def endAction(self): self.ui.ActionsWidget.setCurrentWidget(self.ui.MenuWidget) self.ui.SubjectHierarchyTreeView.setSelectionMode(qt.QAbstractItemView().SingleSelection) self.ui.MenuWidget.enabled = True self.actionInProgress = False interactionNode = slicer.app.applicationLogic().GetInteractionNode() interactionNode.SetCurrentInteractionMode(interactionNode.ViewTransform) self.resolveStateButtons()
def create(self):
# add a search box
self.searchFrame = qt.QFrame(self.parent)
self.searchFrame.setLayout(qt.QHBoxLayout())
self.parent.layout().addWidget(self.searchFrame)
self.searchLabel = qt.QLabel(self.searchFrame)
self.searchLabel.setText("Search: ")
self.searchFrame.layout().addWidget(self.searchLabel)
self.search = qt.QLineEdit(self.searchFrame)
self.searchFrame.layout().addWidget(self.search)
# model and view for color table
self.view = qt.QTreeView()
self.view.setObjectName('EditColorTreeView')
self.view.setEditTriggers(qt.QAbstractItemView().NoEditTriggers)
self.parent.layout().addWidget(self.view)
self.populateColors()
self.search.connect('textChanged(QString)', self.populateColors)
self.view.connect('activated(QModelIndex)', self.selected)
self.view.setProperty('SH_ItemView_ActivateItemOnSingleClick', 1)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Instantiate and connect widgets ...
#
# Input/Export Area
#
IOCollapsibleButton = ctk.ctkCollapsibleButton()
IOCollapsibleButton.text = "Input and Export"
self.layout.addWidget(IOCollapsibleButton)
# Layout within the dummy collapsible button
#IOFormLayout = qt.QFormLayout(IOCollapsibleButton)
IOFormLayout = qt.QFormLayout(IOCollapsibleButton)
#
# Username input
#
self.userNameInput = qt.QLineEdit()
self.userNameInput.setText(slicer.userNameDefault)
self.userNameInput.setToolTip("Input MorphoSource account username")
IOFormLayout.addRow("MorphSource Username: "******"Input MorphoSource account password")
IOFormLayout.addRow("MorphSource Password: "******"Log in")
self.loginButton.toolTip = "Log into the Morphosource database"
self.loginButton.enabled = False
IOFormLayout.addRow(self.loginButton)
#
# Query parameter area
#
parametersCollapsibleButton = ctk.ctkCollapsibleButton()
parametersCollapsibleButton.text = "Query parameters"
self.layout.addWidget(parametersCollapsibleButton)
# Layout within the dummy collapsible button
parametersFormLayout = qt.QFormLayout(parametersCollapsibleButton)
#
# Username input
#
self.orderInput = qt.QLineEdit()
self.orderInput.setToolTip(
"Input the the specimen order, eg: 'Euprimates' ")
parametersFormLayout.addRow("Query order: ", self.orderInput)
#
# Username input
#
self.elementInput = qt.QLineEdit()
self.elementInput.setToolTip(
"Input the speciment element, eg: 'Cranuim' ")
parametersFormLayout.addRow("Query element: ", self.elementInput)
#
# Submit query Button
#
self.submitQueryButton = qt.QPushButton("Submit query")
self.submitQueryButton.toolTip = "Query the MorphoSource database for 3D models. This may take a few minutes."
self.submitQueryButton.enabled = False
parametersFormLayout.addRow(self.submitQueryButton)
#
# Query results area
#
resultsCollapsibleButton = ctk.ctkCollapsibleButton()
resultsCollapsibleButton.text = "Query results:"
resultsCollapsibleButton.collapsed = False
self.layout.addWidget(resultsCollapsibleButton)
resultsFormLayout = qt.QFormLayout(resultsCollapsibleButton)
self.resultsModel = qt.QStandardItemModel()
self.resultsTable = qt.QTableView()
self.resultsTable.horizontalHeader().stretchLastSection = True
self.resultsTable.horizontalHeader().visible = False
self.resultsTable.verticalHeader().visible = False
self.resultsTable.setSelectionBehavior(
qt.QAbstractItemView().SelectRows)
self.resultsTable.setModel(self.resultsModel)
resultsFormLayout.addRow(self.resultsTable)
self.loadResultsButton = qt.QPushButton("Load selected models")
self.loadResultsButton.toolTip = "Load the selected models into the scene."
self.loadResultsButton.enabled = False
resultsFormLayout.addRow(self.loadResultsButton)
# connections
self.loginButton.connect('clicked(bool)', self.onLogin)
self.userNameInput.connect('textChanged(const QString &)',
self.onLoginStringChanged)
self.passwordInput.connect('textChanged(const QString &)',
self.onLoginStringChanged)
self.orderInput.connect('textChanged(const QString &)',
self.onQueryStringChanged)
self.elementInput.connect('textChanged(const QString &)',
self.onQueryStringChanged)
self.submitQueryButton.connect('clicked(bool)', self.onSubmitQuery)
self.loadResultsButton.connect('clicked(bool)', self.onLoadResults)
# Add vertical spacer
self.layout.addStretch(1)
# Refresh Apply button state
self.onLoginStringChanged()
self.onQueryStringChanged()
def __init__(self, logic, applyButton, buttonsList):
super(ILSVisualizationWidget, self).__init__()
self.logic = logic
self.applyButton = applyButton
self.fiducialButtonsList = buttonsList
self.widget = qt.QWidget()
self.layout = qt.QFormLayout(self.widget)
self.boxHolder = qt.QWidget()
self.boxHolder.setLayout(qt.QVBoxLayout())
self.layout.addRow(self.boxHolder)
self.groupBox = qt.QFrame()
self.groupBox.setLayout(qt.QHBoxLayout())
self.fiducialsCollapsibleButton = ctk.ctkCollapsibleButton()
self.fiducialsCollapsibleButton.text = "Show Fiducials"
self.fiducialsCollapsibleButton.hide()
self.fiducialsFormLayout = qt.QFormLayout(
self.fiducialsCollapsibleButton)
# Table Widget Definition
self.tableWidget = qt.QTableWidget()
self.tableWidget.sortingEnabled = False
self.tableWidget.hide()
self.tableWidget.setColumnCount(3)
self.tableWidget.setColumnWidth(0, 190)
self.tableWidget.setColumnWidth(1, 190)
self.tableWidget.setColumnWidth(2, 190)
self.tableWidget.setMaximumWidth(590)
horizontalBar = self.tableWidget.horizontalScrollBar()
horizontalBar.setDisabled(True)
horizontalBar.hide()
self.tableWidget.setHorizontalHeaderLabels([
"Left Oblique Fiducials", "Right Oblique Fiducials",
"Right Horizontal Fiducials"
])
behavior = qt.QAbstractItemView()
self.tableWidget.setSelectionBehavior(behavior.SelectItems)
self.tableWidget.setSelectionMode(behavior.SingleSelection)
self.tableWidget.setContextMenuPolicy(3)
self.tableWidget.customContextMenuRequested.connect(self.onRightClick)
self.groupBox.layout().addWidget(self.tableWidget)
self.fiducialsFormLayout.addWidget(self.groupBox)
self.boxHolder.layout().addWidget(self.fiducialsCollapsibleButton)
self.pendingUpdate = False
self.updatingFiducials = False
self.observerTags = []
self.leftRow = 0
self.rightObliqueRow = 0
self.rightHorizontalRow = 0
self.tableItems = []
self.deletionGroupBox = qt.QFrame()
self.deletionGroupBox.setLayout(qt.QHBoxLayout())
self.fiducialsFormLayout.addWidget(self.deletionGroupBox)
#
# Delete Selected Fiducials Button
#
self.deleteButton = qt.QPushButton("Delete Selected Fiducial")
self.deleteButton.toolTip = "Select a fiducial from the table and push this button to delete the selected fiducial from the scene."
self.deleteButton.enabled = True
selectedIcon = qt.QIcon(":/Icons/MarkupsDelete.png")
self.deleteButton.setIcon(selectedIcon)
self.deleteButton.setFixedSize(220, 30)
self.deletionGroupBox.layout().addWidget(self.deleteButton)
self.deleteButton.connect('clicked(bool)',
self.onDeleteOneFiducialButton)
#
# Delete All Fiducials Button
#
self.deleteAllButton = qt.QPushButton("Delete All Fiducials")
self.deleteAllButton.toolTip = "Delete all fiducials in the scene."
self.deleteAllButton.enabled = True
allIcon = qt.QIcon(":/Icons/MarkupsDeleteAllRows.png")
self.deleteAllButton.setIcon(allIcon)
self.deleteAllButton.setFixedSize(220, 30)
self.deletionGroupBox.layout().addWidget(self.deleteAllButton)
# self.fiducialsFormLayout.addRow(self.deleteAllButton)
self.deleteAllButton.connect('clicked(bool)', self.dialogBoxFunction)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Instantiate and connect widgets ...
# Set up tabs to split workflow
tabsWidget = qt.QTabWidget()
curvesTab = qt.QWidget()
curvesTabLayout = qt.QFormLayout(curvesTab)
fiducialsTab = qt.QWidget()
fiducialsTabLayout = qt.QFormLayout(fiducialsTab)
batchTab = qt.QWidget()
batchTabLayout = qt.QFormLayout(batchTab)
tabsWidget.addTab(curvesTab, "Merge Curves")
tabsWidget.addTab(fiducialsTab, "Merge Landmark Sets")
tabsWidget.addTab(batchTab, "Batch Merge Landmark Sets")
self.layout.addWidget(tabsWidget)
################## Curves Tab
#
# Parameters Area
#
parametersCurveCollapsibleButton = ctk.ctkCollapsibleButton()
parametersCurveCollapsibleButton.text = "Curve Viewer"
curvesTabLayout.addRow(parametersCurveCollapsibleButton)
# Layout within the dummy collapsible button
parametersCurveFormLayout = qt.QFormLayout(
parametersCurveCollapsibleButton)
#
# check box to trigger taking screen shots for later use in tutorials
#
self.continuousCurvesCheckBox = qt.QCheckBox()
self.continuousCurvesCheckBox.checked = 0
self.continuousCurvesCheckBox.setToolTip(
"If checked, redundant points will be removed on merging.")
parametersCurveFormLayout.addRow("Contiuous curves",
self.continuousCurvesCheckBox)
#
# markups view
#
self.markupsView = slicer.qMRMLSubjectHierarchyTreeView()
self.markupsView.setMRMLScene(slicer.mrmlScene)
self.markupsView.setMultiSelection(True)
self.markupsView.setAlternatingRowColors(True)
self.markupsView.setDragDropMode(qt.QAbstractItemView().DragDrop)
self.markupsView.setColumnHidden(
self.markupsView.model().transformColumn, True)
self.markupsView.sortFilterProxyModel().setNodeTypes(
["vtkMRMLMarkupsCurveNode"])
parametersCurveFormLayout.addRow(self.markupsView)
#
# Merge Button
#
self.mergeButton = qt.QPushButton("Merge highlighted nodes")
self.mergeButton.toolTip = "Generate a single merged markup file from the selected nodes"
self.mergeButton.enabled = False
parametersCurveFormLayout.addRow(self.mergeButton)
# connections
self.mergeButton.connect('clicked(bool)', self.onMergeButton)
self.markupsView.connect('currentItemChanged(vtkIdType)',
self.updateMergeButton)
################ Landmark Set Tab
#
# Parameters Area
#
parametersLMCollapsibleButton = ctk.ctkCollapsibleButton()
parametersLMCollapsibleButton.text = "Landmark Viewer"
fiducialsTabLayout.addRow(parametersLMCollapsibleButton)
# Layout within the dummy collapsible button
parametersLMFormLayout = qt.QGridLayout(parametersLMCollapsibleButton)
#
# markups view
#
self.markupsFiducialView = slicer.qMRMLSubjectHierarchyTreeView()
self.markupsFiducialView.setMRMLScene(slicer.mrmlScene)
self.markupsFiducialView.setMultiSelection(True)
self.markupsFiducialView.setAlternatingRowColors(True)
self.markupsFiducialView.setDragDropMode(
qt.QAbstractItemView().DragDrop)
self.markupsFiducialView.setColumnHidden(
self.markupsView.model().transformColumn, True)
self.markupsFiducialView.sortFilterProxyModel().setNodeTypes(
["vtkMRMLMarkupsFiducialNode"])
parametersLMFormLayout.addWidget(self.markupsFiducialView, 0, 0, 1, 3)
#
# Set landmark type menu
#
boxLabel = qt.QLabel("Select landmark type description to apply: ")
self.LandmarkTypeSelection = qt.QComboBox()
self.LandmarkTypeSelection.addItems(
["Select", "Fixed", "Semi", "No description"])
parametersLMFormLayout.addWidget(boxLabel, 1, 0)
parametersLMFormLayout.addWidget(self.LandmarkTypeSelection, 1, 1)
#
# Apply Landmark Type Button
#
self.ApplyLMButton = qt.QPushButton("Apply to highlighted nodes")
self.ApplyLMButton.toolTip = "Apply the selected landmark type to points in the the selected nodes"
self.ApplyLMButton.enabled = False
parametersLMFormLayout.addWidget(self.ApplyLMButton, 1, 2)
#
# Merge Button
#
self.mergeLMButton = qt.QPushButton("Merge highlighted nodes")
self.mergeLMButton.toolTip = "Generate a single merged markup file from the selected nodes"
self.mergeLMButton.enabled = False
parametersLMFormLayout.addWidget(self.mergeLMButton, 2, 0, 1, 3)
# connections
self.mergeLMButton.connect('clicked(bool)', self.onMergeLMButton)
self.ApplyLMButton.connect('clicked(bool)', self.onApplyLMButton)
self.markupsFiducialView.connect('currentItemChanged(vtkIdType)',
self.updateMergeLMButton)
self.LandmarkTypeSelection.connect('currentIndexChanged(int)',
self.updateApplyLMButton)
################ Batch Run LM Merge Tab
#
# Fixed LM Area
#
fixedBatchCollapsibleButton = ctk.ctkCollapsibleButton()
fixedBatchCollapsibleButton.text = "Fixed LM File Selection"
batchTabLayout.addRow(fixedBatchCollapsibleButton)
# Layout within the dummy collapsible button
fixedBatchLayout = qt.QFormLayout(fixedBatchCollapsibleButton)
#
# Browse Fixed LM Button
#
self.browseFixedLMButton = qt.QPushButton("Select files...")
self.browseFixedLMButton.toolTip = "Select one fixed landmark file for each subject"
self.browseFixedLMButton.enabled = True
fixedBatchLayout.addRow(self.browseFixedLMButton)
#
# File viewer box
#
self.fixedFileTable = qt.QTextEdit()
fixedBatchLayout.addRow(self.fixedFileTable)
#
# Semi LM Area
#
semiBatchCollapsibleButton = ctk.ctkCollapsibleButton()
semiBatchCollapsibleButton.text = "Semi LM File Selection"
batchTabLayout.addRow(semiBatchCollapsibleButton)
# Layout within the dummy collapsible button
semiBatchLayout = qt.QFormLayout(semiBatchCollapsibleButton)
#
# Browse Fixed LM Button
#
self.browseSemiLMButton = qt.QPushButton("Select files...")
self.browseSemiLMButton.toolTip = "Select one semi-landmark file for each subject, in the same order as the fixed landmarks"
self.browseSemiLMButton.enabled = True
semiBatchLayout.addRow(self.browseSemiLMButton)
#
# File viewer box
#
self.semiFileTable = qt.QTextEdit()
semiBatchLayout.addRow(self.semiFileTable)
#
# Merge LM Area
#
batchMergeCollapsibleButton = ctk.ctkCollapsibleButton()
batchMergeCollapsibleButton.text = "Run merge"
batchTabLayout.addRow(batchMergeCollapsibleButton)
# Layout within the dummy collapsible button
batchMergeLayout = qt.QFormLayout(batchMergeCollapsibleButton)
#
# Select output landmark directory
#
self.outputDirectorySelector = ctk.ctkPathLineEdit()
self.outputDirectorySelector.filters = ctk.ctkPathLineEdit.Dirs
self.outputDirectorySelector.toolTip = "Select the output directory where the merged landmark nodes will be saved"
batchMergeLayout.addRow("Select output landmark directory: ",
self.outputDirectorySelector)
#
# Batch Merge Button
#
self.batchMergeButton = qt.QPushButton(
"Merge fixed and semi-landmark nodes")
self.batchMergeButton.toolTip = "Generate a single merged markup file from the selected nodes"
self.batchMergeButton.enabled = False
batchMergeLayout.addRow(self.batchMergeButton)
#
# Clear Button
#
self.clearButton = qt.QPushButton("Clear landmark file selections")
self.clearButton.toolTip = "Clear the landmark files selected in the viewer boxes"
self.clearButton.enabled = False
batchMergeLayout.addRow(self.clearButton)
# connections
self.browseFixedLMButton.connect('clicked(bool)',
self.addFixedByBrowsing)
self.browseSemiLMButton.connect('clicked(bool)',
self.addSemiByBrowsing)
self.outputDirectorySelector.connect('validInputChanged(bool)',
self.onSelectDirectory)
self.batchMergeButton.connect('clicked(bool)', self.onBatchMergeButton)
self.clearButton.connect('clicked(bool)', self.onClearButton)
# Add vertical spacer
self.layout.addStretch(1)
def beginAction(self): self.ui.SubjectHierarchyTreeView.setSelectionMode(qt.QAbstractItemView().NoSelection) self.ui.MenuWidget.enabled = False self.modelHistory.cacheState() self.actionInProgress = True self.resolveStateButtons()
def setup(self):
"""
Called when the user opens the module the first time and the widget is initialized.
"""
ScriptedLoadableModuleWidget.setup(self)
# Load widget from .ui file (created by Qt Designer).
# Additional widgets can be instantiated manually and added to self.layout.
uiWidget = slicer.util.loadUI(self.resourcePath('UI/OsteotomyPlanner.ui'))
self.layout.addWidget(uiWidget)
self.ui = slicer.util.childWidgetVariables(uiWidget)
# Set scene in MRML widgets. Make sure that in Qt designer the top-level qMRMLWidget's
# "mrmlSceneChanged(vtkMRMLScene*)" signal in is connected to each MRML widget's.
# "setMRMLScene(vtkMRMLScene*)" slot.
uiWidget.setMRMLScene(slicer.mrmlScene)
# Create logic class. Logic implements all computations that should be possible to run
# in batch mode, without a graphical user interface.
self.logic = OsteotomyPlannerLogic()
# Connections
# These connections ensure that we update parameter node when scene is closed
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.StartCloseEvent, self.onSceneStartClose)
self.addObserver(slicer.mrmlScene, slicer.mrmlScene.EndCloseEvent, self.onSceneEndClose)
#Set up SubjectHieratchy combo
nodeTypes = ['vtkMRMLFolderDisplayNode']
levelFilters = [slicer.vtkMRMLSubjectHierarchyConstants().GetDICOMLevelPatient(), slicer.vtkMRMLSubjectHierarchyConstants().GetDICOMLevelStudy(), slicer.vtkMRMLSubjectHierarchyConstants().GetSubjectHierarchyLevelFolder()]
self.ui.SubjectHierarchyComboBox.setNodeTypes(nodeTypes)
self.ui.SubjectHierarchyComboBox.setLevelFilter(levelFilters)
self.ui.SubjectHierarchyComboBox.connect("currentItemChanged(vtkIdType)", self.onFolderChanged)
self.ui.SubjectHierarchyTreeView.connect("currentItemChanged(vtkIdType)", self.onViewItemChanged)
self.ui.SubjectHierarchyTreeView.hideColumn(2)
# self.ui.SubjectHierarchyTreeView.hideColumn(3)
self.ui.SubjectHierarchyTreeView.hideColumn(4)
self.ui.SubjectHierarchyTreeView.hideColumn(5)
#Selection
self.ui.SubjectHierarchyTreeView.setSelectionMode(qt.QAbstractItemView().SingleSelection)
self.ui.ActionsWidget.setCurrentWidget(self.ui.MenuWidget)
self.ui.MenuWidget.enabled = False
self.ui.MoveButton.clicked.connect(self.beginMove)
moveIcon = qt.QIcon(":/Icons/Transform.png")
self.ui.MoveButton.setIcon(moveIcon)
self.ui.MoveCancelButton.clicked.connect(self.endMove)
self.ui.MoveConfirmButton.clicked.connect(self.confirmMove)
self.ui.CurveCutButton.clicked.connect(self.beginCurveCut)
curveCutIcon = qt.QIcon(":/Icons/CurveCut.png")
self.ui.CurveCutButton.setIcon(curveCutIcon)
self.ui.PlaceCurveButton.clicked.connect(self.placeManualCurve)
self.ui.PreviewCurveCutButton.clicked.connect(self.previewCurveCut)
self.ui.CurveCutConfirmButton.clicked.connect(self.confirmCurveCut)
self.ui.CurveCutCancelButton.clicked.connect(self.endCurveCut)
self.ui.SplitButton.clicked.connect(self.beginSplit)
splitIcon = qt.QIcon(":/Icons/DynamicModeler.png")
self.ui.SplitButton.setIcon(splitIcon)
self.ui.SplitCancelButton.clicked.connect(self.endSplit)
self.ui.ManualPlaneButton.clicked.connect(self.placeManualPlane)
self.ui.ClearPlaneButton.clicked.connect(self.clearPlanes)
self.ui.AutoPlaneButton.clicked.connect(self.placeAutoPlane)
self.ui.PreviewSplitButton.clicked.connect(self.previewSplit)
self.ui.SplitConfirmButton.clicked.connect(self.confirmSplit)
self.ui.RemoveButton.clicked.connect(self.beginRemove)
removeIcon = qt.QIcon(":/Icons/Medium/SlicerEditCut.png")
self.ui.RemoveButton.setIcon(removeIcon)
self.ui.RemoveConfirmButton.clicked.connect(self.confirmRemove)
self.ui.RemoveCancelButton.clicked.connect(self.endRemove)
self.ui.FinishButton.clicked.connect(self.finishPlan)
finishIcon = qt.QIcon(":/Icons/AnnotationOkDone.png")
self.ui.FinishButton.setIcon(finishIcon)
self.ui.RedoButton.clicked.connect(self.restoreNextState)
redoIcon = qt.QIcon(":/Icons/Medium/SlicerRedo.png")
self.ui.RedoButton.setIcon(redoIcon)
self.ui.UndoButton.clicked.connect(self.restorePreviousState)
undoIcon = qt.QIcon(":/Icons/Medium/SlicerUndo.png")
self.ui.UndoButton.setIcon(undoIcon)
# self.ui.RedoButton.visible = False
self.transform = None
self.activeNode = None
self.curve = None
self.splitPlanes = []
self.splitModels = []
self.actionInProgress = False
self.modelHistory = ModelHistory()
# Make sure parameter node is initialized (needed for module reload)
self.initializeParameterNode()
self.resolveStateButtons()
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Instantiate and connect widgets ...
#
# Parameters Area
#
parametersCollapsibleButton = ctk.ctkCollapsibleButton()
parametersCollapsibleButton.text = "Parameters"
self.layout.addWidget(parametersCollapsibleButton)
# Layout within the dummy collapsible button
parametersFormLayout = qt.QFormLayout(parametersCollapsibleButton)
#
# check box to trigger taking screen shots for later use in tutorials
#
self.continuousCurvesCheckBox = qt.QCheckBox()
self.continuousCurvesCheckBox.checked = 0
self.continuousCurvesCheckBox.setToolTip(
"If checked, redundant points will be removed on merging.")
parametersFormLayout.addRow("Contiuous curves",
self.continuousCurvesCheckBox)
#
# Apply Button
#
self.applyButton = qt.QPushButton("Apply")
self.applyButton.toolTip = "Generate semilandmarks."
self.applyButton.enabled = False
parametersFormLayout.addRow(self.applyButton)
#
# markups view
#
self.markupsView = slicer.qMRMLSubjectHierarchyTreeView()
self.markupsView.setMRMLScene(slicer.mrmlScene)
self.markupsView.setMultiSelection(True)
self.markupsView.setAlternatingRowColors(True)
self.markupsView.setDragDropMode(qt.QAbstractItemView().DragDrop)
self.markupsView.setColumnHidden(
self.markupsView.model().transformColumn, True)
self.markupsView.sortFilterProxyModel().setNodeTypes(
["vtkMRMLMarkupsCurveNode"])
parametersFormLayout.addRow(self.markupsView)
#
# Merge Button
#
self.mergeButton = qt.QPushButton("Merge highlighted nodes")
self.mergeButton.toolTip = "Generate a single merged markup file from the selected nodes"
self.mergeButton.enabled = False
parametersFormLayout.addRow(self.mergeButton)
# connections
self.mergeButton.connect('clicked(bool)', self.onMergeButton)
self.markupsView.connect('currentItemChanged(vtkIdType)',
self.updateMergeButton)
# Add vertical spacer
self.layout.addStretch(1)
def setup(self):
ScriptedLoadableModuleWidget.setup(self)
# Instantiate and connect widgets ...
#
# Data Area
#
dataGroupBox = ctk.ctkCollapsibleGroupBox()
dataGroupBox.setTitle('Data')
self.layout.addWidget(dataGroupBox)
dataGridLayout = qt.QGridLayout(dataGroupBox)
self.dirButton = ctk.ctkDirectoryButton()
dirButtonLabel = qt.QLabel('DICOM Directory: ')
dataGridLayout.addWidget(dirButtonLabel, 1, 1, 1, 1)
dataGridLayout.addWidget(self.dirButton, 1, 2, 1, 3)
self.dirButton.setMaximumWidth(500)
orLabel = qt.QLabel(' - or - ')
dataGridLayout.addWidget(orLabel, 2, 1, 1, 1)
collectionsComboBoxLabel = qt.QLabel('TCIA Collection: ')
dataGridLayout.addWidget(collectionsComboBoxLabel, 3, 1, 1, 1)
try:
m = slicer.modules.tciabrowser
self.tcia = slicer.modules.tciabrowser.widgetRepresentation().self(
)
self.connectTCIAButton = qt.QPushButton('Connect')
self.connectTCIAButton.toolTip = "Connect to TCIA Server."
dataGridLayout.addWidget(self.connectTCIAButton, 3, 2, 1, 1)
self.collectionsComboBox = qt.QComboBox()
dataGridLayout.addWidget(self.collectionsComboBox, 3, 3, 1, 2)
# connections
self.connectTCIAButton.connect('clicked(bool)',
self.getTCIACollectionValues)
# TODO disable scrolling event for collectionsComboBox
self.collectionsComboBox.connect('currentIndexChanged(QString)',
self.onTCIACollectionChanged)
except AttributeError:
# TODO add button to open Extensions Manager
noConnectionLabel = qt.QLabel('TCIA Browser not installed.')
dataGridLayout.addWidget(noConnectionLabel, 3, 2, 1, 1)
#
# Patient Table Area
#
self.patientGroupBox = ctk.ctkCollapsibleGroupBox()
self.patientGroupBox.setTitle('Patient Selection')
self.layout.addWidget(self.patientGroupBox)
self.patientGroupBoxLayout = qt.QGridLayout(self.patientGroupBox)
self.patientsTable = qt.QTableWidget()
self.patientsTableHeaderLabels = [
'ID', 'Name', 'BirthDate', 'Sex', 'Modalities'
]
self.patientsTable.setColumnCount(5)
self.patientsTable.sortingEnabled = True
self.patientsTable.setHorizontalHeaderLabels(
self.patientsTableHeaderLabels)
self.patientsTableHeader = self.patientsTable.horizontalHeader()
self.patientsTableHeader.setStretchLastSection(True)
self.patientGroupBoxLayout.addWidget(self.patientsTable, 1, 1, 1, 5)
abstractItemView = qt.QAbstractItemView()
self.patientsTable.setSelectionBehavior(abstractItemView.SelectRows)
self.examinePatientButton = qt.QPushButton('Examine')
self.examinePatientButton.setEnabled(False)
self.patientGroupBoxLayout.addWidget(self.examinePatientButton, 2, 4,
1, 2)
#
# Other Connections
#
self.dirButton.connect('directoryChanged(const QString &)',
self.onDICOMDirectoryChanged)