def get(self):
"""Show the sample summary page"""
study_id = int(self.get_argument('study_id'))
email = self.current_user.id
res = sample_template_meta_cats_get_req(study_id, email)
if res['status'] == 'error':
if 'does not exist' in res['message']:
raise HTTPError(404, reason=res['message'])
elif 'User does not have access to study' in res['message']:
raise HTTPError(403, reason=res['message'])
else:
raise HTTPError(500, reason=res['message'])
categories = res['categories']
columns, rows = _build_sample_summary(study_id, email)
_, alert_type, alert_msg = get_sample_template_processing_status(
study_id)
self.render('study_ajax/sample_prep_summary.html',
rows=rows,
columns=columns,
categories=categories,
study_id=study_id,
alert_type=alert_type,
alert_message=alert_msg,
user_can_edit=Study(study_id).can_edit(self.current_user))
def get(self):
"""Show the sample summary page"""
study_id = self.get_argument('study_id')
res = sample_template_meta_cats_get_req(int(study_id),
self.current_user.id)
if res['status'] == 'error':
if 'does not exist' in res['message']:
raise HTTPError(404, res['message'])
elif 'User does not have access to study' in res['message']:
raise HTTPError(403, res['message'])
else:
raise HTTPError(500, res['message'])
meta_cats = res['categories']
cols, samps_table = _build_sample_summary(study_id,
self.current_user.id)
_, alert_type, alert_msg = get_sample_template_processing_status(
study_id)
self.render('study_ajax/sample_prep_summary.html',
table=samps_table,
cols=cols,
meta_available=meta_cats,
study_id=study_id,
alert_type=alert_type,
alert_message=alert_msg,
user_can_edit=Study(study_id).can_edit(self.current_user))
def get(self):
"""Show the sample summary page"""
study_id = int(self.get_argument('study_id'))
email = self.current_user.id
res = sample_template_meta_cats_get_req(study_id, email)
if res['status'] == 'error':
if 'does not exist' in res['message']:
raise HTTPError(404, reason=res['message'])
elif 'User does not have access to study' in res['message']:
raise HTTPError(403, reason=res['message'])
else:
raise HTTPError(500, reason=res['message'])
categories = res['categories']
columns, rows = _build_sample_summary(study_id, email)
_, alert_type, alert_msg = get_sample_template_processing_status(
study_id)
self.render('study_ajax/sample_prep_summary.html',
rows=rows, columns=columns, categories=categories,
study_id=study_id, alert_type=alert_type,
alert_message=alert_msg,
user_can_edit=Study(study_id).can_edit(self.current_user))
def get(self):
"""Show the sample summary page"""
study_id = self.get_argument('study_id')
res = sample_template_meta_cats_get_req(
int(study_id), self.current_user.id)
if res['status'] == 'error':
if 'does not exist' in res['message']:
raise HTTPError(404, res['message'])
elif 'User does not have access to study' in res['message']:
raise HTTPError(403, res['message'])
else:
raise HTTPError(500, res['message'])
meta_cats = res['categories']
cols, samps_table = _build_sample_summary(study_id,
self.current_user.id)
_, alert_type, alert_msg = get_sample_template_processing_status(
study_id)
self.render('study_ajax/sample_prep_summary.html',
table=samps_table, cols=cols, meta_available=meta_cats,
study_id=study_id, alert_type=alert_type,
alert_message=alert_msg,
user_can_edit=Study(study_id).can_edit(self.current_user))
