Python linkage Examples

Example #1

File: test_hierarchy.py Project: quintusdias/scipy

    def test_compare_with_trivial(self):
        rng = np.random.RandomState(0)
        n = 20
        X = rng.rand(n, 2)
        d = pdist(X)

        for method, code in _LINKAGE_METHODS.items():
            Z_trivial = _hierarchy.linkage(d, n, code)
            Z = linkage(d, method)
            assert_allclose(Z_trivial, Z, rtol=1e-14, atol=1e-15)

Example #2

File: test_hierarchy.py Project: ElDeveloper/scipy

    def test_compare_with_trivial(self):
        rng = np.random.RandomState(0)
        n = 20
        X = rng.rand(n, 2)
        d = pdist(X)

        for method, code in _LINKAGE_METHODS.items():
            Z_trivial = _hierarchy.linkage(d, n, code)
            Z = linkage(d, method)
            assert_allclose(Z_trivial, Z, rtol=1e-14, atol=1e-15)