Example #1
0
    def Import(self, context, request):
        """ Import Form
        """
        infile = request.form['instrument_results_file']
        fileformat = request.form.get(
            'instrument_results_file_format', 'xls')
        artoapply = request.form['artoapply']
        override = request.form['results_override']
        instrument = request.form.get('instrument', None)
        errors = []
        logs = []
        warns = []

        # Load the most suitable parser according to file extension/options/etc...
        parser = None
        if not hasattr(infile, 'filename'):
            errors.append(_("No file selected"))
        if fileformat in ('xls', 'xlsx'):
            parser = ChemStationParser(infile, encoding=fileformat)
        else:
            errors.append(t(_("Unrecognized file format ${fileformat}",
                              mapping={"fileformat": fileformat})))

        if parser:
            # Load the importer
            status = ['sample_received', 'attachment_due', 'to_be_verified']
            if artoapply == 'received':
                status = ['sample_received']
            elif artoapply == 'received_tobeverified':
                status = ['sample_received', 'attachment_due', 'to_be_verified']

            over = [False, False]
            if override == 'nooverride':
                over = [False, False]
            elif override == 'override':
                over = [True, False]
            elif override == 'overrideempty':
                over = [True, True]

            importer = AnalysisResultsImporter(
                parser=parser,
                context=context,
                allowed_ar_states=status,
                allowed_analysis_states=None,
                override=over,
                instrument_uid=instrument)
            tbex = ''
            try:
                importer.process()
                errors = importer.errors
                logs = importer.logs
                warns = importer.warns
            except Exception as e:
                tbex = traceback.format_exc()
                errors.append(tbex)

        results = {'errors': errors, 'log': logs, 'warns': warns}

        return json.dumps(results)
Example #2
0
    def Import(context, request):
        errors = []
        logs = []
        warns = []

        infile = request.form['instrument_results_file']
        if not hasattr(infile, 'filename'):
            errors.append(_("No file selected"))

        artoapply = request.form['artoapply']
        override = request.form['results_override']
        instrument = request.form.get('instrument', None)
        default_unit = request.form['default_unit']
        worksheet = request.form.get('worksheet', 0)
        parser = S8TigerParser(infile,
                               worksheet=worksheet,
                               default_unit=default_unit)
        if parser:

            status = ['sample_received', 'attachment_due', 'to_be_verified']
            if artoapply == 'received':
                status = ['sample_received']
            elif artoapply == 'received_tobeverified':
                status = [
                    'sample_received', 'attachment_due', 'to_be_verified'
                ]

            over = [False, False]
            if override == 'nooverride':
                over = [False, False]
            elif override == 'override':
                over = [True, False]
            elif override == 'overrideempty':
                over = [True, True]

            importer = AnalysisResultsImporter(parser=parser,
                                               context=context,
                                               allowed_ar_states=status,
                                               allowed_analysis_states=None,
                                               override=over,
                                               instrument_uid=instrument)

            try:
                importer.process()
                errors = importer.errors
                logs = importer.logs
                warns = importer.warns
            except Exception as e:
                errors.extend([repr(e), traceback.format_exc()])

        results = {'errors': errors, 'log': logs, 'warns': warns}

        return json.dumps(results)
Example #3
0
 def __init__(self,
              parser,
              context,
              override,
              allowed_ar_states=None,
              allowed_analysis_states=None,
              instrument_uid='',
              form=None):
     AnalysisResultsImporter.__init__(self, parser, context, override,
                                      allowed_ar_states,
                                      allowed_analysis_states,
                                      instrument_uid)