def test_set_with_one_annotation(self):
ci = HPOSet([self.ontology[11], self.ontology[13], self.ontology[31]])
assert len(ci.all_genes()) == 1
assert len(ci.omim_diseases()) == 1
assert len(ci.orpha_diseases()) == 1
assert len(ci.decipher_diseases()) == 1
assert ci.all_genes() == set([Gene.get(0)])
assert ci.omim_diseases() == set([Omim.get(0)])
assert ci.orpha_diseases() == set([Orpha.get(0)])
assert ci.decipher_diseases() == set([Decipher.get(0)])
def test_set_with_all_annotations(self):
ci = HPOSet([self.ontology[11], self.ontology[12], self.ontology[41]])
assert len(ci.all_genes()) == 2
assert len(ci.omim_diseases()) == 2
assert len(ci.orpha_diseases()) == 2
assert len(ci.decipher_diseases()) == 2