Example #1
0
        def show_plot(grid,excursi):
          excursi.reshape(flex.grid(grid, grid))

          from matplotlib import pyplot as plt
          plt.figure()
          CS = plt.contour([i*0.2 for i in range(grid)],[i*0.2 for i in range(grid)], excursi.as_numpy_array())
          plt.clabel(CS, inline=1, fontsize=10, fmt="%6.3f")
          plt.title("Score as to beam likelihood")
          plt.scatter([0.1*(grid-1)],[0.1*(grid-1)],color='g',marker='o')
          plt.scatter([0.1*(grid-1)+0.2*MIN.x[0]] , [0.1*(grid-1)+0.2*MIN.x[1]],color='r',marker='*')
          plt.axes().set_aspect("equal")
          plt.show()
Example #2
0
        def show_plot(grid,excursi):
          excursi.reshape(flex.grid(grid, grid))

          from matplotlib import pyplot as plt
          plt.figure()
          CS = plt.contour([i*0.2 for i in xrange(grid)],[i*0.2 for i in xrange(grid)], excursi.as_numpy_array())
          plt.clabel(CS, inline=1, fontsize=10, fmt="%6.3f")
          plt.title("Score as to beam likelihood")
          plt.scatter([0.1*(grid-1)],[0.1*(grid-1)],color='g',marker='o')
          plt.scatter([0.1*(grid-1)+0.2*MIN.x[0]] , [0.1*(grid-1)+0.2*MIN.x[1]],color='r',marker='*')
          plt.axes().set_aspect("equal")
          plt.show()
Example #3
0
        def show_plot(widegrid,excursi):
          excursi.reshape(flex.grid(widegrid, widegrid))

          def igrid(x): return x - (widegrid//2)
          from matplotlib import pyplot as plt
          plt.figure()
          CS = plt.contour([igrid(i)*plot_px_sz for i in range(widegrid)],
                           [igrid(i)*plot_px_sz for i in range(widegrid)], excursi.as_numpy_array())
          plt.clabel(CS, inline=1, fontsize=10, fmt="%6.3f")
          plt.title("Wide scope search for detector origin offset")
          plt.scatter([0.0],[0.0],color='g',marker='o')
          plt.scatter([0.2*MIN.x[0]] , [0.2*MIN.x[1]],color='r',marker='*')
          plt.axes().set_aspect("equal")
          plt.xlabel("offset (mm) along beamr1 vector")
          plt.ylabel("offset (mm) along beamr2 vector")
          plt.show()
Example #4
0
        def show_plot(widegrid,excursi):
          excursi.reshape(flex.grid(widegrid, widegrid))

          def igrid(x): return x - (widegrid//2)
          from matplotlib import pyplot as plt
          plt.figure()
          CS = plt.contour([igrid(i)*plot_px_sz for i in xrange(widegrid)],
                           [igrid(i)*plot_px_sz for i in xrange(widegrid)], excursi.as_numpy_array())
          plt.clabel(CS, inline=1, fontsize=10, fmt="%6.3f")
          plt.title("Wide scope search for detector origin offset")
          plt.scatter([0.0],[0.0],color='g',marker='o')
          plt.scatter([0.2*MIN.x[0]] , [0.2*MIN.x[1]],color='r',marker='*')
          plt.axes().set_aspect("equal")
          plt.xlabel("offset (mm) along beamr1 vector")
          plt.ylabel("offset (mm) along beamr2 vector")
          plt.show()