Example #1
0
def test_progress_max_refresh() -> None:
    """Test max_refresh argment."""
    time = 0.0

    def get_time() -> float:
        nonlocal time
        try:
            return time
        finally:
            time = time + 1.0

    console = Console(color_system=None,
                      width=80,
                      legacy_windows=False,
                      force_terminal=True)
    column = TextColumn("{task.description}")
    column.max_refresh = 3
    progress = Progress(
        column,
        get_time=get_time,
        auto_refresh=False,
        console=console,
    )
    console.begin_capture()
    with progress:
        task_id = progress.add_task("start")
        for tick in range(6):
            progress.update(task_id, description=f"tick {tick}")
            progress.refresh()
    result = console.end_capture()
    print(repr(result))
    assert (
        result ==
        "\x1b[?25l\r\x1b[2Kstart\r\x1b[2Kstart\r\x1b[2Ktick 1\r\x1b[2Ktick 1\r\x1b[2Ktick 3\r\x1b[2Ktick 3\r\x1b[2Ktick 5\r\x1b[2Ktick 5\n\x1b[?25h"
    )
Example #2
0
class DefaultProgressHandler(BaseProgressHandler):
    def __init__(self):
        self.progress = Progress(
            TextColumn("[bold blue]{task.fields[title]}", justify="right"),
            BarColumn(bar_width=None),
            "[progress.percentage]{task.percentage:>3.1f}%",
            "•",
            DownloadColumn(),
            "•",
            TransferSpeedColumn(),
            "•",
            TimeRemainingColumn(),
        )

    def initialize(self, *args, **kwargs):
        super().initialize(*args)

        self.download_task = self.progress.add_task(self.track_title,
                                                    title=self.track_title,
                                                    total=self.total_size)
        self.progress.start()

    def update(self, *args, **kwargs):
        super().update(**kwargs)
        self.progress.update(self.download_task,
                             advance=self.current_chunk_size)

    def close(self, *args, **kwargs):
        self.progress.stop()
class ProgressBar:
    OPTIONS = [
        "[progress.description]{task.description}",
        BarColumn(),
        "[progress.percentage]{task.completed:>6}/{task.total}",
        TimeElapsedColumn(),
    ]

    def __init__(self, description, total):
        self.description = description
        self.total = total

    def __enter__(self):
        self.progress = Progress(*self.OPTIONS)
        self.progress.start()
        self.task = self.progress.add_task(self.description, total=self.total)
        return self

    def __exit__(self, exc_type, exc_val, exc_tb):
        self.progress.stop()

    def print(self, message):
        self.progress.console.print(message)

    def advance(self, advance=1):
        self.progress.update(self.task, advance=advance)
Example #4
0
def predict(trainData, trainLabel, testData, K=27):
    '''
    测试模型正确率
    ===========
    Arguments
    ---------
    - `trainData` 训练集数据集
    - `trainLabel` 训练集标记
    - `testData` 测试集数据集
    - `K` 选择近邻数

    Returns
    -------
    - `predictLabel` 预测标签
    '''
    predictLabel = []

    progress = Progress(
        "[progress.description]{task.description}",
        BarColumn(bar_width=None),
        "[progress.percentage]{task.completed}/{task.total}",
        "•",
        TimeRemainingColumn(),
    )  # rich 进度条
    progress.start()

    testTask = progress.add_task("[cyan]predicting...", total=len(testData))

    for x in testData:
        predictLabel.append(NearestNeighbor(trainData, trainLabel, x,
                                            K))  # 预测标签分类
        progress.update(testTask, advance=1)

    progress.stop()
    return predictLabel
Example #5
0
 def download(self, batch, articles, folder):
     """
         Download a pdf batch
     """
     log_file = os.path.join(folder, 'missing.log')
     logger.remove()
     logger.add(log_file,
                format="{time} {level} {message}",
                mode='w',
                level="INFO")
     assert len(articles) > 0, 'no article.'
     progress = Progress(TextColumn(
         "[progress.description]{task.description}",
         table_column=Column(ratio=1)),
                         TimeElapsedColumn(table_column=Column(ratio=1)),
                         BarColumn(table_column=Column(ratio=2)),
                         "| {task.completed} of {task.total:>2.0f}",
                         expand=False)
     missing = 0
     with progress:
         task = progress.add_task(f" {batch} |", total=len(articles))
         for article in articles:
             done = self.get_article(
                 article['article_url'],
                 os.path.join(folder, article['file_name']))
             if done:
                 progress.update(task, advance=1)
             else:
                 missing += 1
                 logger.info("NOT_FOUND_IN_SCI-HUB | " +
                             article['warning_str'])
     return missing, log_file
Example #6
0
class _Progress:
    def __init__(self, show_limit: int = 50):
        from rich.progress import Progress, BarColumn, TimeRemainingColumn
        self._progress = Progress(
            "[progress.description]{task.description}",
            BarColumn(style="bar.back",
                      complete_style="bar.complete",
                      finished_style="bar.complete"),
            "[progress.percentage]{task.percentage:>3.0f}%",
            TimeRemainingColumn(),
            auto_refresh=False)
        self._last_update = _datetime.now()
        self._show_limit = show_limit
        self._completed = {}

        self._have_entered = False
        self._enter_args = None

    def __enter__(self, *args, **kwargs):
        self._enter_args = (args, kwargs)
        return self

    def __exit__(self, *args, **kwargs):
        if self._have_entered:
            self._progress.__exit__(*args, **kwargs)

        return False

    def add_task(self, description: str, total: int):
        if total > self._show_limit:
            if not self._have_entered:
                args, kwargs = self._enter_args
                self._progress.__enter__(*args, **kwargs)
                self._have_entered = True

            task_id = self._progress.add_task(description=description,
                                              total=total)
            self._completed[task_id] = 0
            return task_id
        else:
            return None

    def update(self, task_id: int, completed: float = None,
               advance: float = None, force_update: bool = False):
        if task_id is None:
            return
        elif completed is not None:
            self._completed[task_id] = completed
        elif advance is not None:
            self._completed[task_id] += advance
        else:
            return

        now = _datetime.now()

        if force_update or (now - self._last_update).total_seconds() > 0.1:
            self._progress.update(task_id=task_id,
                                  completed=self._completed[task_id])
            self._progress.refresh()
            self._last_update = now
Example #7
0
async def fetch_taxid_call(name: str, progress: Progress,
                           q: asyncio.queues.Queue, task: int):
    """
    Handles calling asynchronous taxon id retrievals and updating task progress.
    Puts results in a asyncio Queue.

    Parameters:
        name (str): name of a OTU
        progress (Progress): Progress object for current tasks that can be updated
        q (asyncio.queues.Queue): Queue containing current results of tasks
        task (int): ID for a given progress task

    """
    taxid = await asyncio.get_event_loop().run_in_executor(
        None, fetch_taxid, name)

    if taxid is None:
        description = f"[red]Could not retrieve taxon ID for {name}"
        result = f"[red]:x: Not found"
    else:
        description = f"[green]Retrieved taxon ID for {name}"
        result = f"[green]:heavy_check_mark: {taxid}"

    progress.print(description, result)
    progress.update(task, advance=1)
    await q.put((name, taxid))
Example #8
0
def make_progress() -> Progress:
    _time = 0.0

    def fake_time():
        nonlocal _time
        try:
            return _time
        finally:
            _time += 1

    console = Console(
        file=io.StringIO(),
        force_terminal=True,
        color_system="truecolor",
        width=80,
        legacy_windows=False,
    )
    progress = Progress(console=console, get_time=fake_time, auto_refresh=False)
    task1 = progress.add_task("foo")
    task2 = progress.add_task("bar", total=30)
    progress.advance(task2, 16)
    task3 = progress.add_task("baz", visible=False)
    task4 = progress.add_task("egg")
    progress.remove_task(task4)
    task4 = progress.add_task("foo2", completed=50, start=False)
    progress.stop_task(task4)
    progress.start_task(task4)
    progress.update(
        task4, total=200, advance=50, completed=200, visible=True, refresh=True
    )
    progress.stop_task(task4)
    return progress
Example #9
0
class ProgressBarCallback(tf.keras.callbacks.Callback):
    def __init__(self, steps: int):
        super().__init__()
        self.steps = steps
        self.task = None
        self.bar = Progress(
            TextColumn(
                "Iteration {task.fields[iteration]}/{task.fields[cumul]}"),
            BarColumn(),
            TextColumn("[progress.percentage]{task.percentage:>3.0f}%"),
            TextColumn("Loss = {task.fields[loss]:.5f} | ⏳ "),
            TimeRemainingColumn(),
            TextColumn("lr = {task.fields[lr]:.6f}"),
        )

    def on_train_begin(self, logs=None):
        self.task = self.task = self.bar.add_task(
            description="Optimizing...",
            total=self.steps,
            iteration=self.model._tot_batches,
            loss=self.model._loss,
            cumul=self.steps + self.model._tot_batches,
            lr=float(tf.keras.backend.get_value(self.model.optimizer.lr)))

    def on_train_batch_end(self, batch, logs=None):
        self.model._tot_batches += 1
        self.bar.update(
            self.task,
            advance=1,
            refresh=True,
            iteration=self.model._tot_batches,
            loss=self.model._loss,
            lr=float(tf.keras.backend.get_value(self.model.optimizer.lr)))
Example #10
0
    def train(self, input_path, train_datasets):
        """
        Train the model
        :param num_steps:
        :return:
        """

        # Define the optimizer
        optimizer = tf.keras.optimizers.Adam(learning_rate=self.learning_rate)

        # Build model graph
        self.build_model(input_path=input_path,
                         train_datasets=train_datasets,
                         mode="train")

        # Training loop
        progress_bar = Progress(
            "[bold blue]{task.description}",
            "[bold cyan]Step: {task.fields[step]}, Loss: {task.fields[loss]}",
            BarColumn(bar_width=None),
        )

        training_progress = progress_bar.add_task(self.model_name,
                                                  total=self.num_steps,
                                                  step=0,
                                                  loss=1)
        with progress_bar:

            for step in range(self.num_steps):

                x, y = self.data_iter.get_next()

                with tf.GradientTape() as tape:
                    self.logits = self.model(x, training=True)
                    loss = self.compute_loss(self.logits, y)

                grads = tape.gradient(loss, self.model.trainable_weights)

                optimizer.apply_gradients(
                    zip(grads, self.model.trainable_weights))

                progress_bar.update(training_progress,
                                    advance=1,
                                    step=step,
                                    loss=f"{loss:.4f}")

                # Collect garbage after 100 steps - otherwise runs out of memory
                if step % 100 == 0:
                    gc.collect()

        # Save the trained model
        self.model.save(self.model_dir)
        pd.DataFrame(self.labels).to_csv(os.path.join(self.model_dir,
                                                      "celltypes.txt"),
                                         sep="\t")
        pd.DataFrame(self.sig_genes).to_csv(os.path.join(
            self.model_dir, "genes.txt"),
                                            sep="\t")
Example #11
0
    class ProgressHandler(BaseProgressHandler):
        def __init__(self):
            self.tracks = {}
            self.progress = Progress(
                TextColumn("[bold blue]{task.fields[title]}", justify="left"),
                BarColumn(bar_width=None),
                "[progress.percentage]{task.percentage:>3.2f}%",
                "•",
                DownloadColumn(),
                "•",
                TransferSpeedColumn(),
                "•",
                TimeRemainingColumn(),
                transient=True)

        def initialize(self, iterable, track_title, track_quality, total_size,
                       chunk_size, **kwargs):
            track_id = kwargs["track_id"]

            task = self.progress.add_task(track_title,
                                          title=track_title,
                                          total=total_size)

            self.progress.console.print(
                f"[bold red]{track_title}[/] has started downloading.")

            self.tracks[track_id] = {
                "id": track_id,
                "iterable": iterable,
                "title": track_title,
                "quality": track_quality,
                "total_size": total_size,
                "chunk_size": chunk_size,
                "task": task,
                "size_downloaded": 0,
                "current_chunk_size": 0
            }

            self.progress.start()

        def update(self, *args, **kwargs):
            track = self.tracks[kwargs["track_id"]]
            track["current_chunk_size"] = kwargs["current_chunk_size"]
            track["size_downloaded"] += track["current_chunk_size"]

            self.progress.update(track["task"],
                                 advance=track["current_chunk_size"])

        def close(self, *args, **kwargs):
            track = self.tracks[kwargs["track_id"]]
            track_title = track["title"]
            self.progress.print(
                f"[bold red]{track_title}[/] is done downloading.")

        def close_progress(self):
            self.progress.refresh()
            self.progress.stop()
Example #12
0
 async def add_progress_bar(self, progress_task: ProgressTask,
                            progress: Progress) -> None:
     """creates a new progress task and adds a ProgressTask instance to the internal registry"""
     task_id = progress.add_task(**progress_task.kwargs)
     if progress_task.progress:
         progress.update(task_id, advance=progress_task.progress)
     task = [t for t in progress.tasks if t.id == task_id][0]
     progress_task.task = task
     self.tasks[int(progress_task.sim_id)] = progress_task
Example #13
0
def update(progress: Progress, overall: int, items: dict[str, tuple[int, str]], stats: dict[str, Any]) -> None:
    progress.update(
        overall,
        description=f"{stats['complete']} Gifts Obtained",
        completed=stats["progress"],
    )
    for item in stats["items"]:
        progress.update(
            items[item[1]],
            completed=item[0],
        )
Example #14
0
class Log():
    def __init__(self):
        self.__progress = Progress(
            SpinnerColumn(),
            TextColumn(
                "[progress.description]{task.description} {task.fields[current]}"
            ),
            "•",
            BarColumn(),
            "•",
            TransferSpeedColumn(),
            TimeRemainingColumn(),
            console=Console(),
            transient=True,
            expand=True)
        self.__console = self.__progress.console

    def success(self, msg: str, **kwargs):
        self.__console.print(f"[bold green]{msg}[/bold green]", **kwargs)

    def error(self, msg: str, **kwargs):
        self.__console.print(f"[bold red]{msg}[/bold red]", **kwargs)

    def warning(self, msg: str, **kwargs):
        self.__console.print(f"[bold yellow]{msg}[/bold yellow]", **kwargs)

    # Get all the details avaiable about one or more object passed to it
    def details(self, *args):
        for arg in args:
            inspect(arg, methods=True)

    # This a simple and quick variadic print with option for some styling
    def debug(self, *args, **kwargs):
        for arg in args:
            self.__console.print(arg, **kwargs)

    # Print documentation both in a single string or markdown format
    def documentation(self, title: str, doc: str, markdown: bool = False):
        self.__console.rule(f"[bold yellow]{title}", align="center")
        if markdown:
            md = Markdown(doc)
            self.__console.print(md, justify="center")
        else:
            self.__console.print(f"[bold yellow]{doc}", justify="left")

    # Construct and return a tuple with ...
    def progress_bar_builder(self, label: str, total: int, current: str = ""):
        task_id = self.__progress.add_task(label, total, current=current)

        def update_task(increment: int, current: str):
            self.__progress.update(task_id, current=current, advance=increment)

        return (self.__progress, update_task)
Example #15
0
async def download_image(session: aiohttp.ClientSession, url: str,
                         file_path: str, progress: Progress, task):
    try:
        async with session.get(url) as response:
            assert response.status == 200
            async with aiofiles.open(file_path, 'wb') as f:
                await f.write(await response.read())
        progress.console.print(f'Downloaded {url} to {file_path}')
    except Exception as e:
        progress.console.print(f'Download for {url} failed: {str(e)}')

    progress.update(task, advance=1)
Example #16
0
def benchmark(name: str, func: Callable, num_repeats: int,
              progress_bar: Progress) -> List[float]:
    """Return list of run times for func, num_repeats times"""
    run_times = []
    text_color = '[blue]'
    task = progress_bar.add_task(f"{text_color}{name}", total=num_repeats)
    for i in range(num_repeats):
        progress_bar.tasks[
            task].description = f"{text_color}{name}: run {i + 1}/{num_repeats}"
        run_times.append(timeit(func, number=1))
        progress_bar.update(task, advance=1)
    return run_times
async def download_image(
        progress: Progress, task_id: TaskID, image_url: str, destination: Path
) -> None:
    async with httpx.AsyncClient() as client:
        response = await client.get(image_url)
        if response.status_code >= 400:
            progress.console.print(f'image [blue]{image_url}[/] could not be downloaded')
            progress.update(task_id, advance=1)
            return

        path = destination / image_url.split('/')[-1]
        path.write_bytes(response.content)
        progress.update(task_id, advance=1)
Example #18
0
 def generate_progress(
         self, progress: Progress,
         task: TaskID) -> Union[ConsoleRenderable, RichCast, str]:
     """Returns the updated progress bar"""
     total = 0
     completed = 0
     for w in self.workers:
         if w.__meta__.name == "CSVReader":
             total += w.__meta__.items_processed
         elif w.__meta__.name == "DomainResolver":
             completed += w.__meta__.items_processed
     progress.update(task, total=total, completed=completed)
     return progress.get_renderable()
Example #19
0
 def track(self, tasks, label="Processing"):
     progress = Progress(
         "[progress.description][yellow]{task.description} {task.fields[key]}",
         BarColumn(),
         "[progress.percentage]{task.percentage:>3.0f}%",
         TimeRemainingColumn(),
         console=self)
     with progress:
         task_bar = progress.add_task(label, total=len(tasks), key="")
         for idx, task in enumerate(tasks):
             progress.update(task_bar, completed=idx, key=task)
             yield task
         progress.update(task_bar, advance=1, key="finished")
Example #20
0
class ProgressManager():
    progress = None
    task = None
    current_pos = 0
    total = 0

    def __init__(self, total, current_pos):
        self.total = total
        self.progress = Progress(
            #SpinnerColumn(),
            "{task.description}",
            BarColumn(),
            "{task.completed}",
            "of",
            "{task.total}",
            "documents.",
        )
        self.task = self.progress.add_task("Progress:", total=self.total)

        # Current position adjusted to non-zero
        self.current_pos = current_pos + 1

        print('Document %s of %s' % (self.current_pos, self.total))

        # First document
        self.add_progress(self.current_pos)

    def __rich__(self) -> Panel:
        try:
            return Panel(self.progress)
        except Exception as e:
            print(e)

    def add_progress(self, advance):
        self.progress.update(self.task, advance=advance)

    def next(self):
        if self.current_pos == self.total:
            self.current_pos = 1
            self.progress.update(self.task, advance=-self.total + 1)
        else:
            self.progress.update(self.task, advance=1)
            self.current_pos += 1

    def prev(self):
        if self.current_pos == 1:
            self.current_pos = self.total
            self.progress.update(self.task, advance=self.total - 1)
        else:
            self.progress.update(self.task, advance=-1)
            self.current_pos -= 1
Example #21
0
def predict(trainData,
            trainLabel,
            testData,
            kernel='Gaussian',
            C=200,
            epsilon=0.0001,
            sigma=10,
            p=2):
    '''
    测试模型正确率
    ===========
    Arguments
    ---------
    - `trainData` 训练集数据集
    - `trainLabel` 训练集标记
    - `testData` 测试集数据集
    - `kernel` 核函数
    - `C` 软间隔惩罚参数
    - `epsilon` 松弛变量
    - `sigma` 高斯核函数参数
    - `p` 多项式核参数

    Returns
    -------
    - `predictLabel` 预测标签
    '''
    predictLabel = []
    machine = SupportVectorMachine(kernel=kernel,
                                   C=C,
                                   epsilon=epsilon,
                                   sigma=sigma)
    machine.train(trainData, trainLabel)

    progress = Progress(
        "[progress.description]{task.description}",
        BarColumn(bar_width=None),
        "[progress.percentage]{task.completed}/{task.total}",
        "•",
        TimeRemainingColumn(),
    )  # rich 进度条
    progress.start()

    testTask = progress.add_task("[cyan]predicting...", total=len(testData))

    for testDatum in testData:
        predictLabel.append(machine.classify(testDatum))  # 预测标签分类
        progress.update(testTask, advance=1)

    progress.stop()
    return predictLabel
Example #22
0
 async def advance_progress(self, data: Dict, progress: Progress) -> None:
     """advances the progress bar for the given tasks by the current simulation progress"""
     simulation_id = data["data"]["simulation_id"]
     sim_progress = data["data"]["progress"]
     progress_task = self.tasks.get(int(simulation_id))
     if not progress_task.task.started:
         progress.start_task(progress_task.task.id)
     # progress.console.print(f">>>>>>>>>>  {sim_progress}")
     if int(sim_progress) <= progress_task.task.percentage:
         return
     advance_by = int(sim_progress) - int(progress_task.task.percentage)
     progress.update(progress_task.task.id, advance=advance_by)
     # auto_refresh is False so do this manually
     progress.refresh()
Example #23
0
def _download(url: str, root: str):
    os.makedirs(root, exist_ok=True)
    filename = os.path.basename(url)

    download_target = os.path.join(root, filename)
    if os.path.isfile(download_target):
        return download_target

    if os.path.exists(download_target) and not os.path.isfile(download_target):
        raise FileExistsError(f'{download_target} exists and is not a regular file')

    from rich.progress import (
        DownloadColumn,
        Progress,
        TextColumn,
        TimeRemainingColumn,
        TransferSpeedColumn,
    )

    progress = Progress(
        TextColumn("[bold blue]{task.fields[filename]}", justify="right"),
        "[progress.percentage]{task.percentage:>3.1f}%",
        "•",
        DownloadColumn(),
        "•",
        TransferSpeedColumn(),
        "•",
        TimeRemainingColumn(),
    )

    with progress:

        task = progress.add_task('download', filename=url, start=False)

        with urllib.request.urlopen(url) as source, open(
            download_target, 'wb'
        ) as output:

            progress.update(task, total=int(source.info().get('Content-Length')))

            progress.start_task(task)
            while True:
                buffer = source.read(8192)
                if not buffer:
                    break

                output.write(buffer)
                progress.update(task, advance=len(buffer))

    return download_target
Example #24
0
    def create_subsample_dataset(self, x, y, celltypes):
        """
        Generate many artifial bulk samples with known fractions
        This function will create normal and sparse samples (no_samples)
        @param x:
        @param y:
        @param celltypes:
        @return:
        """
        sim_x = []
        sim_y = []

        # Create normal samples
        progress_bar = Progress(
            "[bold blue]{task.description}",
            "[bold cyan]{task.fields[samples]}",
            BarColumn(bar_width=None),
        )
        with progress_bar:
            normal_samples_progress = progress_bar.add_task(
                "Normal samples", total=self.num_samples, samples=0)
            sparse_samples_progress = progress_bar.add_task(
                "Sparse samples", total=self.num_samples, samples=0)

            # Create normal samples
            for i in range(self.num_samples):
                progress_bar.update(normal_samples_progress,
                                    advance=1,
                                    samples=i + 1)
                sample, label = self.create_subsample(x, y, celltypes)
                sim_x.append(sample)
                sim_y.append(label)

            # Create sparase samples
            for i in range(self.num_samples):
                progress_bar.update(sparse_samples_progress,
                                    advance=1,
                                    samples=i + 1)
                sample, label = self.create_subsample(x,
                                                      y,
                                                      celltypes,
                                                      sparse=True)
                sim_x.append(sample)
                sim_y.append(label)

        sim_x = pd.concat(sim_x, axis=1).T
        sim_y = pd.DataFrame(sim_y, columns=celltypes)

        return sim_x, sim_y
Example #25
0
    def run(self, manager: "pwncat.manager.Manager", args):

        # Create a progress bar for the download
        progress = Progress(
            TextColumn("[bold cyan]{task.fields[filename]}", justify="right"),
            BarColumn(bar_width=None),
            "[progress.percentage]{task.percentage:>3.1f}%",
            "•",
            DownloadColumn(),
            "•",
            TransferSpeedColumn(),
            "•",
            TimeRemainingColumn(),
        )

        if not args.destination:
            args.destination = f"./{os.path.basename(args.source)}"

        try:
            length = os.path.getsize(args.source)
            started = time.time()
            with progress:
                task_id = progress.add_task("upload",
                                            filename=args.destination,
                                            total=length,
                                            start=False)

                with open(args.source, "rb") as source:
                    with manager.target.platform.open(args.destination,
                                                      "wb") as destination:
                        progress.start_task(task_id)
                        copyfileobj(
                            source,
                            destination,
                            lambda count: progress.update(task_id,
                                                          advance=count),
                        )
                        progress.update(task_id,
                                        filename="draining buffers...")
                        progress.stop_task(task_id)

                    progress.start_task(task_id)
                    progress.update(task_id, filename=args.destination)

            elapsed = time.time() - started
            console.log(f"uploaded [cyan]{human_readable_size(length)}[/cyan] "
                        f"in [green]{human_readable_delta(elapsed)}[/green]")
        except (FileNotFoundError, PermissionError, IsADirectoryError) as exc:
            self.parser.error(str(exc))
Example #26
0
def make_progress() -> Progress:
    console = Console(file=io.StringIO(), force_terminal=True)
    progress = Progress(console=console)
    task1 = progress.add_task("foo")
    task2 = progress.add_task("bar", 30)
    progress.advance(task2, 16)
    task3 = progress.add_task("baz", visible=False)
    task4 = progress.add_task("egg")
    progress.remove_task(task4)
    task4 = progress.add_task("foo2", completed=50, start=False)
    progress.start_task(task4)
    progress.update(
        task4, total=200, advance=50, completed=200, visible=True, refresh=True
    )
    return progress
Example #27
0
def parse_apk(apkfile, workers, fn_match=None, outfile=None):
    console = Console()
    console.log(f"Parsing {apkfile} with {workers} workers ...")
    dexes = list(extract_dex_files(apkfile))
    console.log(f"Found {len(dexes)} DEX file.")
    total = sum(map(lambda d: len(d.data), dexes))
    progress = Progress(
        TextColumn("[progress.description]{task.description}"),
        BarColumn(
            complete_style='bar.complete',
            finished_style='bar.finished',
            pulse_style='bar.pulse',
        ),
        TextColumn("[progress.percentage]{task.percentage:>3.0f}%"),
        TimeRemainingColumn(),
        TimeElapsedColumn(),
        console=console,
    )
    out = {}
    out.update(JNI_COMMON)
    num_classes = 0
    t0 = datetime.now()
    with progress:
        task = progress.add_task("Analyzing...", total=total)
        with multiprocessing.Pool(workers) as pool:
            result = pool.imap(parse_dex_proc, dexes)
            for dex, count, res in result:
                if count == 0:
                    console.log(
                        "Parse {} ({} bytes) [bold red]failed: {}".format(
                            dex.name, len(dex.data), res))
                    continue
                console.log("Parse {} ({} bytes), found {} classes.".format(
                    dex.name, len(dex.data), count))
                num_classes += count
                progress.update(task, advance=len(dex.data))
                for cname, data in res.items():
                    if fn_match and not fn_match(cname):
                        continue
                    out.update(data)
    console.log("Aanlyzed {} classes, cost: {}".format(num_classes,
                                                       datetime.now() - t0))
    console.log("Found {} JNI methods.".format(len(out)))
    if not outfile:
        console.print_json(data=out)
    else:
        with open(outfile, 'w') as f:
            json.dump(out, f, indent=2, ensure_ascii=False)
Example #28
0
 def progress_step(self, step_key, step_name, total):
     """Context manager to show a progress bar during a step execution."""
     step_progress = Progress(
         '{task.description}',
         SpinnerColumn(spinner_name='earth'),
         BarColumn(),
         TextColumn('[progress.percentage]{task.percentage:>3.0f}%'),
     )
     step_job = step_progress.add_task(step_name, total=total)
     self.progress_bars[step_key] = {
         C.PROGRESS_KEY: step_progress,
         C.JOB_KEY: step_job,
     }
     self.progress_table.add_row(step_progress)
     yield
     step_progress.update(step_job, completed=step_progress.tasks[0].total)
Example #29
0
def retrieve_over_http(url, output_file_path):
    """Download file from remote location, with progress bar.

    Parameters
    ----------
    url : str
        Remote URL.
    output_file_path : str or Path
        Full file destination for download.

    """
    # Make Rich progress bar
    progress = Progress(
        TextColumn("[bold]Downloading...", justify="right"),
        BarColumn(bar_width=None),
        "{task.percentage:>3.1f}%",
        "•",
        DownloadColumn(),
        "• speed:",
        TransferSpeedColumn(),
        "• ETA:",
        TimeRemainingColumn(),
    )

    CHUNK_SIZE = 4096
    response = requests.get(url, stream=True)

    try:
        with progress:
            task_id = progress.add_task(
                "download",
                filename=output_file_path.name,
                start=True,
                total=int(response.headers.get("content-length", 0)),
            )

            with open(output_file_path, "wb") as fout:
                for chunk in response.iter_content(chunk_size=CHUNK_SIZE):
                    fout.write(chunk)
                    progress.update(task_id, advance=len(chunk), refresh=True)

    except requests.exceptions.ConnectionError:
        output_file_path.unlink()
        raise requests.exceptions.ConnectionError(
            f"Could not download file from {url}"
        )
Example #30
0
class RichLogger(Logger):
    def __init__(self) -> None:
        self.console = autogoal.logging.console()
        self.logger = autogoal.logging.logger()

    def begin(self, generations, pop_size):
        self.progress = Progress(console=self.console)
        self.pop_counter = self.progress.add_task("Generation", total=pop_size)
        self.total_counter = self.progress.add_task("Overall",
                                                    total=pop_size *
                                                    generations)
        self.progress.start()
        self.console.rule("Search starting", style="blue")

    def sample_solution(self, solution):
        self.progress.advance(self.pop_counter)
        self.progress.advance(self.total_counter)
        self.console.rule("Evaluating pipeline")
        self.console.print(repr(solution))

    def eval_solution(self, solution, fitness):
        self.console.print(Panel(f"📈 Fitness=[blue]{fitness:.3f}"))

    def error(self, e: Exception, solution):
        self.console.print(f"⚠️[red bold]Error:[/] {e}")

    def start_generation(self, generations, best_fn):
        self.console.rule(
            f"New generation - Remaining={generations} - Best={best_fn or 0:.3f}"
        )

    def start_generation(self, generations, best_fn):
        self.progress.update(self.pop_counter, completed=0)

    def update_best(self, new_best, new_fn, previous_best, previous_fn):
        self.console.print(
            Panel(
                f"🔥 Best improved from [red bold]{previous_fn or 0:.3f}[/] to [green bold]{new_fn:.3f}[/]"
            ))

    def end(self, best, best_fn):
        self.console.rule(f"Search finished")
        self.console.print(repr(best))
        self.console.print(Panel(f"🌟 Best=[green bold]{best_fn or 0:.3f}"))
        self.progress.stop()
        self.console.rule("Search finished", style="red")