def volume_color(name, ramp='', quiet=1, _guiupdate=True, _self=cmd): ''' DESCRIPTION Set or get the volume colors. ARGUMENTS name = str: volume object name ramp = str, list or empty: named ramp, space delimited string or list with (x, color, alpha, ...) or (x, r, g, b, alpha, ...) values. If empty, get the current volume colors. EXAMPLE fetch 1a00, map, type=2fofc volume vol, map volume_color vol, .8 cyan 0. 1. blue .3 2. yellow .3 ''' quiet = int(quiet) if not ramp: return get_volume_color(name, quiet, _self) if isinstance(ramp, str) and ramp in namedramps: ramp = namedramps[ramp] ramplist = ramp_expand(ramp) with _self.lockcm: r = cmd._cmd.set_volume_ramp(_self._COb, name, ramplist) if _guiupdate and name in _volume_windows: from pymol import gui def func(): if sys.version_info[0] == 2: import Tkinter else: import tkinter as Tkinter try: panel = _volume_windows[name].panel panel.set_flat(ramplist) except (LookupError, Tkinter.TclError): pass app = gui.get_pmgapp() app.execute(func) if _guiupdate and name in _volume_windows_qt: from pymol import gui app = gui.get_pmgapp() @app.execute def _(): try: panel = _volume_windows_qt[name] panel.widget().editor.setColors(ramplist) except LookupError: pass return r
def volume_color(name, ramp='', quiet=1, _guiupdate=True, _self=cmd): ''' DESCRIPTION Set or get the volume colors. ARGUMENTS name = str: volume object name ramp = str, list or empty: named ramp, space delimited string or list with (x, color, alpha, ...) or (x, r, g, b, alpha, ...) values. If empty, get the current volume colors. EXAMPLE fetch 1a00, map, type=2fofc volume vol, map volume_color vol, .8 cyan 0. 1. blue .3 2. yellow .3 ''' quiet = int(quiet) if not ramp: return get_volume_color(name, quiet, _self) if isinstance(ramp, str) and ramp in namedramps: ramp = namedramps[ramp] ramplist = ramp_expand(ramp) with _self.lockcm: r = cmd._cmd.set_volume_ramp(_self._COb, name, ramplist) if _guiupdate and name in _volume_windows: from pymol import gui def func(): import tkinter as Tkinter try: panel = _volume_windows[name].panel panel.set_flat(ramplist) except (LookupError, Tkinter.TclError): pass app = gui.get_pmgapp() app.execute(func) if _guiupdate and name in _volume_windows_qt: from pymol import gui app = gui.get_pmgapp() @app.execute def _(): try: panel = _volume_windows_qt[name] panel.widget().editor.setColors(ramplist) except LookupError: pass return r
def volume_panel(name, quiet=1, _self=cmd): ''' DESCRIPTION Open an interactive volume ramp panel ARGUMENTS name = str: name of volume object ''' from pymol import gui from pmg_tk import volume if sys.version_info[0] == 2: import Tkinter else: import tkinter as Tkinter app = gui.get_pmgapp() def func(): try: window = _volume_windows[name] window.lift() except (LookupError, Tkinter.TclError): window = Tkinter.Toplevel(app.root) window.title('Volume Panel for "%s"' % name) window.panel = volume.VolumePanel(window, name, _self=cmd) window.panel.pack() _volume_windows[name] = window app.execute(func)
def volume_panel(name, quiet=1, _self=cmd): ''' DESCRIPTION Open an interactive volume ramp panel ARGUMENTS name = str: name of volume object ''' from pymol import gui from pmg_tk import volume import Tkinter app = gui.get_pmgapp() def func(): try: window = _volume_windows[name] window.lift() except (LookupError, Tkinter.TclError): window = Tkinter.Toplevel(app.root) window.title('Volume Panel for "%s"' % name) window.panel = volume.VolumePanel(window, name, _self=cmd) window.panel.pack() _volume_windows[name] = window app.execute(func)
def volume_panel(name, quiet=1, _self=cmd, _noqt=0): ''' DESCRIPTION Open an interactive volume ramp panel ARGUMENTS name = str: name of volume object ''' from pymol import gui qt_window = not int(_noqt) and gui.get_qtwindow() app = gui.get_pmgapp() if qt_window: from pmg_qt import volume as volume_qt @app.execute def _(): try: panel = _volume_windows_qt[name] except LookupError: panel = volume_qt.VolumePanel(qt_window, name, _self=_self) _volume_windows_qt[name] = panel panel.show() panel.raise_() return # Tk fallback from pmg_tk import volume if sys.version_info[0] == 2: import Tkinter else: import tkinter as Tkinter def func(): try: window = _volume_windows[name] window.lift() except (LookupError, Tkinter.TclError): window = Tkinter.Toplevel(app.root) window.title('Volume Panel for "%s"' % name) window.panel = volume.VolumePanel(window, name, _self=_self) window.panel.pack() _volume_windows[name] = window app.execute(func)
def volume_panel(name, quiet=1, _self=cmd, _noqt=0): ''' DESCRIPTION Open an interactive volume ramp panel ARGUMENTS name = str: name of volume object ''' from pymol import gui qt_window = not int(_noqt) and gui.get_qtwindow() app = gui.get_pmgapp() if qt_window: from pmg_qt import volume as volume_qt @app.execute def _(): try: panel = _volume_windows_qt[name] except LookupError: panel = volume_qt.VolumePanel(qt_window, name, _self=_self) _volume_windows_qt[name] = panel panel.show() panel.raise_() return # Tk fallback from pmg_tk import volume if sys.version_info[0] == 2: import Tkinter else: import tkinter as Tkinter def func(): try: window = _volume_windows[name] window.lift() except (LookupError, Tkinter.TclError): window = Tkinter.Toplevel(app.root) window.title('Volume Panel for "%s"' % name) window.panel = volume.VolumePanel(window, name, _self=_self) window.panel.pack() _volume_windows[name] = window app.execute(func)