return_value = None
     ligand = Ligand(self.ligand_json)
     pdbs = ligand.sequence_pdbs()
     self.assertEqual(pdbs, [])

Example #2

File: test_ligands.py Project: simondharding/pygtop

 def test_can_get_sequence_pdbs(self, mock_xml_retriever,
                                mock_json_retriever):
     mock_json_retriever.return_value = {"oneLetterSeq": "CCC"}
     mock_xml_retriever.return_value = ["2XG3", "3A1I"]
     ligand = Ligand(self.ligand_json)
     pdbs = ligand.sequence_pdbs()
     self.assertEqual(pdbs, ["2XG3", "3A1I"])

Example #3

File: test_ligands.py Project: samirelanduk/pygtop

 def test_can_get_sequence_pdbs_when_no_results(self, mock_xml_retriever, mock_json_retriever):
     mock_json_retriever.return_value = {"oneLetterSeq": "CCC"}
     mock_xml_retriever.return_value = None
     ligand = Ligand(self.ligand_json)
     pdbs = ligand.sequence_pdbs()
     self.assertEqual(pdbs, [])

Example #4

File: test_ligands.py Project: samirelanduk/pygtop

 def test_can_get_sequence_pdbs(self, mock_xml_retriever, mock_json_retriever):
     mock_json_retriever.return_value = {"oneLetterSeq": "CCC"}
     mock_xml_retriever.return_value = ["2XG3", "3A1I"]
     ligand = Ligand(self.ligand_json)
     pdbs = ligand.sequence_pdbs()
     self.assertEqual(pdbs, ["2XG3", "3A1I"])