Example #1
0
    def test_build_parameters(self):
        experiment = Experiment()

        input_params, topology_params = experiment.build_parameters(
            ExperimentDescriptor(sweeps={
                "input.sigma_t": [0.0, 1.0, 2.0],
            }))
        self.assertEqual(len(input_params), 3)
        self.assertEqual(len(topology_params), 1)
        self.assertEqual(input_params[0]["sigma_t"], 0.0)
        self.assertEqual(input_params[1]["sigma_t"], 1.0)
        self.assertEqual(input_params[2]["sigma_t"], 2.0)

        input_params, topology_params = experiment.build_parameters(
            ExperimentDescriptor(
                sweeps={"input.sigma_t": {
                    "min": 0.0,
                    "max": 2.0,
                    "count": 3
                }}))
        self.assertEqual(len(input_params), 3)
        self.assertEqual(len(topology_params), 1)
        self.assertEqual(input_params[0]["sigma_t"], 0.0)
        self.assertEqual(input_params[1]["sigma_t"], 1.0)
        self.assertEqual(input_params[2]["sigma_t"], 2.0)

        input_params, topology_params = experiment.build_parameters(
            ExperimentDescriptor(sweeps={
                "topology.params.tau_m": [0.0, 1.0, 2.0],
            }))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 3)
        self.assertEqual(topology_params[0]["topology"]["params"]["tau_m"],
                         0.0)
        self.assertEqual(topology_params[1]["topology"]["params"]["tau_m"],
                         1.0)
        self.assertEqual(topology_params[2]["topology"]["params"]["tau_m"],
                         2.0)

        input_params, topology_params = experiment.build_parameters(
            ExperimentDescriptor(sweeps={
                "topology.param_noise.tau_m": [0.0, 1.0, 2.0],
            }))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 3)
        self.assertEqual(
            topology_params[0]["topology"]["param_noise"]["tau_m"], 0.0)
        self.assertEqual(
            topology_params[1]["topology"]["param_noise"]["tau_m"], 1.0)
        self.assertEqual(
            topology_params[2]["topology"]["param_noise"]["tau_m"], 2.0)

        input_params, topology_params = experiment.build_parameters(
            ExperimentDescriptor(sweeps=collections.OrderedDict([(
                "topology.param_noise.tau_m",
                [0.0, 1.0, 2.0]), ("data.n_ones_in", [1, 2])])))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 6)
        self.assertEqual(
            topology_params[0]["topology"]["param_noise"]["tau_m"], 0.0)
        self.assertEqual(
            topology_params[1]["topology"]["param_noise"]["tau_m"], 1.0)
        self.assertEqual(
            topology_params[2]["topology"]["param_noise"]["tau_m"], 2.0)
        self.assertEqual(
            topology_params[3]["topology"]["param_noise"]["tau_m"], 0.0)
        self.assertEqual(
            topology_params[4]["topology"]["param_noise"]["tau_m"], 1.0)
        self.assertEqual(
            topology_params[5]["topology"]["param_noise"]["tau_m"], 2.0)
        self.assertEqual(topology_params[0]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[1]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[2]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[3]["data"]["n_ones_in"], 2)
        self.assertEqual(topology_params[4]["data"]["n_ones_in"], 2)
        self.assertEqual(topology_params[5]["data"]["n_ones_in"], 2)
Example #2
0
    def test_build_parameters(self):
        experiment = Experiment()

        input_params, topology_params = experiment.build_parameters(
                ExperimentDescriptor(sweeps={
                    "input.sigma_t": [0.0, 1.0, 2.0],
                }))
        self.assertEqual(len(input_params), 3)
        self.assertEqual(len(topology_params), 1)
        self.assertEqual(input_params[0]["sigma_t"], 0.0)
        self.assertEqual(input_params[1]["sigma_t"], 1.0)
        self.assertEqual(input_params[2]["sigma_t"], 2.0)


        input_params, topology_params = experiment.build_parameters(
                ExperimentDescriptor(sweeps={
                    "input.sigma_t": {"min": 0.0, "max": 2.0, "count": 3}
                }))
        self.assertEqual(len(input_params), 3)
        self.assertEqual(len(topology_params), 1)
        self.assertEqual(input_params[0]["sigma_t"], 0.0)
        self.assertEqual(input_params[1]["sigma_t"], 1.0)
        self.assertEqual(input_params[2]["sigma_t"], 2.0)

        input_params, topology_params = experiment.build_parameters(
                ExperimentDescriptor(sweeps={
                    "topology.params.tau_m": [0.0, 1.0, 2.0],
                }))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 3)
        self.assertEqual(topology_params[0]["topology"]["params"]["tau_m"], 0.0)
        self.assertEqual(topology_params[1]["topology"]["params"]["tau_m"], 1.0)
        self.assertEqual(topology_params[2]["topology"]["params"]["tau_m"], 2.0)

        input_params, topology_params = experiment.build_parameters(
                ExperimentDescriptor(sweeps={
                    "topology.param_noise.tau_m": [0.0, 1.0, 2.0],
                }))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 3)
        self.assertEqual(topology_params[0]["topology"]["param_noise"]["tau_m"],
                0.0)
        self.assertEqual(topology_params[1]["topology"]["param_noise"]["tau_m"],
                1.0)
        self.assertEqual(topology_params[2]["topology"]["param_noise"]["tau_m"],
                2.0)

        input_params, topology_params = experiment.build_parameters(
                ExperimentDescriptor(sweeps=collections.OrderedDict([
                    ("topology.param_noise.tau_m", [0.0, 1.0, 2.0]),
                    ("data.n_ones_in", [1, 2])
                ])))
        self.assertEqual(len(input_params), 1)
        self.assertEqual(len(topology_params), 6)
        self.assertEqual(topology_params[0]["topology"]["param_noise"]["tau_m"],
                0.0)
        self.assertEqual(topology_params[1]["topology"]["param_noise"]["tau_m"],
                1.0)
        self.assertEqual(topology_params[2]["topology"]["param_noise"]["tau_m"],
                2.0)
        self.assertEqual(topology_params[3]["topology"]["param_noise"]["tau_m"],
                0.0)
        self.assertEqual(topology_params[4]["topology"]["param_noise"]["tau_m"],
                1.0)
        self.assertEqual(topology_params[5]["topology"]["param_noise"]["tau_m"],
                2.0)
        self.assertEqual(topology_params[0]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[1]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[2]["data"]["n_ones_in"], 1)
        self.assertEqual(topology_params[3]["data"]["n_ones_in"], 2)
        self.assertEqual(topology_params[4]["data"]["n_ones_in"], 2)
        self.assertEqual(topology_params[5]["data"]["n_ones_in"], 2)
Example #3
0
 def test_validate_keys(self):
     Experiment.validate_keys(["input.sigma_t", "input.p0"])
     Experiment.validate_keys(["topology.w"])
     Experiment.validate_keys(["topology.params.tau_m"])
     Experiment.validate_keys(["topology.param_noise.tau_m"])
     Experiment.validate_keys(["data.n_ones_in"])
     self.assertRaises(ExperimentException,
                       lambda: Experiment.validate_keys([""]))
     self.assertRaises(ExperimentException,
                       lambda: Experiment.validate_keys(["bla"]))
     self.assertRaises(ExperimentException,
                       lambda: Experiment.validate_keys(["bla.blub"]))
     self.assertRaises(ExperimentException,
                       lambda: Experiment.validate_keys(["input"]))
     self.assertRaises(ExperimentException,
                       lambda: Experiment.validate_keys(["input.blub"]))
     self.assertRaises(
         ExperimentException,
         lambda: Experiment.validate_keys(["input.sigma_t.test"]))
     self.assertRaises(
         ExperimentException,
         lambda: Experiment.validate_keys(["topology.params.w"]))
Example #4
0
 def test_validate_keys(self):
     Experiment.validate_keys(["input.sigma_t", "input.p0"])
     Experiment.validate_keys(["topology.w"])
     Experiment.validate_keys(["topology.params.tau_m"])
     Experiment.validate_keys(["topology.param_noise.tau_m"])
     Experiment.validate_keys(["data.n_ones_in"])
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys([""]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["bla"]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["bla.blub"]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["input"]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["input.blub"]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["input.sigma_t.test"]))
     self.assertRaises(ExperimentException,
             lambda: Experiment.validate_keys(["topology.params.w"]))