def test_parse_input_correct(self):
correct_seq = 'cttggaacttctggtacat gtaccagaagttccaagccgt'
result = validators.parse_input(correct_seq)
self.assertEqual(
result,
('CTTGGAACTTCTGGTACAT', 'GTACCAGAAGTTCCAAGCCGT', -4, 2)
)
def sirna_task_creator(data):
"""Handler to initialize task which creates sh-miR(s) from siRNA
Args:
data: one siRNA strand (active) or two siRNA strands separated by space.
First strand is active, both are in 5-3 orientation.
Returns:
Task id
"""
parsed = parse_input(data)
# if error
if isinstance(parsed, dict):
return jsonify(parsed), 400
resource = shmir_from_sirna_score.apply_async(
args=parsed, kwargs=request.args.to_dict(), queue='score')
return jsonify({'task_id': resource.task_id})
def test_parse_input_invalid_response(self):
incorrect_seq = 'ptaki lataja kluczem'
result = validators.parse_input(incorrect_seq)
self.assertEqual(result['status'], 'error')
self.assertEqual(result['code'], 400)
