def __init__(self, rxnBlock, dimerGenBlock, omniGenBlock, uniGenBlock):
        MoleculizerSection.__init__(self, "ReactionRulesSection", rxnBlock)

        self.the_dimer_section = DimerGenSection( dimerGenBlock )
        self.the_omni_gen_section = OmniGenSection( omniGenBlock )
        self.the_uni_gen_section = UniGenSection( uniGenBlock )

        return
Example #2
0
    def __init__(self, rxnBlock, dimerGenBlock, omniGenBlock, uniGenBlock):
        MoleculizerSection.__init__(self, "ReactionRulesSection", rxnBlock)

        self.the_dimer_section = DimerGenSection(dimerGenBlock)
        self.the_omni_gen_section = OmniGenSection(omniGenBlock)
        self.the_uni_gen_section = UniGenSection(uniGenBlock)

        return
Example #3
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 def __init__(self, uniGenBlock):
     MoleculizerSection.__init__(self, "unigensection", uniGenBlock)
     return
Example #4
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 def __init__(self, dimerBlock):
     MoleculizerSection.__init__(self, "DimerGenSection", dimerBlock)
     return
Example #5
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 def __init__(self, omniBlock):
     MoleculizerSection.__init__(self, "OmniGenSection", omniBlock)
     return
Example #6
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 def __init__(self, molsBlockToInterpret):
     MoleculizerSection.__init__(self, "mols", molsBlockToInterpret)
     return
 def __init__(self, dimerBlock):
     MoleculizerSection.__init__(self, "DimerGenSection", dimerBlock)
     return 
Example #8
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 def __init__(self, modificationsBlock):
     MoleculizerSection.__init__(self, "modifications", modificationsBlock)
     return
 def __init__(self, explicitSpeciesBlock):
     MoleculizerSection.__init__(self, "ExplicitSpeciesSection",
                                 explicitSpeciesBlock)
     return
 def __init__(self, omniBlock):
     MoleculizerSection.__init__(self, "OmniGenSection", omniBlock)
     return
 def __init__(self, speciesStreamBlock):
     MoleculizerSection.__init__(self, "SpeciesStreamsSection", speciesStreamBlock)
     return
 def __init__(self, explicitSpeciesBlock ):
     MoleculizerSection.__init__(self, "ExplicitSpeciesSection", explicitSpeciesBlock)
     return
Example #13
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 def __init__(self, molsBlockToInterpret):
     MoleculizerSection.__init__(self, "mols", molsBlockToInterpret)
     return
Example #14
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 def __init__(self, speciesStreamBlock):
     MoleculizerSection.__init__(self, "SpeciesStreamsSection",
                                 speciesStreamBlock)
     return
 def __init__(self, uniGenBlock):
     MoleculizerSection.__init__(self, "unigensection", uniGenBlock)
     return 
Example #16
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 def __init__(self, name, allosterySection):
     MoleculizerSection.__init__(self, name, allosterySection)
     return
Example #17
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 def __init__(self, name, allosterySection):
     MoleculizerSection.__init__(self, name, allosterySection)
     return