def _setup_server_and_clients(self):
self.server_socket = setup_server()
mkdir(self.tmp_dir)
workers, client_sockets = setup_workers(4, self.tmp_dir, self.server_socket, verbose=False)
return workers, [sock for sock, addr in client_sockets]
def test_setup_server(self):
"""setup_server opens a port and listens"""
self.server_socket = setup_server()
host, port = self.server_socket.getsockname()
# Not much to test here, if we get something back it should work
self.assertGreater(port, 1023)
# binding to a known port should fail
self.assertRaises(error, setup_server, 80)
def test_setup_server(self):
"""setup_server opens a port and listens"""
self.server_socket = setup_server()
host, port = self.server_socket.getsockname()
# Not much to test here, if we get something back it should work
self.assertGreater(port, 1023)
# binding to a known port should fail
self.assertRaises(error, setup_server, 80)
def _setup_server_and_clients(self):
self.server_socket = setup_server()
mkdir(self.tmp_dir)
workers, client_sockets = setup_workers(4, self.tmp_dir,
self.server_socket,
verbose=False)
return workers, [sock for sock, addr in client_sockets]
def test_setup_workers(self):
"""setup_workers starts clients"""
mkdir(self.tmp_dir)
self.server_socket = setup_server()
workers, client_sockets = setup_workers(4, self.tmp_dir, self.server_socket, verbose=False)
self.assertEqual(len(workers), 4)
# Try sending some data, return of send should be length of message
for client_sock, addr in client_sockets:
self.assertEqual(client_sock.send("Hello"), 5)
def test_setup_workers(self):
"""setup_workers starts clients"""
self.server_socket = setup_server()
workers, client_sockets = setup_workers(4, self.tmp_dir,
self.server_socket,
verbose=False)
self.assertEqual(len(workers), 4)
# Try sending some data, return of send should be length of message
for client_sock, addr in client_sockets:
self.assertEqual(client_sock.send("Hello"), 5)
def test_get_flowgram_distances_on_cluster(self):
"""get_flowgram_distances_on_cluster computes the correct alignment score."""
self.tmp_dir = mkdtemp(dir="./", suffix="/")
# setup server and workers
self.socket = setup_server()
workers, client_sockets = setup_workers(1,
self.tmp_dir,
self.socket,
verbose=False)
client_sockets = [a for a, b in client_sockets]
scores, names, fc = get_flowgram_distances_on_cluster(
"1", self.flowgram, self.flowgrams, FlowgramContainerArray(),
{"FZTHQMS01CIW5N": ""}, 1, 1, [1], client_sockets)
stop_workers(client_sockets)
self.assertEqual(names, ["FZTHQMS01CIW5N"])
assert_almost_equal(scores, [[4.95274923, 0.7815385]], decimal=4)
def test_get_flowgram_distances_on_cluster(self):
"""get_flowgram_distances_on_cluster computes the correct alignment score."""
self.tmp_dir=get_tmp_filename(tmp_dir = "./", suffix="/")
mkdir(self.tmp_dir)
#setup server and workers
self.socket = setup_server()
workers, client_sockets = setup_workers(1, self.tmp_dir, self.socket,
verbose=False)
client_sockets = [a for a,b in client_sockets]
scores, names, fc = get_flowgram_distances_on_cluster("1", self.flowgram,
self.flowgrams,
FlowgramContainerArray(),
{"FZTHQMS01CIW5N":""},
1, 1, [1],
client_sockets)
stop_workers(client_sockets)
self.assertEqual(names, ["FZTHQMS01CIW5N"])
self.assertFloatEqual(scores, [4.95274923, 0.7815385])
