Example #1
0
def test_img_to_relative_xyi(random_seed=None):
    from skbeam.core.utils import img_to_relative_xyi
    # make the RNG deterministic
    if random_seed is not None:
        np.random.seed(42)
    # set the maximum image dims
    maxx = 2000
    maxy = 2000
    # create a randomly sized image
    nx = int(np.random.rand() * maxx)
    ny = int(np.random.rand() * maxy)
    # create a randomly located center
    cx = np.random.rand() * nx
    cy = np.random.rand() * ny
    # generate the image
    img = np.ones((nx, ny))
    # generate options for the x center to test edge conditions
    cx_lst = [0, cx, nx]
    # generate options for the y center to test edge conditions
    cy_lst = [0, cy, ny]
    for cx, cy in zip(cx_lst, cy_lst):
        # call the function
        x, y, i = img_to_relative_xyi(img=img, cx=cx, cy=cy)
        logger.debug('y {0}'.format(y))
        logger.debug('sum(y) {0}'.format(sum(y)))
        expected_total_y = sum(np.arange(ny, dtype=np.int64) - cy) * nx
        logger.debug('expected_total_y {0}'.format(expected_total_y))
        logger.debug('x {0}'.format(x))
        logger.debug('sum(x) {0}'.format(sum(x)))
        expected_total_x = sum(np.arange(nx, dtype=np.int64) - cx) * ny
        logger.debug('expected_total_x {0}'.format(expected_total_x))
        expected_total_intensity = nx * ny
        try:
            assert_almost_equal(sum(x), expected_total_x, decimal=0)
            assert_almost_equal(sum(y), expected_total_y, decimal=0)
            assert_equal(sum(i), expected_total_intensity)
        except AssertionError as ae:
            logger.error('img dims: ({0}, {1})'.format(nx, ny))
            logger.error('img center: ({0}, {1})'.format(cx, cy))
            logger.error('sum(returned_x): {0}'.format(sum(x)))
            logger.error('expected_x: {0}'.format(expected_total_x))
            logger.error('sum(returned_y): {0}'.format(sum(y)))
            logger.error('expected_y: {0}'.format(expected_total_y))
            logger.error('sum(returned_i): {0}'.format(sum(i)))
            logger.error('expected_x: {0}'.format(expected_total_intensity))
            six.reraise(AssertionError, ae, sys.exc_info()[2])
Example #2
0
def test_img_to_relative_xyi(random_seed=None):
    from skbeam.core.utils import img_to_relative_xyi
    # make the RNG deterministic
    if random_seed is not None:
        np.random.seed(42)
    # set the maximum image dims
    maxx = 2000
    maxy = 2000
    # create a randomly sized image
    nx = int(np.random.rand() * maxx)
    ny = int(np.random.rand() * maxy)
    # create a randomly located center
    cx = np.random.rand() * nx
    cy = np.random.rand() * ny
    # generate the image
    img = np.ones((nx, ny))
    # generate options for the x center to test edge conditions
    cx_lst = [0, cx, nx]
    # generate options for the y center to test edge conditions
    cy_lst = [0, cy, ny]
    for cx, cy in zip(cx_lst, cy_lst):
        # call the function
        x, y, i = img_to_relative_xyi(img=img, cx=cx, cy=cy)
        logger.debug('y {0}'.format(y))
        logger.debug('sum(y) {0}'.format(sum(y)))
        expected_total_y = sum(np.arange(ny, dtype=np.int64) - cy) * nx
        logger.debug('expected_total_y {0}'.format(expected_total_y))
        logger.debug('x {0}'.format(x))
        logger.debug('sum(x) {0}'.format(sum(x)))
        expected_total_x = sum(np.arange(nx, dtype=np.int64) - cx) * ny
        logger.debug('expected_total_x {0}'.format(expected_total_x))
        expected_total_intensity = nx * ny
        try:
            assert_almost_equal(sum(x), expected_total_x, decimal=0)
            assert_almost_equal(sum(y), expected_total_y, decimal=0)
            assert_equal(sum(i), expected_total_intensity)
        except AssertionError as ae:
            logger.error('img dims: ({0}, {1})'.format(nx, ny))
            logger.error('img center: ({0}, {1})'.format(cx, cy))
            logger.error('sum(returned_x): {0}'.format(sum(x)))
            logger.error('expected_x: {0}'.format(expected_total_x))
            logger.error('sum(returned_y): {0}'.format(sum(y)))
            logger.error('expected_y: {0}'.format(expected_total_y))
            logger.error('sum(returned_i): {0}'.format(sum(i)))
            logger.error('expected_x: {0}'.format(expected_total_intensity))
            six.reraise(AssertionError, ae, sys.exc_info()[2])
Example #3
0
def _fail_img_to_relative_xyi_helper(input_dict):
    core.img_to_relative_xyi(**input_dict)
Example #4
0
def _fail_img_to_relative_xyi_helper(input_dict):
    with pytest.raises(ValueError):
        core.img_to_relative_xyi(**input_dict)
Example #5
0
def _fail_img_to_relative_xyi_helper(input_dict):
    core.img_to_relative_xyi(**input_dict)