def set_slicer(self, type, params):
"""
Rebuild the panel
"""
self.bck.Clear(True)
self.type = type
if type == None:
label = "Right-click on 2D plot for slicer options"
title = wx.StaticText(self, -1, label, style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL, border=15)
else:
title_text = str(type) + "Parameters"
title = wx.StaticText(self, -1, title_text,
style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL, border=15)
n = 1
self.parameters = []
keys = params.keys()
keys.sort()
for item in keys:
if not item.lower() in ["num_points", "avg", "avg_error", "sum", "sum_error"]:
n += 1
text = wx.StaticText(self, -1, item, style=wx.ALIGN_LEFT)
self.bck.Add(text, (n - 1, 0),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL, border=15)
ctl = wx.TextCtrl(self, -1, size=(80, 20),
style=wx.TE_PROCESS_ENTER)
hint_msg = "Modify the value of %s to change " % item
hint_msg += "the 2D slicer"
ctl.SetToolTipString(hint_msg)
ctl.SetValue(str(format_number(params[item])))
self.Bind(wx.EVT_TEXT_ENTER, self.onTextEnter)
ctl.Bind(wx.EVT_SET_FOCUS, self.onSetFocus)
ctl.Bind(wx.EVT_KILL_FOCUS, self.onTextEnter)
self.parameters.append([item, ctl])
self.bck.Add(ctl, (n - 1, 1), flag=wx.TOP | wx.BOTTOM, border=0)
for item in keys:
if item.lower() in ["num_points", "avg", "avg_error", "sum", "sum_error"]:
n += 1
text = wx.StaticText(self, -1, item + ": ", style=wx.ALIGN_LEFT)
self.bck.Add(text, (n - 1, 0), flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
ctl = wx.StaticText(self, -1,
str(format_number(params[item])),
style=wx.ALIGN_LEFT)
ctl.SetToolTipString("Result %s" % item)
self.bck.Add(ctl, (n - 1, 1), flag=wx.TOP | wx.BOTTOM, border=0)
self.bck.Layout()
self.Layout()
psizer = self.parent.GetSizer()
if psizer != None:
psizer.Layout()
def calculateSld(self, event):
"""
Calculate the neutron scattering density length of a molecule
"""
self.clear_outputs()
try:
#Check validity user inputs
flag, msg = self.check_inputs()
if self.base is not None and msg.lstrip().rstrip() != "":
msg = "SLD Calculator: %s" % str(msg)
wx.PostEvent(self.base, StatusEvent(status=msg))
if not flag:
return
#get ready to compute
self.sld_formula = formula(self.compound, density=self.density)
(sld_real, sld_im, _), (_, absorp, incoh), \
length = neutron_scattering(compound=self.compound,
density=self.density,
wavelength=self.wavelength)
cu_real, cu_im = self.calculate_sld_helper(
element="Cu",
density=self.density,
molecule_formula=self.sld_formula)
mo_real, mo_im = self.calculate_sld_helper(
element="Mo",
density=self.density,
molecule_formula=self.sld_formula)
# set neutron sld values
val = format_number(sld_real * _SCALE)
self.neutron_sld_real_ctl.SetValue(val)
val = format_number(math.fabs(sld_im) * _SCALE)
self.neutron_sld_im_ctl.SetValue(val)
# Compute the Cu SLD
self.cu_ka_sld_real_ctl.SetValue(format_number(cu_real * _SCALE))
val = format_number(math.fabs(cu_im) * _SCALE)
self.cu_ka_sld_im_ctl.SetValue(val)
# Compute the Mo SLD
self.mo_ka_sld_real_ctl.SetValue(format_number(mo_real * _SCALE))
val = format_number(math.fabs(mo_im) * _SCALE)
self.mo_ka_sld_im_ctl.SetValue(val)
# set incoherence and absorption
self.neutron_inc_ctl.SetValue(format_number(incoh))
self.neutron_abs_ctl.SetValue(format_number(absorp))
# Neutron length
self.neutron_length_ctl.SetValue(format_number(length))
# display wavelength
self.wavelength_ctl.SetValue(str(self.wavelength))
except:
if self.base is not None:
msg = "SLD Calculator: %s" % (sys.exc_value)
wx.PostEvent(self.base, StatusEvent(status=msg))
if event is not None:
event.Skip()
def set_slicer(self, type, params):
"""
Rebuild the panel
"""
self.bck.Clear(True)
self.type = type
if type == None:
label = "Right-click on 2D plot for slicer options"
title = wx.StaticText(self, -1, label, style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2), flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL, border=15)
else:
title = wx.StaticText(self, -1, "Slicer Parameters", style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2), flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL, border=15)
ix = 0
iy = 0
self.parameters = []
keys = params.keys()
keys.sort()
for item in keys:
iy += 1
ix = 0
if not item in ["count", "errors"]:
text = wx.StaticText(self, -1, item, style=wx.ALIGN_LEFT)
self.bck.Add(text, (iy, ix), (1, 1), wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
ctl = wx.TextCtrl(self, -1, size=(80, 20), style=wx.TE_PROCESS_ENTER)
hint_msg = "Modify the value of %s to change" % item
hint_msg += " the 2D slicer"
ctl.SetToolTipString(hint_msg)
ix = 1
ctl.SetValue(format_number(str(params[item])))
self.Bind(wx.EVT_TEXT_ENTER, self.onTextEnter)
self.parameters.append([item, ctl])
self.bck.Add(ctl, (iy, ix), (1, 1), wx.EXPAND | wx.ADJUST_MINSIZE, 0)
ix = 3
self.bck.Add((20, 20), (iy, ix), (1, 1), wx.EXPAND | wx.ADJUST_MINSIZE, 0)
else:
text = wx.StaticText(self, -1, item + " : ", style=wx.ALIGN_LEFT)
self.bck.Add(text, (iy, ix), (1, 1), wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
ctl = wx.StaticText(self, -1, format_number(str(params[item])), style=wx.ALIGN_LEFT)
ix = 1
self.bck.Add(ctl, (iy, ix), (1, 1), wx.EXPAND | wx.ADJUST_MINSIZE, 0)
iy += 1
ix = 1
self.bck.Add((20, 20), (iy, ix), (1, 1), wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
self.bck.Layout()
self.bck.Fit(self)
self.parent.GetSizer().Layout()
def calculateSld(self, event):
"""
Calculate the neutron scattering density length of a molecule
"""
self.clear_outputs()
try:
#Check validity user inputs
flag, msg = self.check_inputs()
if self.base is not None and msg.lstrip().rstrip() != "":
msg = "SLD Calculator: %s" % str(msg)
wx.PostEvent(self.base, StatusEvent(status=msg))
if not flag:
return
#get ready to compute
self.sld_formula = formula(self.compound,
density=self.density)
(sld_real, sld_im, _), (_, absorp, incoh), \
length = neutron_scattering(compound=self.compound,
density=self.density,
wavelength=self.wavelength)
cu_real, cu_im = self.calculate_sld_helper(element="Cu",
density=self.density,
molecule_formula=self.sld_formula)
mo_real, mo_im = self.calculate_sld_helper(element="Mo",
density=self.density,
molecule_formula=self.sld_formula)
# set neutron sld values
val = format_number(sld_real * _SCALE)
self.neutron_sld_real_ctl.SetValue(val)
val = format_number(math.fabs(sld_im) * _SCALE)
self.neutron_sld_im_ctl.SetValue(val)
# Compute the Cu SLD
self.cu_ka_sld_real_ctl.SetValue(format_number(cu_real * _SCALE))
val = format_number(math.fabs(cu_im) * _SCALE)
self.cu_ka_sld_im_ctl.SetValue(val)
# Compute the Mo SLD
self.mo_ka_sld_real_ctl.SetValue(format_number(mo_real * _SCALE))
val = format_number(math.fabs(mo_im) * _SCALE)
self.mo_ka_sld_im_ctl.SetValue(val)
# set incoherence and absorption
self.neutron_inc_ctl.SetValue(format_number(incoh))
self.neutron_abs_ctl.SetValue(format_number(absorp))
# Neutron length
self.neutron_length_ctl.SetValue(format_number(length))
# display wavelength
self.wavelength_ctl.SetValue(str(self.wavelength))
except:
if self.base is not None:
msg = "SLD Calculator: %s" % (sys.exc_value)
wx.PostEvent(self.base, StatusEvent(status=msg))
if event is not None:
event.Skip()
def onParamChange(self, evt):
"""
Receive and event and reset the text field contained in self.parameters
"""
evt.Skip()
for item in self.parameters:
if item[0] in evt.params:
item[1].SetValue(format_number(evt.params[item[0]]))
item[1].Refresh()
def onParamChange(self, evt):
"""
Receive and event and reset the text field contained in self.parameters
"""
evt.Skip()
for item in self.parameters:
if item[0] in evt.params:
item[1].SetValue(format_number(evt.params[item[0]]))
item[1].Refresh()
def setContent(self,
xnpts,
ynpts,
qmax,
beam,
zmin=None,
zmax=None,
sym=False):
"""
received value and displayed them
:param xnpts: the number of point of the x_bins of data
:param ynpts: the number of point of the y_bins of data
:param qmax: the maxmimum value of data pixel
:param beam: the radius of the beam
:param zmin: the value to get the minimum color
:param zmax: the value to get the maximum color
:param sym:
"""
self.xnpts_ctl.SetLabel(str(format_number(xnpts)))
self.ynpts_ctl.SetLabel(str(format_number(ynpts)))
self.qmax_ctl.SetLabel(str(format_number(qmax)))
self.beam_ctl.SetLabel(str(format_number(beam)))
if zmin != None:
self.zmin_ctl.SetValue(str(format_number(zmin)))
if zmax != None:
self.zmax_ctl.SetValue(str(format_number(zmax)))
def set_values(self):
"""
Set value of txtcrtl
"""
value = format_number(self.qstar_container.qstar)
self.invariant_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_err)
self.invariant_err_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_low)
self.invariant_low_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_low_err)
self.invariant_low_err_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_high)
self.invariant_high_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_high_err)
self.invariant_high_err_tcl.SetValue(value)
def set_values(self):
"""
Set value of txtcrtl
"""
value = format_number(self.qstar_container.qstar)
self.invariant_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_err)
self.invariant_err_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_low)
self.invariant_low_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_low_err)
self.invariant_low_err_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_high)
self.invariant_high_tcl.SetValue(value)
value = format_number(self.qstar_container.qstar_high_err)
self.invariant_high_err_tcl.SetValue(value)
def setContent(self, xnpts, ynpts, qmax, beam,
zmin=None, zmax=None, sym=False):
"""
received value and displayed them
:param xnpts: the number of point of the x_bins of data
:param ynpts: the number of point of the y_bins of data
:param qmax: the maxmimum value of data pixel
:param beam: the radius of the beam
:param zmin: the value to get the minimum color
:param zmax: the value to get the maximum color
:param sym:
"""
self.xnpts_ctl.SetLabel(str(format_number(xnpts)))
self.ynpts_ctl.SetLabel(str(format_number(ynpts)))
self.qmax_ctl.SetLabel(str(format_number(qmax)))
self.beam_ctl.SetLabel(str(format_number(beam)))
if zmin != None:
self.zmin_ctl.SetValue(str(format_number(zmin)))
if zmax != None:
self.zmax_ctl.SetValue(str(format_number(zmax)))
def set_slicer(self, type, params):
"""
Rebuild the panel
"""
self.bck.Clear(True)
self.type = type
if type == None:
label = "Right-click on 2D plot for slicer options"
title = wx.StaticText(self, -1, label, style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
else:
title_text = str(type) + "Parameters"
title = wx.StaticText(self, -1, title_text, style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
n = 1
self.parameters = []
keys = params.keys()
keys.sort()
for item in keys:
if not item.lower() in [
"num_points", "avg", "avg_error", "sum", "sum_error"
]:
n += 1
text = wx.StaticText(self, -1, item, style=wx.ALIGN_LEFT)
self.bck.Add(text, (n - 1, 0),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
ctl = wx.TextCtrl(self,
-1,
size=(80, 20),
style=wx.TE_PROCESS_ENTER)
hint_msg = "Modify the value of %s to change " % item
hint_msg += "the 2D slicer"
ctl.SetToolTipString(hint_msg)
ctl.SetValue(str(format_number(params[item])))
self.Bind(wx.EVT_TEXT_ENTER, self.onTextEnter)
ctl.Bind(wx.EVT_SET_FOCUS, self.onSetFocus)
ctl.Bind(wx.EVT_KILL_FOCUS, self.onTextEnter)
self.parameters.append([item, ctl])
self.bck.Add(ctl, (n - 1, 1),
flag=wx.TOP | wx.BOTTOM,
border=0)
for item in keys:
if item.lower() in [
"num_points", "avg", "avg_error", "sum", "sum_error"
]:
n += 1
text = wx.StaticText(self,
-1,
item + ": ",
style=wx.ALIGN_LEFT)
self.bck.Add(text, (n - 1, 0),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
ctl = wx.StaticText(self,
-1,
str(format_number(params[item])),
style=wx.ALIGN_LEFT)
ctl.SetToolTipString("Result %s" % item)
self.bck.Add(ctl, (n - 1, 1),
flag=wx.TOP | wx.BOTTOM,
border=0)
self.bck.Layout()
self.Layout()
psizer = self.parent.GetSizer()
if psizer != None:
psizer.Layout()
def set_slicer(self, type, params):
"""
Rebuild the panel
"""
self.bck.Clear(True)
self.type = type
if type == None:
label = "Right-click on 2D plot for slicer options"
title = wx.StaticText(self, -1, label, style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
else:
title = wx.StaticText(self,
-1,
"Slicer Parameters",
style=wx.ALIGN_LEFT)
self.bck.Add(title, (0, 0), (1, 2),
flag=wx.LEFT | wx.ALIGN_CENTER_VERTICAL,
border=15)
ix = 0
iy = 0
self.parameters = []
keys = params.keys()
keys.sort()
for item in keys:
iy += 1
ix = 0
if not item in ["count", "errors"]:
text = wx.StaticText(self, -1, item, style=wx.ALIGN_LEFT)
self.bck.Add(text, (iy, ix), (1, 1),
wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
ctl = wx.TextCtrl(self,
-1,
size=(80, 20),
style=wx.TE_PROCESS_ENTER)
hint_msg = "Modify the value of %s to change" % item
hint_msg += " the 2D slicer"
ctl.SetToolTipString(hint_msg)
ix = 1
ctl.SetValue(format_number(str(params[item])))
self.Bind(wx.EVT_TEXT_ENTER, self.onTextEnter)
self.parameters.append([item, ctl])
self.bck.Add(ctl, (iy, ix), (1, 1),
wx.EXPAND | wx.ADJUST_MINSIZE, 0)
ix = 3
self.bck.Add((20, 20), (iy, ix), (1, 1),
wx.EXPAND | wx.ADJUST_MINSIZE, 0)
else:
text = wx.StaticText(self,
-1,
item + " : ",
style=wx.ALIGN_LEFT)
self.bck.Add(text, (iy, ix), (1, 1),
wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
ctl = wx.StaticText(self,
-1,
format_number(str(params[item])),
style=wx.ALIGN_LEFT)
ix = 1
self.bck.Add(ctl, (iy, ix), (1, 1),
wx.EXPAND | wx.ADJUST_MINSIZE, 0)
iy += 1
ix = 1
self.bck.Add((20, 20), (iy, ix), (1, 1),
wx.LEFT | wx.EXPAND | wx.ADJUST_MINSIZE, 15)
self.bck.Layout()
self.bck.Fit(self)
self.parent.GetSizer().Layout()
def on_paint(self, event):
"""
Draw the chart
"""
dc = wx.PaintDC(self.panel_chart)
try:
gc = wx.GraphicsContext.Create(dc)
except NotImplementedError:
msg = "This build of wxPython does not support "
msg += "the wx.GraphicsContext family of classes."
dc.DrawText(msg, 25, 25)
return
# Start the drawing
font = wx.SystemSettings.GetFont(wx.SYS_DEFAULT_GUI_FONT)
font.SetWeight(wx.BOLD)
gc.SetFont(font)
# Draw a rectangle
path = gc.CreatePath()
path.AddRectangle(-RECTANGLE_WIDTH / 2, -RECTANGLE_HEIGHT / 2,
RECTANGLE_WIDTH / 2, RECTANGLE_HEIGHT / 2)
x_origine = 20
y_origine = 15
# Draw low rectangle
gc.PushState()
label = "Q* from Low-Q "
PathFunc = gc.DrawPath
w, h = gc.GetTextExtent(label)
gc.DrawText(label, x_origine, y_origine)
# Translate the rectangle
x_center = x_origine + RECTANGLE_WIDTH * self.low_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
gc.SetPen(wx.Pen("black", 1))
gc.SetBrush(wx.Brush(self.extrapolation_color_low))
if self.low_inv_percent is None:
low_percent = 'Not Computed'
elif self.low_inv_percent == 'error':
low_percent = 'Error'
else:
low_percent = format_number(self.low_inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(low_percent, x_center, y_center)
# Increase width by self.low_scale
gc.Scale(self.low_scale, 1.0)
PathFunc(path)
gc.PopState()
# Draw rectangle for invariant
gc.PushState() # save it again
y_origine += 20
gc.DrawText("Q* from Data ", x_origine, y_origine)
# offset to the lower part of the window
x_center = x_origine + RECTANGLE_WIDTH * self.inv_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
# 128 == half transparent
gc.SetBrush(wx.Brush(self.invariant_color))
# Increase width by self.inv_scale
if self.inv_percent is None:
inv_percent = 'Not Computed'
elif self.inv_percent == 'error':
inv_percent = 'Error'
else:
inv_percent = format_number(self.inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(inv_percent, x_center, y_center)
gc.Scale(self.inv_scale, 1.0)
gc.DrawPath(path)
gc.PopState()
# restore saved state
# Draw rectangle for high invariant
gc.PushState()
y_origine += 20
gc.DrawText("Q* from High-Q ", x_origine, y_origine)
# define the position of the new rectangle
x_center = x_origine + RECTANGLE_WIDTH * self.high_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
gc.SetBrush(wx.Brush(self.extrapolation_color_high))
# increase scale by self.high_scale
if self.high_inv_percent is None:
high_percent = 'Not Computed'
elif self.high_inv_percent == 'error':
high_percent = 'Error'
else:
high_percent = format_number(self.high_inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(high_percent, x_center, y_center)
gc.Scale(self.high_scale, 1.0)
gc.DrawPath(path)
gc.PopState()
def on_paint(self, event):
"""
Draw the chart
"""
dc = wx.PaintDC(self.panel_chart)
try:
gc = wx.GraphicsContext.Create(dc)
except NotImplementedError:
msg = "This build of wxPython does not support "
msg += "the wx.GraphicsContext family of classes."
dc.DrawText(msg, 25, 25)
return
# Start the drawing
font = wx.SystemSettings.GetFont(wx.SYS_DEFAULT_GUI_FONT)
font.SetWeight(wx.BOLD)
gc.SetFont(font)
# Draw a rectangle
path = gc.CreatePath()
path.AddRectangle(-RECTANGLE_WIDTH / 2, -RECTANGLE_HEIGHT / 2,
RECTANGLE_WIDTH / 2, RECTANGLE_HEIGHT / 2)
x_origine = 20
y_origine = 15
# Draw low rectangle
gc.PushState()
label = "Q* from Low-Q "
PathFunc = gc.DrawPath
w, h = gc.GetTextExtent(label)
gc.DrawText(label, x_origine, y_origine)
# Translate the rectangle
x_center = x_origine + RECTANGLE_WIDTH * self.low_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
gc.SetPen(wx.Pen("black", 1))
gc.SetBrush(wx.Brush(self.extrapolation_color_low))
if self.low_inv_percent is None:
low_percent = 'Not Computed'
elif self.low_inv_percent == 'error':
low_percent = 'Error'
else:
low_percent = format_number(self.low_inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(low_percent, x_center, y_center)
# Increase width by self.low_scale
gc.Scale(self.low_scale, 1.0)
PathFunc(path)
gc.PopState()
# Draw rectangle for invariant
gc.PushState() # save it again
y_origine += 20
gc.DrawText("Q* from Data ", x_origine, y_origine)
# offset to the lower part of the window
x_center = x_origine + RECTANGLE_WIDTH * self.inv_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
# 128 == half transparent
gc.SetBrush(wx.Brush(self.invariant_color))
# Increase width by self.inv_scale
if self.inv_percent is None:
inv_percent = 'Not Computed'
elif self.inv_percent == 'error':
inv_percent = 'Error'
else:
inv_percent = format_number(self.inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(inv_percent, x_center, y_center)
gc.Scale(self.inv_scale, 1.0)
gc.DrawPath(path)
gc.PopState()
# restore saved state
# Draw rectangle for high invariant
gc.PushState()
y_origine += 20
gc.DrawText("Q* from High-Q ", x_origine, y_origine)
# define the position of the new rectangle
x_center = x_origine + RECTANGLE_WIDTH * self.high_scale / 2 + w + 10
y_center = y_origine + h
gc.Translate(x_center, y_center)
gc.SetBrush(wx.Brush(self.extrapolation_color_high))
# increase scale by self.high_scale
if self.high_inv_percent is None:
high_percent = 'Not Computed'
elif self.high_inv_percent == 'error':
high_percent = 'Error'
else:
high_percent = format_number(self.high_inv_percent * 100) + '%'
x_center = 20
y_center = -h
gc.DrawText(high_percent, x_center, y_center)
gc.Scale(self.high_scale, 1.0)
gc.DrawPath(path)
gc.PopState()
def __str__(self):
"""
Pretty print
: return: string representing the state
"""
# Input string
compute_num = self.saved_state['compute_num']
compute_state = self.state_list[str(compute_num)]
my_time, date = self.timestamp
file_name = self.file
state_num = int(self.saved_state['state_num'])
state = "\n[Invariant computation for %s: " % file_name
state += "performed at %s on %s] \n" % (my_time, date)
state += "State No.: %d \n" % state_num
state += "\n=== Inputs ===\n"
# text ctl general inputs ( excluding extrapolation text ctl)
for key, value in self.input_list.iteritems():
if value == '':
continue
key_split = key.split('_')
max_ind = len(key_split) - 1
if key_split[max_ind] == 'tcl':
name = ""
if key_split[1] == 'low' or key_split[1] == 'high':
continue
for ind in range(0, max_ind):
name += " %s" % key_split[ind]
state += "%s: %s\n" % (name.lstrip(" "), value)
# other input parameters
extra_lo = compute_state['enable_low_cbox']
if compute_state['enable_low_cbox']:
if compute_state['guinier']:
extra_lo = 'Guinier'
else:
extra_lo = 'Power law'
extra_hi = compute_state['enable_high_cbox']
if compute_state['enable_high_cbox']:
extra_hi = 'Power law'
state += "\nExtrapolation: High=%s; Low=%s\n" % (extra_hi, extra_lo)
low_off = False
high_off = False
for key, value in self.input_list.iteritems():
key_split = key.split('_')
max_ind = len(key_split) - 1
if key_split[max_ind] == 'tcl':
name = ""
# check each buttons whether or not ON or OFF
if key_split[1] == 'low' or key_split[1] == 'high':
if not compute_state['enable_low_cbox'] and \
key_split[max_ind - 1] == 'low':
low_off = True
continue
elif not compute_state['enable_high_cbox'] and \
key_split[max_ind - 1] == 'high':
high_off = True
continue
elif extra_lo == 'Guinier' and key_split[0] == 'power' and \
key_split[max_ind - 1] == 'low':
continue
for ind in range(0, max_ind):
name += " %s" % key_split[ind]
name = name.lstrip(" ")
if name == "power low":
if compute_state['fix_enable_low']:
name += ' (Fixed)'
else:
name += ' (Fitted)'
if name == "power high":
if compute_state['fix_enable_high']:
name += ' (Fixed)'
else:
name += ' (Fitted)'
state += "%s: %s\n" % (name, value)
# Outputs
state += "\n=== Outputs ==="
for item in output_list:
item_split = item[0].split('_')
# Exclude the extrapolation that turned off
if len(item_split) > 1:
if low_off and item_split[1] == 'low':
continue
if high_off and item_split[1] == 'high':
continue
max_ind = len(item_split) - 1
value = None
if hasattr(self.container, item[0]):
# Q* outputs
value = getattr(self.container, item[0])
else:
# other outputs than Q*
name = item[0] + "_tcl"
if name in self.saved_state.keys():
value = self.saved_state[name]
# Exclude the outputs w/''
if value == '':
continue
# Error outputs
if item_split[max_ind] == 'err':
state += "+- %s " % format_number(value)
# Percentage outputs
elif item_split[max_ind] == 'percent':
value = float(value) * 100
state += "(%s %s)" % (format_number(value), '%')
# Outputs
else:
state += "\n%s: %s " % (item[1],
format_number(value, high=True))
# Include warning msg
if self.container is not None:
state += "\n\nNote:\n" + self.container.warning_msg
return state