def test_run(self):
        function = AshRasterPopulationFunction.instance()

        hazard_path = standard_data_path('hazard', 'ash_raster_wgs84.tif')
        exposure_path = standard_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')
        # We need clipping for both layers to be in the same dimension
        clipped_hazard, clipped_exposure = clip_layers(
            hazard_path, exposure_path)

        hazard_layer = read_layer(clipped_hazard.source())
        exposure_layer = read_layer(clipped_exposure.source())

        # Let's set the extent to the hazard extent
        function.hazard = SafeLayer(hazard_layer)
        function.exposure = SafeLayer(exposure_layer)
        function.run()
        impact = function.impact
        expected = [
            [u'Population in very low hazard zone', 0],
            [u'Population in medium hazard zone', 1374],
            [u'Population in high hazard zone', 20],
            [u'Population in very high hazard zone', 0],
            [u'Population in low hazard zone', 8443],
            [u'Total affected population', 9837],
            [u'Unaffected population', 0],
            [u'Total population', 9837],
            [u'Population needing evacuation <sup>1</sup>', 9837]
        ]
        self.assertListEqual(
            expected, impact.impact_data['impact summary']['fields'])
    def test_run(self):
        """TestPagerEarthquakeFatalityFunction: Test running the IF."""
        eq_path = test_data_path('hazard', 'earthquake.tif')
        population_path = test_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        #  same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(
            str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(
            str(clipped_exposure.source()))

        impact_function = PAGFatalityFunction.instance()
        impact_function.hazard = eq_layer
        impact_function.exposure = population_layer
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = ('In the event of earthquake how many '
                             'population might die or be displaced according '
                             'pager model')
        message = 'The question should be %s, but it returns %s' % (
            expected_question, impact_function.question)
        self.assertEqual(expected_question, impact_function.question, message)

        expected_exposed_per_mmi = {
            2.0: 0,
            2.5: 0,
            3.0: 0,
            3.5: 0,
            4.0: 0,
            4.5: 0,
            5.0: 0,
            5.5: 0,
            6.5: 0,
            6.0: 0,
            7.0: 0,
            7.5: 60,
            8.0: 140,
            8.5: 0,
            9.0: 0,
            9.5: 0}
        result = impact_layer.get_keywords('exposed_per_mmi')

        message = 'Expecting %s, but it returns %s' % (
            expected_exposed_per_mmi, result)
        self.assertEqual(expected_exposed_per_mmi, result, message)
Example #3
0
    def test_run(self):
        """TestPagerEarthquakeFatalityFunction: Test running the IF."""
        eq_path = test_data_path('hazard', 'earthquake.tif')
        population_path = test_data_path('exposure',
                                         'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        #  same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(str(clipped_exposure.source()))

        impact_function = PAGFatalityFunction.instance()
        impact_function.hazard = eq_layer
        impact_function.exposure = population_layer
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = ('In the event of earthquake how many '
                             'population might die or be displaced according '
                             'pager model')
        message = 'The question should be %s, but it returns %s' % (
            expected_question, impact_function.question)
        self.assertEqual(expected_question, impact_function.question, message)

        expected_exposed_per_mmi = {
            2.0: 0,
            2.5: 0,
            3.0: 0,
            3.5: 0,
            4.0: 0,
            4.5: 0,
            5.0: 0,
            5.5: 0,
            6.5: 0,
            6.0: 0,
            7.0: 0,
            7.5: 60,
            8.0: 140,
            8.5: 0,
            9.0: 0,
            9.5: 0
        }
        result = impact_layer.get_keywords('exposed_per_mmi')

        message = 'Expecting %s, but it returns %s' % (
            expected_exposed_per_mmi, result)
        self.assertEqual(expected_exposed_per_mmi, result, message)
    def test_run(self):
        function = TsunamiEvacuationFunction.instance()

        hazard_path = test_data_path('hazard', 'tsunami_wgs84.tif')
        exposure_path = test_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')
        # We need clipping for both layers to be in the same dimension
        clipped_hazard, clipped_exposure = clip_layers(
            hazard_path, exposure_path)

        hazard_layer = read_layer(clipped_hazard.source())
        exposure_layer = read_layer(clipped_exposure.source())

        # Let's set the extent to the hazard extent
        function.parameters['thresholds'].value = [0.7, 0.8, 0.9]
        function.hazard = SafeLayer(hazard_layer)
        function.exposure = SafeLayer(exposure_layer)
        function.run()
        impact = function.impact

        # Count of flooded objects is calculated "by the hands"
        # print "keywords", keywords
        keywords = impact.get_keywords()
        evacuated = float(keywords['evacuated'])
        total_needs_full = keywords['total_needs']
        total_needs_weekly = OrderedDict([
            [x['table name'], x['amount']] for x in
            total_needs_full['weekly']
        ])
        total_needs_single = OrderedDict([
            [x['table name'], x['amount']] for x in
            total_needs_full['single']
        ])

        # #FIXME: This doesn't make sense due to clipping above. Update
        # clip_layers
        expected_evacuated = 1198
        self.assertEqual(evacuated, expected_evacuated)
        self.assertEqual(total_needs_weekly['Rice [kg]'], 3355)
        self.assertEqual(total_needs_weekly['Family Kits'], 240)
        self.assertEqual(total_needs_weekly['Drinking Water [l]'], 20965)
        self.assertEqual(total_needs_weekly['Clean Water [l]'], 80266)
        self.assertEqual(total_needs_single['Toilets'], 60)
Example #5
0
    def test_run(self):
        function = TsunamiEvacuationFunction.instance()

        hazard_path = test_data_path('hazard', 'tsunami_wgs84.tif')
        exposure_path = test_data_path('exposure',
                                       'pop_binary_raster_20_20.asc')
        # We need clipping for both layers to be in the same dimension
        clipped_hazard, clipped_exposure = clip_layers(hazard_path,
                                                       exposure_path)

        hazard_layer = read_layer(clipped_hazard.source())
        exposure_layer = read_layer(clipped_exposure.source())

        # Let's set the extent to the hazard extent
        function.parameters['thresholds'].value = [0.7, 0.8, 0.9]
        function.hazard = SafeLayer(hazard_layer)
        function.exposure = SafeLayer(exposure_layer)
        function.run()
        impact = function.impact

        # Count of flooded objects is calculated "by the hands"
        # print "keywords", keywords
        keywords = impact.get_keywords()
        evacuated = float(keywords['evacuated'])
        total_needs_full = keywords['total_needs']
        total_needs_weekly = OrderedDict([[x['table name'], x['amount']]
                                          for x in total_needs_full['weekly']])
        total_needs_single = OrderedDict([[x['table name'], x['amount']]
                                          for x in total_needs_full['single']])

        # #FIXME: This doesn't make sense due to clipping above. Update
        # clip_layers
        expected_evacuated = 1198
        self.assertEqual(evacuated, expected_evacuated)
        self.assertEqual(total_needs_weekly['Rice [kg]'], 3355)
        self.assertEqual(total_needs_weekly['Family Kits'], 240)
        self.assertEqual(total_needs_weekly['Drinking Water [l]'], 20965)
        self.assertEqual(total_needs_weekly['Clean Water [l]'], 80266)
        self.assertEqual(total_needs_single['Toilets'], 60)
    def test_parameter(self):
        """Test for checking parameter is carried out"""
        eq_path = standard_data_path('hazard', 'earthquake.tif')
        population_path = standard_data_path('exposure',
                                             'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        # same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(str(clipped_exposure.source()))

        impact_function = ITBBayesianFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)

        expected = {
            'postprocessors': {
                'Age': {
                    'Age': {
                        'Adult ratio': 0.659,
                        'Elderly ratio': 0.078,
                        'Youth ratio': 0.263
                    }
                },
                'Gender': {
                    'Gender': True
                },
                'MinimumNeeds': {
                    'MinimumNeeds': True
                }
            }
        }
        self.assertDictEqual(expected, impact_function.parameters_value())
    def test_parameter(self):
        """Test for checking parameter is carried out"""
        eq_path = standard_data_path('hazard', 'earthquake.tif')
        population_path = standard_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        # same dimension
        clipped_hazard, clipped_exposure = clip_layers(
            eq_path, population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(
            str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(
            str(clipped_exposure.source()))

        impact_function = ITBBayesianFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)

        expected = {
            'postprocessors': {
                'Age': {
                    'Age': {
                        'Adult ratio': 0.659,
                        'Elderly ratio': 0.078,
                        'Youth ratio': 0.263
                    }
                },
            'Gender': {'Gender': True},
            'MinimumNeeds': {'MinimumNeeds': True}
            }
        }
        self.assertDictEqual(expected, impact_function.parameters_value())
    def test_run(self):
        """TestITBBayesianEarthquakeFatalityFunction: Test running the IF."""
        # FIXME(Hyeuk): test requires more realistic hazard and population data
        eq_path = standard_data_path('hazard', 'earthquake.tif')
        population_path = standard_data_path('exposure',
                                             'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        #  same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(str(clipped_exposure.source()))

        impact_function = ITBBayesianFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = (
            'In the event of earthquake how many population might die or '
            'be displaced according itb bayesian model?')
        self.assertEqual(expected_question, impact_function.question)

        expected_result = {
            'total_population': 200,
            'total_fatalities': 0,
            'total_displaced': 200
        }
        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            message = 'Expecting %s, but it returns %s' % (
                expected_result[key_], result)
            self.assertEqual(expected_result[key_], result, message)

        expected_result = {}
        expected_result['exposed_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 200,
            9: 0,
            10: 0
        }
        expected_result['displaced_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 199.6297,  # FIXME should be 200.0
            9: 0,
            10: 0
        }

        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            for item in expected_result[key_].keys():
                message = 'Expecting %s, but it returns %s' % (
                    expected_result[key_][item], result[item])
                self.assertAlmostEqual(expected_result[key_][item],
                                       result[item],
                                       places=4,
                                       msg=message)

        expected_result = [100.0, 0.0, 0.0, 0.0, 0.0, 0.0]
        result = impact_layer.get_keywords('prob_fatality_mag')
        message = 'Expecting %s, but it returns %s' % (expected_result, result)
        self.assertEqual(expected_result, result, message)
    def test_run(self):
        """TestITBBayesianEarthquakeFatalityFunction: Test running the IF."""
        # FIXME(Hyeuk): test requires more realistic hazard and population data
        eq_path = test_data_path('hazard', 'earthquake.tif')
        population_path = test_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        #  same dimension
        clipped_hazard, clipped_exposure = clip_layers(
            eq_path, population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(
            str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(
            str(clipped_exposure.source()))

        impact_function = ITBBayesianFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = (
            'In the event of earthquake how many population might die or '
            'be displaced according itb bayesian model')
        message = 'The question should be %s, but it returns %s' % (
            expected_question, impact_function.question)
        self.assertEqual(expected_question, impact_function.question, message)

        expected_result = {
            'total_population': 200,
            'total_fatalities': 0,
            'total_displaced': 200
        }
        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            message = 'Expecting %s, but it returns %s' % (
                expected_result[key_], result)
            self.assertEqual(expected_result[key_], result, message)

        expected_result = {}
        expected_result['exposed_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 200,
            9: 0,
            10: 0
        }
        expected_result['displaced_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 199.6297,  # FIXME should be 200.0
            9: 0,
            10: 0
        }

        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            for item in expected_result[key_].keys():
                message = 'Expecting %s, but it returns %s' % (
                    expected_result[key_][item], result[item])
                self.assertAlmostEqual(
                    expected_result[key_][item],
                    result[item], places=4, msg=message)

        expected_result = [
            100.0, 0.0, 0.0, 0.0, 0.0, 0.0]
        result = impact_layer.get_keywords('prob_fatality_mag')
        message = 'Expecting %s, but it returns %s' % (
            expected_result, result)
        self.assertEqual(expected_result, result, message)
Example #10
0
    def test_run(self):
        """TestITEarthquakeFatalityFunction: Test running the IF."""
        # FIXME(Hyeuk): test requires more realistic hazard and population data
        eq_path = standard_data_path('hazard', 'earthquake.tif')
        population_path = standard_data_path('exposure',
                                             'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        # same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(str(clipped_exposure.source()))

        impact_function = ITBFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = (
            'In the event of earthquake how many population might die or be '
            'displaced?')
        self.assertEqual(expected_question, impact_function.question)

        expected_result = {
            'total_population': 200,
            'total_fatalities': 0,  # should be zero FIXME
            'total_displaced': 200
        }
        for key in expected_result.keys():
            result = impact_layer.get_keywords(key)
            self.assertEqual(expected_result[key], result)

        expected_result = {}
        expected_result['fatalities_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 0.17778,
            9: 0,
            10: 0
        }
        expected_result['exposed_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 200,
            9: 0,
            10: 0
        }
        expected_result['displaced_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 199.82221,
            9: 0,
            10: 0
        }

        for key in expected_result.keys():
            result = impact_layer.get_keywords(key)
            for item in expected_result[key].keys():
                self.assertAlmostEqual(expected_result[key][item],
                                       result[item],
                                       places=4)

        expected_result = None
        result = impact_layer.get_keywords('prob_fatality_mag')
        self.assertEqual(expected_result, result)

        self.assertEqual(numpy.nansum(impact_layer.data), 200)
    def test_run(self):
        """TestITEarthquakeFatalityFunction: Test running the IF."""
        # FIXME(Hyeuk): test requires more realistic hazard and population data
        eq_path = test_data_path('hazard', 'earthquake.tif')
        population_path = test_data_path(
            'exposure', 'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        # same dimension
        clipped_hazard, clipped_exposure = clip_layers(
            eq_path, population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(
            str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(
            str(clipped_exposure.source()))

        impact_function = ITBFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = (
            'In the event of earthquake how many population might die or be '
            'displaced')
        self.assertEqual(expected_question, impact_function.question)

        expected_result = {
            'total_population': 200,
            'total_fatalities': 0,  # should be zero FIXME
            'total_displaced': 200
        }
        for key in expected_result.keys():
            result = impact_layer.get_keywords(key)
            self.assertEqual(expected_result[key], result)

        expected_result = {}
        expected_result['fatalities_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 0.17778,
            9: 0,
            10: 0
        }
        expected_result['exposed_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 200,
            9: 0,
            10: 0
        }
        expected_result['displaced_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 199.82221,
            9: 0,
            10: 0
        }

        for key in expected_result.keys():
            result = impact_layer.get_keywords(key)
            for item in expected_result[key].keys():
                self.assertAlmostEqual(
                    expected_result[key][item], result[item], places=4)

        expected_result = None
        result = impact_layer.get_keywords('prob_fatality_mag')
        self.assertEqual(expected_result, result)

        self.assertEqual(numpy.nansum(impact_layer.data), 200)
Example #12
0
    def test_run(self):
        """TestPagerEarthquakeFatalityFunction: Test running the IF."""
        # FIXME(Hyeuk): test requires more realistic hazard and population data
        eq_path = test_data_path('hazard', 'earthquake.tif')
        population_path = test_data_path('exposure',
                                         'pop_binary_raster_20_20.asc')

        # For EQ on Pops we need to clip the hazard and exposure first to the
        #  same dimension
        clipped_hazard, clipped_exposure = clip_layers(eq_path,
                                                       population_path)

        # noinspection PyUnresolvedReferences
        eq_layer = read_layer(str(clipped_hazard.source()))
        # noinspection PyUnresolvedReferences
        population_layer = read_layer(str(clipped_exposure.source()))

        impact_function = PAGFatalityFunction.instance()
        impact_function.hazard = SafeLayer(eq_layer)
        impact_function.exposure = SafeLayer(population_layer)
        impact_function.run()
        impact_layer = impact_function.impact
        # Check the question
        expected_question = (
            'In the event of earthquake how many population might die or '
            'be displaced according pager model')
        message = 'The question should be %s, but it returns %s' % (
            expected_question, impact_function.question)
        self.assertEqual(expected_question, impact_function.question, message)

        expected_result = {
            'total_population': 200,
            'total_fatalities': 0,  # should be zero FIXME
            'total_displaced': 200
        }
        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            message = 'Expecting %s, but it returns %s' % (
                expected_result[key_], result)
            self.assertEqual(expected_result[key_], result, message)

        expected_result = {}
        expected_result['fatalities_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 0.083498,  # FIXME should be rounded to zero!! not 10.
            9: 0,
            10: 0
        }
        expected_result['exposed_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 200,
            9: 0,
            10: 0
        }
        expected_result['displaced_per_mmi'] = {
            2: 0,
            3: 0,
            4: 0,
            5: 0,
            6: 0,
            7: 0,
            8: 199.91650,  # FIXME should be 200.0
            9: 0,
            10: 0
        }

        for key_ in expected_result.keys():
            result = impact_layer.get_keywords(key_)
            for item in expected_result[key_].keys():
                message = 'Expecting %s, but it returns %s' % (
                    expected_result[key_][item], result[item])
                self.assertAlmostEqual(expected_result[key_][item],
                                       result[item],
                                       places=4,
                                       msg=message)

        # expected_result = [
        #    8.0, 42.0, 42.0, 8.0, 0.0, 0.0, 0.0] # corresponds to 10
        expected_result = [100.0, 0.0, 0.0, 0.0, 0.0, 0.0,
                           0.0]  # corresponds to <= 1
        result = impact_function.compute_probability(
            impact_layer.get_keywords('total_fatalities_raw'))
        message = 'Expecting %s, but it returns %s' % (expected_result, result)
        self.assertEqual(expected_result, result, message)