Python mfold Examples

Example #1

File: rnatest.py Project: noellekimiko/HMC-Grader

 def testMfold_1(self):
     test1 = "AAGUUAUUCCAGCAGAAACAGGGCAAGAAACAGCAUACUUUCUCUUAAAACUAGCAGGAAGAUGGCCAGUAAAGACAAUACAUACAGACAAUGGCAGCAAUUUCACCAGCGCUGCACUUA"
     self.assertEqual(hw.mfold(test1, {}), 46)

Example #2

 def testMfold_1(self):
     test1 = 'AAGUUAUUCCAGCAGAAACAGGGCAAGAAACAGCAUACUUUCUCUUAAAACUAGCAGGAAGAUGGCCAGUAAAGACAAUACAUACAGACAAUGGCAGCAAUUUCACCAGCGCUGCACUUA'
     self.assertEqual(hw.mfold(test1, {}), 46)

Example #3

File: rnatest.py Project: noellekimiko/HMC-Grader

 def testMfold_2(self):
     test2 = "AAGAUCUGGCCUUCCUGCAAGGGAAGGCGGAA"
     self.assertEqual(hw.mfold(test2, {}), 12)

Example #4

 def testMfold_2(self):
     test2 = 'AAGAUCUGGCCUUCCUGCAAGGGAAGGCGGAA'
     self.assertEqual(hw.mfold(test2, {}), 12)