Python Pipeline.cancel_all Examples

Example #1

File: batch.py Project: clhughes/reV

 def _cancel_all(self):
     """Cancel all reV pipeline modules for all batch jobs."""
     for d in self.sub_dirs:
         pipeline_config = os.path.join(
             d, os.path.basename(self._config.pipeline_config))
         if os.path.isfile(pipeline_config):
             Pipeline.cancel_all(pipeline_config)

Example #2

File: cli_pipeline.py Project: clhughes/reV

def from_config(ctx, config_file, cancel, monitor, background, verbose):
    """Run reV pipeline from a config file."""
    verbose = any([verbose, ctx.obj['VERBOSE']])

    if cancel:
        Pipeline.cancel_all(config_file)
    elif monitor and background:
        pipeline_monitor_background(config_file, verbose=verbose)
    else:
        Pipeline.run(config_file, monitor=monitor, verbose=verbose)