def readConfig(self, filename):
Skeletor.readConfig(self, self.configPath)
self.traces_after_pp_path = self.config.get('Postprocessing', 'traces_after_pp_path')
if self.base_path in self.simPath:
quit("I can't not run with this population folder. Please first copy the individuals to simulate into a new directory.")
self.pool_path = self.simPath + self.pool_path
self.pool_file_path = self.pool_path + self.pool_filename
self.pop_path = self.simPath + self.pop_path
self.logs_path = self.simPath + self.logs_path
self.traces_after_vox_path = self.simPath + self.traces_after_vox_path
def __init__(self):
Skeletor.__init__(self, False)
self.individual = "0"
self.simPath = ""
self.traces_after_vox_path = "traces_afterVox/"
self.traces_after_pp_path = "traces_afterPP/"
self.pop_path = "population/"
self.pool_path = "pool/"
self.pool_filename = 'vox.{0}.pool'
self.logs_path = "logs/"
self.lastPoolFile = 0
self.voxelyze_path = "~/EC14-voxelyze/voxelyzeMain"
self.voxelyze_stepping = 100
self.voxelyze_cmd = "{id}"
self.voxelyze_walltime = 1000
self.submit_script = "scripts/submit.sh"