Python CoreDb._collect_standard_annotations Examples

Example #1

File: test_db.py Project: PennChopMicrobiomeProgram/SampleRegistry

 def test_collect_standard_annotations(self):
     a = [
         (1, "SampleType", "a"),
         (1, "HostSpecies", "b"),
         (2, "SubjectID", "c"),
         ]
     obs = CoreDb._collect_standard_annotations(a)
     self.assertEqual(obs, {1: ["a", None, "b"], 2: [None, "c", None]})

Example #2

File: test_db.py Project: zhaoc1/SampleRegistry

 def test_collect_standard_annotations(self):
     a = [
         (1, "SampleType", "a"),
         (1, "HostSpecies", "b"),
         (2, "SubjectID", "c"),
     ]
     obs = CoreDb._collect_standard_annotations(a)
     self.assertEqual(obs, {1: ["a", None, "b"], 2: [None, "c", None]})