Python PCAMetric.PCAMetric Examples

Example #1

File: TestPCAMetric.py Project: ztypaker/pyProCT

 def test_PCA(self):
     """
     Regression test.
     """
     trajectory_handler = TrajectoryHandlerStub(
         testPCAMetric.not_iterposed_coordsets, 66)
     clustering = Clustering(
         [Cluster(None, range(6)),
          Cluster(None, range(6, 12))], "a clustering")
     pcaMetric = PCAMetric(trajectory_handler)
     self.assertAlmostEquals(pcaMetric.evaluate(clustering), 1.427748687873,
                             12)

Example #2

File: analysisPopulator.py Project: gabocic/python

 def analysis_function_pca(self, clustering, trajectory_handler):
     calculator = PCAMetric(trajectory_handler)
     return calculator.evaluate(clustering)

Example #3

 def analysis_function_pca(self, clustering, data_handler):
     """
     """
     calculator = PCAMetric(data_handler)
     return calculator.evaluate(clustering)