def setUpContainer(self):
data = list(range(10))
ts = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0]
TestElectricalSeriesIO.make_electrode_table(self)
region = DynamicTableRegion('electrodes', [0, 2], 'the first and third electrodes', self.table)
self.eS = ElectricalSeries('test_eS', 'a hypothetical source', data, region, timestamps=ts)
eD = EventDetection('test_ed', 'detection_method', self.eS, (1, 2, 3), (0.1, 0.2, 0.3))
return eD
def test_init(self):
data = list(range(10))
ts = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0]
table = make_electrode_table()
region = DynamicTableRegion('electrodes', [0, 2], 'the first and third electrodes', table)
eS = ElectricalSeries('test_eS', data, region, timestamps=ts) # noqa: F405
eD = EventDetection('detection_method', eS, (1, 2, 3), (0.1, 0.2, 0.3)) # noqa: F405
self.assertEqual(eD.detection_method, 'detection_method')
self.assertEqual(eD.source_electricalseries, eS)
self.assertEqual(eD.source_idx, (1, 2, 3))
self.assertEqual(eD.times, (0.1, 0.2, 0.3))
self.assertEqual(eD.unit, 'Seconds')
def setUpContainer(self):
""" Return a test EventDetection to read/write """
TestElectricalSeriesIO.make_electrode_table(self)
region = DynamicTableRegion(name='electrodes',
data=[0, 2],
description='the first and third electrodes',
table=self.table)
data = list(range(10))
ts = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0]
self.eS = ElectricalSeries(name='test_eS', data=data, electrodes=region, timestamps=ts)
eD = EventDetection(detection_method='detection_method',
source_electricalseries=self.eS,
source_idx=(1, 2, 3),
times=(0.1, 0.2, 0.3))
return eD