def test_process_makefile__shared_subtrees_with_defaults__defaults_disabled():
subtree = {"A": IsInt(default=1234), "B": IsInt(default=5678)}
specs = {"A": subtree, "B": WithoutDefaults(subtree)}
current = {"A": {"B": 17}, "B": {"A": 71}}
expected = {"A": {"A": 1234, "B": 17}, "B": {"A": 71}}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_process_makefile__sets_missing_keys():
current = {"A": 1}
specs = {
"A": IsInt(default=0),
"B": IsInt(default=-1),
"C": IsInt(default=-2)
}
expected = {"A": 1, "B": -1, "C": -2}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_process_makefile__sets_missing_recursive__with_missing_substructure():
current = {"A": 1}
specs = {
"A": IsInt(default=0),
"B": {
"C": IsInt(default=-1),
"D": IsInt(default=-2)
}
}
expected = {"A": 1, "B": {"C": -1, "D": -2}}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_specs__path_is_displayed_in_exception():
def _path_is_displayed_in_exception(spec, value):
assert_raises_regexp(MakefileError, _DUMMY_PATH_STR, spec, _DUMMY_PATH,
value)
yield _path_is_displayed_in_exception, IsInt(), "foo"
yield _path_is_displayed_in_exception, IsUnsignedInt(), -1
yield _path_is_displayed_in_exception, IsFloat(), "abc"
yield _path_is_displayed_in_exception, IsBoolean(), 1
yield _path_is_displayed_in_exception, IsStr(), 1
yield _path_is_displayed_in_exception, IsNone(), 1
yield _path_is_displayed_in_exception, ValueLT(0), 1
yield _path_is_displayed_in_exception, ValueLE(0), 1
yield _path_is_displayed_in_exception, ValueGE(0), -1
yield _path_is_displayed_in_exception, ValueGT(0), -1
yield _path_is_displayed_in_exception, ValueIn([1]), 2
yield _path_is_displayed_in_exception, ValuesIntersect([1]), [2]
yield _path_is_displayed_in_exception, ValuesSubsetOf([1]), [2]
yield _path_is_displayed_in_exception, ValueMissing(), True
yield _path_is_displayed_in_exception, And(IsStr), 1
yield _path_is_displayed_in_exception, Or(IsStr), 1
yield _path_is_displayed_in_exception, Xor(IsStr, IsInt), True
yield _path_is_displayed_in_exception, Not(IsInt), 1
yield _path_is_displayed_in_exception, StringIn("abc"), 1
yield _path_is_displayed_in_exception, StringsIntersect("abc"), [1]
yield _path_is_displayed_in_exception, StringsSubsetOf("abc"), [1]
yield _path_is_displayed_in_exception, StringIsUppercase(), 1
yield _path_is_displayed_in_exception, StringStartsWith("FOO"), 1
yield _path_is_displayed_in_exception, StringEndsWith("FOO"), 1
yield _path_is_displayed_in_exception, IsListOf(IsInt), "foo"
yield _path_is_displayed_in_exception, IsDictOf(IsInt, IsInt), 1
def test_xor__defaults_not_set_in_specs():
assert_raises(ValueError, Xor, IsInt(default=10), ValueGT(10))
def test_is_int__accepts_integers():
spec = IsInt()
spec(_DUMMY_PATH, 1234)
spec(_DUMMY_PATH, 0)
spec(_DUMMY_PATH, -1234)
def test_process_makefile__implicit_subdict_is_allowed():
current = {"A": 1, "B": None}
expected = {"A": 1, "B": {"C": 3}}
specs = {"A": IsInt, "B": {"C": IsInt(default=3)}}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_process_makefile__accept_missing_value_if_in_implicit_subtree():
current = {"A": 1}
expected = {"A": 1}
specs = {"A": IsInt, IsStr: {"C": IsInt(default=REQUIRED_VALUE)}}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_process_makefile__fails_required_value_not_set_in_dynamic_subtree():
current = {"A": 1, "B": {}}
specs = {"A": IsInt, IsStr: {"C": IsInt(default=REQUIRED_VALUE)}}
assert_raises(MakefileError, process_makefile, current, specs)
def test_process_makefile__fails_when_required_value_not_set():
current = {"A": 1}
specs = {"A": IsInt, "B": {"C": IsInt(default=REQUIRED_VALUE)}}
assert_raises(MakefileError, process_makefile, current, specs)
def test_process_makefile__accept_when_required_value_is_set():
current = {"A": 1, "B": {"C": 3}}
expected = {"A": 1, "B": {"C": 3}}
specs = {"A": IsInt, "B": {"C": IsInt(default=REQUIRED_VALUE)}}
result = process_makefile(current, specs)
assert_equal(result, expected)
def test_is_int__default_description():
spec = IsInt()
assert_equal(spec.description, "an integer")
def _reject_not_str(value):
spec = IsInt()
assert_raises(MakefileError, spec, _DUMMY_PATH, value)
def test_is_int__accepts_longs():
spec = IsInt()
spec(_DUMMY_PATH, 1234L)
spec(_DUMMY_PATH, 0L)
spec(_DUMMY_PATH, -1234L)
def test_is_dict_of__defaults_not_set_in_value_specs():
assert_raises(ValueError, IsDictOf, IsInt, IsInt(default=10))
def test_is_int__default_set__valid_value():
spec = IsInt(default=7913)
assert_equal(spec.default, 7913)
def test_is_list_of__defaults_not_set_in_specs():
assert_raises(ValueError, IsListOf, IsInt(default=10))
def test_is_int__default_not_set():
spec = IsInt()
assert_is(spec.default, DEFAULT_NOT_SET)
def test_is_int__custom_description():
custom_desc = "any old integer"
spec = IsInt(description=custom_desc)
assert_equal(spec.description, custom_desc)
def test_not__defaults_not_set_in_specs():
assert_raises(ValueError, Not, IsInt(default=10))
import pprint
from pypeline.common.makefile import \
MakefileError, \
read_makefile, \
WithoutDefaults, \
Or, \
IsInt, \
IsFloat, \
IsStr, \
StringStartsWith
_SPECIFICATION_OF_OPTIONS = {
StringStartsWith("--") : Or(IsInt, IsFloat),
"--min-depth" : IsInt(default = 8),
"--max-depth" : IsInt(default = 100),
}
_MAKEFILE_SPECIFICATION = {
"Defaults" : _SPECIFICATION_OF_OPTIONS,
"VCF_Files" : {
IsStr : {
"Output_File" : IsStr,
"Options" : WithoutDefaults(_SPECIFICATION_OF_OPTIONS),
}
}
}
