Python get_es_variant_gene_counts Examples

Example #1

File: variant_search_api.py Project: rsolano1-uw/seqr

def get_variant_gene_breakdown(request, search_hash):
    results_model = VariantSearchResults.objects.get(search_hash=search_hash)
    _check_results_permission(results_model, request.user)

    gene_counts = get_es_variant_gene_counts(results_model)
    return create_json_response({
        'searchGeneBreakdown': {search_hash: gene_counts},
        'genesById': get_genes(gene_counts.keys(), add_omim=True, add_constraints=True),
    })

Example #2

def get_variant_gene_breakdown(request, search_hash):
    results_model = VariantSearchResults.objects.get(search_hash=search_hash)
    _check_results_permission(results_model, request.user)

    gene_counts = get_es_variant_gene_counts(results_model)
    return create_json_response({
        'searchGeneBreakdown': {search_hash: gene_counts},
        'genesById': get_genes_for_variant_display(list(gene_counts.keys())),
    })