class Ui_ModelFinder(object):
def setupUi(self, ModelFinder):
ModelFinder.setObjectName("ModelFinder")
ModelFinder.resize(835, 522)
self.verticalLayout = QtWidgets.QVBoxLayout(ModelFinder)
self.verticalLayout.setObjectName("verticalLayout")
self.gridLayout_4 = QtWidgets.QGridLayout()
self.gridLayout_4.setObjectName("gridLayout_4")
self.groupBox_4 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout.setObjectName("gridLayout")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout.addWidget(self.label_5, 0, 0, 1, 1)
self.lineEdit = InputQLineEdit(self.groupBox_4)
self.lineEdit.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit.setText("")
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout.addWidget(self.lineEdit, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.gridLayout.addWidget(self.label_8, 1, 0, 1, 1)
self.lineEdit_2 = InputQLineEdit(self.groupBox_4)
self.lineEdit_2.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_2.setReadOnly(True)
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout.addWidget(self.lineEdit_2, 1, 1, 1, 1)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout.addWidget(self.pushButton_4, 1, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.groupBox_4)
self.label_3.setObjectName("label_3")
self.horizontalLayout.addWidget(self.label_3)
self.label_2 = ClickedLableGif(self.groupBox_4)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.gridLayout.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.gridLayout_4.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_2.setCheckable(True)
self.groupBox_2.setChecked(False)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_5.setContentsMargins(3, 6, 3, 3)
self.gridLayout_5.setHorizontalSpacing(3)
self.gridLayout_5.setVerticalSpacing(2)
self.gridLayout_5.setObjectName("gridLayout_5")
self.radioButton = QtWidgets.QRadioButton(self.groupBox_2)
self.radioButton.setChecked(True)
self.radioButton.setObjectName("radioButton")
self.gridLayout_5.addWidget(self.radioButton, 0, 0, 1, 1)
self.radioButton_2 = QtWidgets.QRadioButton(self.groupBox_2)
self.radioButton_2.setObjectName("radioButton_2")
self.gridLayout_5.addWidget(self.radioButton_2, 0, 1, 1, 1)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout_5.addWidget(self.checkBox_3, 0, 2, 1, 1)
self.textEdit = DblClickTexedit(self.groupBox_2)
self.textEdit.setLineWrapMode(QtWidgets.QTextEdit.NoWrap)
self.textEdit.setReadOnly(True)
self.textEdit.setObjectName("textEdit")
self.gridLayout_5.addWidget(self.textEdit, 1, 0, 1, 3)
self.gridLayout_4.addWidget(self.groupBox_2, 0, 1, 2, 1)
self.groupBox = QtWidgets.QGroupBox(ModelFinder)
self.groupBox.setObjectName("groupBox")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_24 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_2.addWidget(self.label_24, 0, 0, 1, 1)
self.label_22 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.gridLayout_2.addWidget(self.label_22, 1, 0, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_2.addWidget(self.comboBox_9, 1, 1, 1, 2)
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout_2.addWidget(self.label_25, 2, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout_2.addWidget(self.comboBox_4, 2, 1, 1, 2)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout_2.addWidget(self.label_26, 3, 0, 1, 1)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setObjectName("label_27")
self.gridLayout_2.addWidget(self.label_27, 4, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.gridLayout_2.addWidget(self.comboBox_6, 4, 1, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setAutoRepeat(False)
self.checkBox_2.setAutoExclusive(False)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout_2.addWidget(self.checkBox_2, 4, 2, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(153, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_2.addWidget(self.comboBox_3, 0, 1, 1, 2)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout_2.addWidget(self.comboBox_5, 3, 1, 1, 2)
self.gridLayout_4.addWidget(self.groupBox, 1, 0, 1, 1)
self.gridLayout_4.setColumnStretch(0, 9)
self.gridLayout_4.setColumnStretch(1, 7)
self.verticalLayout.addLayout(self.gridLayout_4)
self.groupBox_3 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_2.addWidget(self.pushButton)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(
":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"
), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon1)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.horizontalLayout_2.addWidget(self.pushButton_continue)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_2.addWidget(self.pushButton_2)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon3 = QtGui.QIcon()
icon3.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_6)
self.label_24.setBuddy(self.comboBox_3)
self.label_25.setBuddy(self.comboBox_3)
self.label_26.setBuddy(self.comboBox_3)
self.label_27.setBuddy(self.comboBox_3)
self.retranslateUi(ModelFinder)
QtCore.QMetaObject.connectSlotsByName(ModelFinder)
ModelFinder.setTabOrder(self.pushButton_3, self.pushButton_4)
ModelFinder.setTabOrder(self.pushButton_4, self.pushButton_9)
ModelFinder.setTabOrder(self.pushButton_9, self.lineEdit_2)
ModelFinder.setTabOrder(self.lineEdit_2, self.comboBox_3)
ModelFinder.setTabOrder(self.comboBox_3, self.lineEdit)
ModelFinder.setTabOrder(self.lineEdit, self.comboBox_4)
ModelFinder.setTabOrder(self.comboBox_4, self.comboBox_5)
ModelFinder.setTabOrder(self.comboBox_5, self.comboBox_6)
ModelFinder.setTabOrder(self.comboBox_6, self.pushButton_2)
ModelFinder.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, ModelFinder):
_translate = QtCore.QCoreApplication.translate
ModelFinder.setWindowTitle(_translate("ModelFinder", "ModelFinder"))
self.groupBox_4.setTitle(_translate("ModelFinder", "Input"))
self.label_5.setText(_translate("ModelFinder", "Alignment File:"))
self.lineEdit.setPlaceholderText(
_translate("ModelFinder",
"PHYLIP, FASTA, NEXUS, CLUSTAL format is ok"))
self.label_8.setText(_translate("ModelFinder", "Tree File:"))
self.lineEdit_2.setPlaceholderText(
_translate("ModelFinder", "Optional! (in newick format)"))
self.label_14.setText(
_translate(
"ModelFinder",
"<html><head/><body><p>Click <a href=\"http://www.iqtree.org/doc/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">IQ-TREE</span></p></body></html>"
))
self.label_3.setText(_translate("ModelFinder", "Demo:"))
self.label_2.setToolTip(_translate("ModelFinder", "Brief example"))
self.groupBox_2.setTitle(_translate("ModelFinder", "Partition Mode"))
self.radioButton.setText(_translate("ModelFinder", "Edge-linked"))
self.radioButton_2.setText(_translate("ModelFinder", "Edge-unlinked"))
self.checkBox_3.setText(_translate("ModelFinder", "Merge"))
self.textEdit.setToolTip(
_translate("ModelFinder", "Double-click to edit partition"))
self.groupBox.setTitle(_translate("ModelFinder", "Parameters"))
self.label_24.setText(_translate("ModelFinder", "Sequence Type:"))
self.label_22.setText(_translate("ModelFinder", "Code Table:"))
self.comboBox_9.setItemText(
0, _translate("ModelFinder", "1 The standard code"))
self.comboBox_9.setItemText(
1, _translate("ModelFinder", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(
2, _translate("ModelFinder", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(
3,
_translate(
"ModelFinder",
"4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"
))
self.comboBox_9.setItemText(
4, _translate("ModelFinder", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(
5,
_translate(
"ModelFinder",
"6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(
6,
_translate("ModelFinder",
"9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(
7, _translate("ModelFinder", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(
8,
_translate("ModelFinder",
"11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(
9,
_translate("ModelFinder", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(
10, _translate("ModelFinder", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(
11,
_translate("ModelFinder",
"14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(
12, _translate("ModelFinder",
"16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(
13, _translate("ModelFinder", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(
14,
_translate("ModelFinder",
"22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(
15,
_translate("ModelFinder",
"23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(
16, _translate("ModelFinder",
"24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(
17,
_translate("ModelFinder",
"25 Candidate Division SR1 and Gracilibacteria Code"))
self.label_25.setText(_translate("ModelFinder", "Criterion:"))
self.comboBox_4.setItemText(
0, _translate("ModelFinder",
"Bayesian information criterion (BIC)"))
self.comboBox_4.setItemText(
1, _translate("ModelFinder", "Corrected AIC (AICc)"))
self.comboBox_4.setItemText(
2, _translate("ModelFinder", "Akaike information criterion (AIC)"))
self.label_26.setText(_translate("ModelFinder", "Model for:"))
self.label_27.setText(_translate("ModelFinder", "Threads:"))
self.checkBox_2.setText(
_translate("ModelFinder", "FreeRate heterogeneity [+R]"))
self.comboBox_3.setItemText(0, _translate("ModelFinder",
"Auto detect"))
self.comboBox_3.setItemText(1, _translate("ModelFinder", "DNA"))
self.comboBox_3.setItemText(2, _translate("ModelFinder", "Protein"))
self.comboBox_3.setItemText(3, _translate("ModelFinder", "Codon"))
self.comboBox_3.setItemText(4, _translate("ModelFinder", "Binary"))
self.comboBox_3.setItemText(5, _translate("ModelFinder", "Morphology"))
self.comboBox_3.setItemText(6, _translate("ModelFinder", "DNA-->AA"))
self.comboBox_5.setItemText(0, _translate("ModelFinder", "IQ-TREE"))
self.comboBox_5.setItemText(1, _translate("ModelFinder", "Mrbayes"))
self.comboBox_5.setItemText(2, _translate("ModelFinder", "RAxML"))
self.comboBox_5.setItemText(3, _translate("ModelFinder", "PhyML"))
self.comboBox_5.setItemText(4, _translate("ModelFinder",
"BEAST1 (NUC)"))
self.comboBox_5.setItemText(5, _translate("ModelFinder",
"BEAST2 (NUC)"))
self.comboBox_5.setItemText(6, _translate("ModelFinder", "BEAST (AA)"))
self.groupBox_3.setTitle(_translate("ModelFinder", "Run"))
self.pushButton.setText(_translate("ModelFinder", "Start"))
self.pushButton_continue.setText(
_translate("ModelFinder", "Continue Previous Analysis"))
self.pushButton_2.setText(_translate("ModelFinder", "Stop"))
self.groupBox_6.setTitle(_translate("ModelFinder", "Progress"))
self.pushButton_9.setText(_translate("ModelFinder", "Show log"))
class Ui_HmmCleaner(object):
def setupUi(self, HmmCleaner):
HmmCleaner.setObjectName("HmmCleaner")
HmmCleaner.resize(501, 388)
HmmCleaner.setStyleSheet("")
HmmCleaner.setSizeGripEnabled(True)
self.verticalLayout = QtWidgets.QVBoxLayout(HmmCleaner)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox_4 = QtWidgets.QGroupBox(HmmCleaner)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.horizontalLayout_5.addWidget(self.label_4)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.horizontalLayout_5.addWidget(self.comboBox_4)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.horizontalLayout_5.addWidget(self.pushButton_3)
self.gridLayout_2.addLayout(self.horizontalLayout_5, 0, 0, 1, 1)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setOpenExternalLinks(True)
self.label_5.setObjectName("label_5")
self.horizontalLayout_3.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(58, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_3.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.groupBox_4)
self.label_3.setObjectName("label_3")
self.horizontalLayout_3.addWidget(self.label_3)
self.label_7 = ClickedLableGif(self.groupBox_4)
self.label_7.setText("")
self.label_7.setObjectName("label_7")
self.horizontalLayout_3.addWidget(self.label_7)
self.gridLayout_2.addLayout(self.horizontalLayout_3, 1, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_4)
self.groupBox_2 = QtWidgets.QGroupBox(HmmCleaner)
self.groupBox_2.setObjectName("groupBox_2")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.groupBox_2)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label = QtWidgets.QLabel(self.groupBox_2)
self.label.setObjectName("label")
self.horizontalLayout.addWidget(self.label)
self.doubleSpinBox = QtWidgets.QDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox.setMinimum(-9999.0)
self.doubleSpinBox.setMaximum(0.0)
self.doubleSpinBox.setSingleStep(0.01)
self.doubleSpinBox.setProperty("value", -0.15)
self.doubleSpinBox.setObjectName("doubleSpinBox")
self.horizontalLayout.addWidget(self.doubleSpinBox)
self.doubleSpinBox_2 = QtWidgets.QDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_2.setMinimum(-9999.0)
self.doubleSpinBox_2.setMaximum(0.0)
self.doubleSpinBox_2.setSingleStep(0.01)
self.doubleSpinBox_2.setProperty("value", -0.08)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.horizontalLayout.addWidget(self.doubleSpinBox_2)
self.doubleSpinBox_3 = QtWidgets.QDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_3.setMaximum(9999.0)
self.doubleSpinBox_3.setSingleStep(0.01)
self.doubleSpinBox_3.setProperty("value", 0.15)
self.doubleSpinBox_3.setObjectName("doubleSpinBox_3")
self.horizontalLayout.addWidget(self.doubleSpinBox_3)
self.doubleSpinBox_4 = QtWidgets.QDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_4.setSingleStep(0.01)
self.doubleSpinBox_4.setProperty("value", 0.45)
self.doubleSpinBox_4.setObjectName("doubleSpinBox_4")
self.horizontalLayout.addWidget(self.doubleSpinBox_4)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_5.setLayoutDirection(QtCore.Qt.LeftToRight)
self.checkBox_5.setObjectName("checkBox_5")
self.horizontalLayout.addWidget(self.checkBox_5)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_4.setObjectName("checkBox_4")
self.horizontalLayout.addWidget(self.checkBox_4)
self.verticalLayout_3.addLayout(self.horizontalLayout)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label_25 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.horizontalLayout_4.addWidget(self.label_25)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.horizontalLayout_4.addWidget(self.comboBox_5)
self.checkBox = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox.setObjectName("checkBox")
self.horizontalLayout_4.addWidget(self.checkBox)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_2.setObjectName("checkBox_2")
self.horizontalLayout_4.addWidget(self.checkBox_2)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout_4.addWidget(self.checkBox_3)
self.checkBox_6 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_6.setObjectName("checkBox_6")
self.horizontalLayout_4.addWidget(self.checkBox_6)
self.verticalLayout_3.addLayout(self.horizontalLayout_4)
self.horizontalLayout_6 = QtWidgets.QHBoxLayout()
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.label_24 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.horizontalLayout_6.addWidget(self.label_24)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.horizontalLayout_6.addWidget(self.comboBox_3)
self.label_40 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_40.setFont(font)
self.label_40.setObjectName("label_40")
self.horizontalLayout_6.addWidget(self.label_40)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setObjectName("comboBox_6")
self.horizontalLayout_6.addWidget(self.comboBox_6)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_9 = QtWidgets.QLabel(self.groupBox_2)
self.label_9.setObjectName("label_9")
self.horizontalLayout_2.addWidget(self.label_9)
self.doubleSpinBox_6 = QtWidgets.QDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_6.setMaximum(1.0)
self.doubleSpinBox_6.setSingleStep(0.01)
self.doubleSpinBox_6.setProperty("value", 0.5)
self.doubleSpinBox_6.setObjectName("doubleSpinBox_6")
self.horizontalLayout_2.addWidget(self.doubleSpinBox_6)
self.horizontalLayout_6.addLayout(self.horizontalLayout_2)
self.verticalLayout_3.addLayout(self.horizontalLayout_6)
self.verticalLayout.addWidget(self.groupBox_2)
self.groupBox_3 = QtWidgets.QGroupBox(HmmCleaner)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox = QtWidgets.QGroupBox(HmmCleaner)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.progressBar = QtWidgets.QProgressBar(self.groupBox)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout.addWidget(self.progressBar, 0, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_9.sizePolicy().hasHeightForWidth())
self.pushButton_9.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon2)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox)
self.label_25.setBuddy(self.comboBox_3)
self.label_24.setBuddy(self.comboBox_3)
self.retranslateUi(HmmCleaner)
self.comboBox_6.setCurrentIndex(-1)
QtCore.QMetaObject.connectSlotsByName(HmmCleaner)
HmmCleaner.setTabOrder(self.pushButton_3, self.comboBox_3)
HmmCleaner.setTabOrder(self.comboBox_3, self.comboBox_4)
HmmCleaner.setTabOrder(self.comboBox_4, self.pushButton)
HmmCleaner.setTabOrder(self.pushButton, self.pushButton_2)
HmmCleaner.setTabOrder(self.pushButton_2, self.pushButton_9)
def retranslateUi(self, HmmCleaner):
_translate = QtCore.QCoreApplication.translate
HmmCleaner.setWindowTitle(_translate("HmmCleaner", "HmmCleaner"))
self.groupBox_4.setTitle(_translate("HmmCleaner", "Input"))
self.label_4.setText(_translate("HmmCleaner", "Input:"))
self.label_5.setText(
_translate(
"HmmCleaner",
"<html><head/><body><p>Click <a href=\"https://metacpan.org/pod/release/ARNODF/Bio-MUST-Apps-HmmCleaner-0.180750/bin/HmmCleaner.pl\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about HmmCleaner.</p></body></html>"
))
self.label_3.setText(_translate("HmmCleaner", "Demo:"))
self.label_7.setToolTip(_translate("HmmCleaner", "Brief example"))
self.groupBox_2.setTitle(_translate("HmmCleaner", "Parameter"))
self.label.setToolTip(
_translate(
"HmmCleaner",
"Cost parameters that defines the low similarity segments detected by HmmCleaner"
))
self.label.setText(_translate("HmmCleaner", "costs:"))
self.checkBox_5.setToolTip(
_translate(
"HmmCleaner",
"Convert X characters to gaps that will not be taken into account by HmmCleaner."
))
self.checkBox_5.setText(_translate("HmmCleaner", "noX"))
self.checkBox_4.setToolTip(
_translate("HmmCleaner",
"Outputs result file(s) in ali MUST format."))
self.checkBox_4.setText(_translate("HmmCleaner", "ali"))
self.label_25.setToolTip(
_translate("HmmCleaner", "Verbosity level for logging to STDERR "))
self.label_25.setText(_translate("HmmCleaner", "verbosity"))
self.comboBox_5.setToolTip(
_translate("HmmCleaner", "Verbosity level for logging to STDERR "))
self.comboBox_5.setItemText(0, _translate("HmmCleaner", "0"))
self.comboBox_5.setItemText(1, _translate("HmmCleaner", "1"))
self.comboBox_5.setItemText(2, _translate("HmmCleaner", "2"))
self.comboBox_5.setItemText(3, _translate("HmmCleaner", "3"))
self.comboBox_5.setItemText(4, _translate("HmmCleaner", "4"))
self.comboBox_5.setItemText(5, _translate("HmmCleaner", "5"))
self.checkBox.setToolTip(
_translate(
"HmmCleaner",
"Load predifined cost parameters optimized to give more weigth on specificity. Can be use with --large option. User defined costs will be prioritary if present."
))
self.checkBox.setText(_translate("HmmCleaner", "specificity"))
self.checkBox_2.setToolTip(
_translate(
"HmmCleaner",
"Load predifined cost parameters optimized for MSA with at least 50 sequences. Can be use with --specificity option. User defined costs will be prioritary if present."
))
self.checkBox_2.setText(_translate("HmmCleaner", "large"))
self.checkBox_3.setToolTip(
_translate("HmmCleaner", "Only outputs list of segments removed."))
self.checkBox_3.setText(_translate("HmmCleaner", "log_only"))
self.checkBox_6.setToolTip(
_translate(
"HmmCleaner",
"Determine if output will have defline with generic suffix (_hmmcleaned)"
))
self.checkBox_6.setText(_translate("HmmCleaner", "changeID"))
self.label_24.setToolTip(
_translate(
"HmmCleaner",
"Determine how the profile will be create complete or leave-one-out (default: complete) leave-one-out = without the analyzed sequence (new profile each time) complete = all sequences (same profile for each sequence) First case is more sensitive but need more ressources (hence more time)"
))
self.label_24.setText(_translate("HmmCleaner", "profile:"))
self.comboBox_3.setToolTip(
_translate(
"HmmCleaner",
"Determine how the profile will be create complete or leave-one-out (default: complete) leave-one-out = without the analyzed sequence (new profile each time) complete = all sequences (same profile for each sequence) First case is more sensitive but need more ressources (hence more time)"
))
self.comboBox_3.setItemText(0, _translate("HmmCleaner", "complete"))
self.comboBox_3.setItemText(1, _translate("HmmCleaner",
"leave-one-out"))
self.label_40.setToolTip(
_translate("HmmCleaner", "Amino acid score matrix to use"))
self.label_40.setText(_translate("HmmCleaner", "thread:"))
self.comboBox_6.setToolTip(
_translate("HmmCleaner", "Amino acid score matrix to use"))
self.label_9.setToolTip(
_translate(
"HmmCleaner",
"Handle the symfrac option of hmmbuild modifying the required fraction of sequences to consider a position as a consensus column"
))
self.label_9.setText(_translate("HmmCleaner", "symfrac:"))
self.doubleSpinBox_6.setToolTip(
_translate(
"HmmCleaner",
"Handle the symfrac option of hmmbuild modifying the required fraction of sequences to consider a position as a consensus column"
))
self.groupBox_3.setTitle(_translate("HmmCleaner", "Run"))
self.pushButton.setText(_translate("HmmCleaner", "Start"))
self.pushButton_2.setText(_translate("HmmCleaner", "Stop"))
self.groupBox.setTitle(_translate("HmmCleaner", "Progress"))
self.pushButton_9.setText(_translate("HmmCleaner", "Show log"))
class Ui_trimAl(object):
def setupUi(self, trimAl):
trimAl.setObjectName("trimAl")
trimAl.resize(887, 570)
trimAl.setStyleSheet("")
trimAl.setSizeGripEnabled(True)
self.verticalLayout_4 = QtWidgets.QVBoxLayout(trimAl)
self.verticalLayout_4.setObjectName("verticalLayout_4")
self.groupBox_4 = QtWidgets.QGroupBox(trimAl)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_5.setObjectName("gridLayout_5")
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout_5.addWidget(self.comboBox_4, 0, 1, 1, 2)
self.lineEdit_3 = InputQLineEdit(self.groupBox_4)
self.lineEdit_3.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_3.setReadOnly(True)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_5.addWidget(self.lineEdit_3, 2, 1, 1, 2)
self.radioButton = QtWidgets.QRadioButton(self.groupBox_4)
self.radioButton.setChecked(True)
self.radioButton.setObjectName("radioButton")
self.gridLayout_5.addWidget(self.radioButton, 0, 0, 1, 1)
self.radioButton_2 = QtWidgets.QRadioButton(self.groupBox_4)
self.radioButton_2.setObjectName("radioButton_2")
self.gridLayout_5.addWidget(self.radioButton_2, 1, 0, 1, 1)
self.label_18 = QtWidgets.QLabel(self.groupBox_4)
self.label_18.setObjectName("label_18")
self.gridLayout_5.addWidget(self.label_18, 2, 0, 1, 1)
self.pushButton_22 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_22.sizePolicy().hasHeightForWidth())
self.pushButton_22.setSizePolicy(sizePolicy)
self.pushButton_22.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_22.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_22.setStyleSheet("")
self.pushButton_22.setText("")
self.pushButton_22.setObjectName("pushButton_22")
self.gridLayout_5.addWidget(self.pushButton_22, 2, 3, 1, 1)
self.label_40 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_40.setFont(font)
self.label_40.setObjectName("label_40")
self.gridLayout_5.addWidget(self.label_40, 3, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setObjectName("comboBox_6")
self.gridLayout_5.addWidget(self.comboBox_6, 3, 1, 1, 1)
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setOpenExternalLinks(True)
self.label_5.setObjectName("label_5")
self.gridLayout_5.addWidget(self.label_5, 3, 2, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_5.addWidget(self.pushButton_3, 0, 3, 1, 1)
self.label_7 = ClickedLableGif(self.groupBox_4)
self.label_7.setText("")
self.label_7.setObjectName("label_7")
self.gridLayout_5.addWidget(self.label_7, 3, 3, 1, 1)
self.lineEdit_2 = InputQLineEdit(self.groupBox_4)
self.lineEdit_2.setEnabled(False)
self.lineEdit_2.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_2.setReadOnly(True)
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout_5.addWidget(self.lineEdit_2, 1, 1, 1, 2)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout_5.addWidget(self.pushButton_4, 1, 3, 1, 1)
self.verticalLayout_4.addWidget(self.groupBox_4)
self.groupBox_2 = QtWidgets.QGroupBox(trimAl)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_7.setContentsMargins(3, 6, 3, 3)
self.gridLayout_7.setObjectName("gridLayout_7")
self.tabWidget = QtWidgets.QTabWidget(self.groupBox_2)
self.tabWidget.setObjectName("tabWidget")
self.tab = QtWidgets.QWidget()
self.tab.setObjectName("tab")
self.verticalLayout = QtWidgets.QVBoxLayout(self.tab)
self.verticalLayout.setObjectName("verticalLayout")
self.gridLayout_8 = QtWidgets.QGridLayout()
self.gridLayout_8.setObjectName("gridLayout_8")
self.radioButton_11 = QtWidgets.QRadioButton(self.tab)
self.radioButton_11.setObjectName("radioButton_11")
self.gridLayout_8.addWidget(self.radioButton_11, 0, 1, 1, 1)
self.radioButton_10 = QtWidgets.QRadioButton(self.tab)
self.radioButton_10.setChecked(True)
self.radioButton_10.setObjectName("radioButton_10")
self.gridLayout_8.addWidget(self.radioButton_10, 0, 0, 1, 1)
self.radioButton_12 = QtWidgets.QRadioButton(self.tab)
self.radioButton_12.setObjectName("radioButton_12")
self.gridLayout_8.addWidget(self.radioButton_12, 0, 2, 1, 1)
self.radioButton_14 = QtWidgets.QRadioButton(self.tab)
self.radioButton_14.setObjectName("radioButton_14")
self.gridLayout_8.addWidget(self.radioButton_14, 1, 1, 1, 1)
self.radioButton_13 = QtWidgets.QRadioButton(self.tab)
self.radioButton_13.setObjectName("radioButton_13")
self.gridLayout_8.addWidget(self.radioButton_13, 1, 0, 1, 1)
self.radioButton_15 = QtWidgets.QRadioButton(self.tab)
self.radioButton_15.setObjectName("radioButton_15")
self.gridLayout_8.addWidget(self.radioButton_15, 1, 2, 1, 1)
self.verticalLayout.addLayout(self.gridLayout_8)
self.label_3 = QtWidgets.QLabel(self.tab)
self.label_3.setObjectName("label_3")
self.verticalLayout.addWidget(self.label_3)
self.tabWidget.addTab(self.tab, "")
self.tab_2 = QtWidgets.QWidget()
self.tab_2.setObjectName("tab_2")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.tab_2)
self.verticalLayout_3.setContentsMargins(2, 2, 2, 2)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.scrollArea = QtWidgets.QScrollArea(self.tab_2)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setLineWidth(0)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, -52, 834, 160))
self.scrollAreaWidgetContents.setStyleSheet("QWidget#scrollAreaWidgetContents {border: none; background-color: white}\n"
"")
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.scrollAreaWidgetContents)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.gridLayout_4 = QtWidgets.QGridLayout()
self.gridLayout_4.setObjectName("gridLayout_4")
self.label = QtWidgets.QLabel(self.scrollAreaWidgetContents)
self.label.setObjectName("label")
self.gridLayout_4.addWidget(self.label, 0, 0, 1, 1)
self.doubleSpinBox = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox.sizePolicy().hasHeightForWidth())
self.doubleSpinBox.setSizePolicy(sizePolicy)
self.doubleSpinBox.setDecimals(1)
self.doubleSpinBox.setProperty("value", 10.0)
self.doubleSpinBox.setObjectName("doubleSpinBox")
self.gridLayout_4.addWidget(self.doubleSpinBox, 0, 1, 1, 1)
self.label_8 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
self.label_8.setObjectName("label_8")
self.gridLayout_4.addWidget(self.label_8, 1, 0, 1, 1)
self.doubleSpinBox_2 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_2.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_2.setSizePolicy(sizePolicy)
self.doubleSpinBox_2.setDecimals(1)
self.doubleSpinBox_2.setMaximum(1.0)
self.doubleSpinBox_2.setSingleStep(0.1)
self.doubleSpinBox_2.setProperty("value", 0.9)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.gridLayout_4.addWidget(self.doubleSpinBox_2, 1, 1, 1, 1)
self.label_9 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
self.label_9.setMinimumSize(QtCore.QSize(480, 0))
self.label_9.setObjectName("label_9")
self.gridLayout_4.addWidget(self.label_9, 2, 0, 1, 1)
self.doubleSpinBox_3 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_3.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_3.setSizePolicy(sizePolicy)
self.doubleSpinBox_3.setDecimals(1)
self.doubleSpinBox_3.setMaximum(1.0)
self.doubleSpinBox_3.setSingleStep(0.1)
self.doubleSpinBox_3.setProperty("value", 0.0)
self.doubleSpinBox_3.setObjectName("doubleSpinBox_3")
self.gridLayout_4.addWidget(self.doubleSpinBox_3, 2, 1, 1, 1)
self.checkBox_9 = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
self.checkBox_9.setObjectName("checkBox_9")
self.gridLayout_4.addWidget(self.checkBox_9, 3, 0, 1, 1)
self.doubleSpinBox_4 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_4.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_4.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_4.setSizePolicy(sizePolicy)
self.doubleSpinBox_4.setDecimals(1)
self.doubleSpinBox_4.setMaximum(1.0)
self.doubleSpinBox_4.setSingleStep(0.1)
self.doubleSpinBox_4.setProperty("value", 0.0)
self.doubleSpinBox_4.setObjectName("doubleSpinBox_4")
self.gridLayout_4.addWidget(self.doubleSpinBox_4, 3, 1, 1, 1)
self.verticalLayout_2.addLayout(self.gridLayout_4)
self.gridLayout_6 = QtWidgets.QGridLayout()
self.gridLayout_6.setObjectName("gridLayout_6")
self.checkBox_3 = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.checkBox_3.sizePolicy().hasHeightForWidth())
self.checkBox_3.setSizePolicy(sizePolicy)
self.checkBox_3.setMinimumSize(QtCore.QSize(283, 0))
self.checkBox_3.setChecked(True)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout_6.addWidget(self.checkBox_3, 0, 0, 1, 1)
self.doubleSpinBox_7 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_7.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_7.setSizePolicy(sizePolicy)
self.doubleSpinBox_7.setMaximumSize(QtCore.QSize(55, 16777215))
self.doubleSpinBox_7.setDecimals(1)
self.doubleSpinBox_7.setMaximum(1e+21)
self.doubleSpinBox_7.setSingleStep(0.1)
self.doubleSpinBox_7.setProperty("value", 1.0)
self.doubleSpinBox_7.setObjectName("doubleSpinBox_7")
self.gridLayout_6.addWidget(self.doubleSpinBox_7, 0, 1, 1, 1)
self.checkBox_6 = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.checkBox_6.sizePolicy().hasHeightForWidth())
self.checkBox_6.setSizePolicy(sizePolicy)
self.checkBox_6.setObjectName("checkBox_6")
self.gridLayout_6.addWidget(self.checkBox_6, 0, 2, 1, 1)
self.doubleSpinBox_6 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_6.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_6.setSizePolicy(sizePolicy)
self.doubleSpinBox_6.setMaximumSize(QtCore.QSize(55, 16777215))
self.doubleSpinBox_6.setDecimals(1)
self.doubleSpinBox_6.setMaximum(1e+21)
self.doubleSpinBox_6.setSingleStep(0.1)
self.doubleSpinBox_6.setProperty("value", 1.0)
self.doubleSpinBox_6.setObjectName("doubleSpinBox_6")
self.gridLayout_6.addWidget(self.doubleSpinBox_6, 0, 3, 1, 1)
self.checkBox_7 = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.checkBox_7.sizePolicy().hasHeightForWidth())
self.checkBox_7.setSizePolicy(sizePolicy)
self.checkBox_7.setObjectName("checkBox_7")
self.gridLayout_6.addWidget(self.checkBox_7, 1, 0, 1, 1)
self.doubleSpinBox_5 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_5.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_5.setSizePolicy(sizePolicy)
self.doubleSpinBox_5.setMaximumSize(QtCore.QSize(55, 16777215))
self.doubleSpinBox_5.setDecimals(1)
self.doubleSpinBox_5.setMaximum(1e+21)
self.doubleSpinBox_5.setSingleStep(0.1)
self.doubleSpinBox_5.setProperty("value", 1.0)
self.doubleSpinBox_5.setObjectName("doubleSpinBox_5")
self.gridLayout_6.addWidget(self.doubleSpinBox_5, 1, 1, 1, 1)
self.checkBox_8 = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.checkBox_8.sizePolicy().hasHeightForWidth())
self.checkBox_8.setSizePolicy(sizePolicy)
self.checkBox_8.setMinimumSize(QtCore.QSize(240, 0))
self.checkBox_8.setObjectName("checkBox_8")
self.gridLayout_6.addWidget(self.checkBox_8, 1, 2, 1, 1)
self.doubleSpinBox_8 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox_8.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_8.setSizePolicy(sizePolicy)
self.doubleSpinBox_8.setMaximumSize(QtCore.QSize(55, 16777215))
self.doubleSpinBox_8.setDecimals(1)
self.doubleSpinBox_8.setMaximum(1e+21)
self.doubleSpinBox_8.setSingleStep(0.1)
self.doubleSpinBox_8.setProperty("value", 1.0)
self.doubleSpinBox_8.setObjectName("doubleSpinBox_8")
self.gridLayout_6.addWidget(self.doubleSpinBox_8, 1, 3, 1, 1)
self.verticalLayout_2.addLayout(self.gridLayout_6)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.verticalLayout_3.addWidget(self.scrollArea)
self.tabWidget.addTab(self.tab_2, "")
self.gridLayout_7.addWidget(self.tabWidget, 0, 0, 1, 1)
self.verticalLayout_4.addWidget(self.groupBox_2)
self.groupBox_7 = QtWidgets.QGroupBox(trimAl)
self.groupBox_7.setObjectName("groupBox_7")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_7)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_15 = QtWidgets.QLabel(self.groupBox_7)
self.label_15.setObjectName("label_15")
self.gridLayout_2.addWidget(self.label_15, 0, 0, 1, 1)
self.comboBox = QtWidgets.QComboBox(self.groupBox_7)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.gridLayout_2.addWidget(self.comboBox, 0, 1, 1, 1)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox_7)
self.checkBox_4.setChecked(True)
self.checkBox_4.setObjectName("checkBox_4")
self.gridLayout_2.addWidget(self.checkBox_4, 0, 2, 1, 1)
self.lineEdit_4 = QtWidgets.QLineEdit(self.groupBox_7)
self.lineEdit_4.setObjectName("lineEdit_4")
self.gridLayout_2.addWidget(self.lineEdit_4, 0, 3, 1, 1)
self.checkBox = QtWidgets.QCheckBox(self.groupBox_7)
self.checkBox.setObjectName("checkBox")
self.gridLayout_2.addWidget(self.checkBox, 0, 4, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox_7)
self.checkBox_5.setChecked(False)
self.checkBox_5.setObjectName("checkBox_5")
self.gridLayout_2.addWidget(self.checkBox_5, 1, 0, 1, 1)
self.comboBox_2 = QtWidgets.QComboBox(self.groupBox_7)
self.comboBox_2.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_2.sizePolicy().hasHeightForWidth())
self.comboBox_2.setSizePolicy(sizePolicy)
self.comboBox_2.setObjectName("comboBox_2")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.gridLayout_2.addWidget(self.comboBox_2, 1, 1, 1, 3)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_7)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout_2.addWidget(self.checkBox_2, 1, 4, 1, 1)
self.verticalLayout_4.addWidget(self.groupBox_7)
self.groupBox_3 = QtWidgets.QGroupBox(trimAl)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.pushButton = ArrowPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.verticalLayout_4.addWidget(self.groupBox_3)
self.groupBox = QtWidgets.QGroupBox(trimAl)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.progressBar = QtWidgets.QProgressBar(self.groupBox)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout.addWidget(self.progressBar, 0, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_9.sizePolicy().hasHeightForWidth())
self.pushButton_9.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon2)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.verticalLayout_4.addWidget(self.groupBox)
self.retranslateUi(trimAl)
self.comboBox_6.setCurrentIndex(-1)
self.tabWidget.setCurrentIndex(1)
self.checkBox_4.toggled['bool'].connect(self.lineEdit_4.setEnabled)
self.checkBox_5.toggled['bool'].connect(self.comboBox_2.setEnabled)
self.radioButton.toggled['bool'].connect(self.comboBox_4.setEnabled)
self.radioButton_2.toggled['bool'].connect(self.lineEdit_2.setEnabled)
self.checkBox_9.toggled['bool'].connect(self.doubleSpinBox_4.setEnabled)
QtCore.QMetaObject.connectSlotsByName(trimAl)
trimAl.setTabOrder(self.pushButton_3, self.comboBox_4)
trimAl.setTabOrder(self.comboBox_4, self.pushButton)
trimAl.setTabOrder(self.pushButton, self.pushButton_2)
trimAl.setTabOrder(self.pushButton_2, self.pushButton_9)
def retranslateUi(self, trimAl):
_translate = QtCore.QCoreApplication.translate
trimAl.setWindowTitle(_translate("trimAl", "trimAl"))
self.groupBox_4.setTitle(_translate("trimAl", "Input"))
self.lineEdit_3.setPlaceholderText(_translate("trimAl", "(Optional!) User-defined similarity matrix (default is Blosum62)"))
self.radioButton.setText(_translate("trimAl", "Input:"))
self.radioButton_2.setText(_translate("trimAl", "Compare set:"))
self.label_18.setText(_translate("trimAl", "Matrix:"))
self.label_40.setToolTip(_translate("trimAl", "Amino acid score matrix to use"))
self.label_40.setText(_translate("trimAl", "Thread:"))
self.comboBox_6.setToolTip(_translate("trimAl", "Amino acid score matrix to use"))
self.label_5.setText(_translate("trimAl", "<html><head/><body><p>Click <a href=\"http://trimal.cgenomics.org/trimal\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about trimAl.</p></body></html>"))
self.label_7.setToolTip(_translate("trimAl", "Brief example"))
self.lineEdit_2.setPlaceholderText(_translate("trimAl", "Files containing the alignments to compare"))
self.groupBox_2.setTitle(_translate("trimAl", "Parameter"))
self.radioButton_11.setToolTip(_translate("trimAl", "Remove all positions with gaps in the alignment."))
self.radioButton_11.setText(_translate("trimAl", "nogaps"))
self.radioButton_10.setToolTip(_translate("trimAl", "Use a heuristic selection of the automatic method based on similarity statistics."))
self.radioButton_10.setText(_translate("trimAl", "automated1"))
self.radioButton_12.setToolTip(_translate("trimAl", "Remove columns composed only by gaps."))
self.radioButton_12.setText(_translate("trimAl", "noallgaps"))
self.radioButton_14.setToolTip(_translate("trimAl", "Use automatic selection on \"strict\" mode."))
self.radioButton_14.setText(_translate("trimAl", "strict"))
self.radioButton_13.setToolTip(_translate("trimAl", "Use automatic selection on \"gappyout\" mode. This method only uses information based on"))
self.radioButton_13.setText(_translate("trimAl", "gappyout"))
self.radioButton_15.setToolTip(_translate("trimAl", "Use automatic selection on \"strictplus\" mode."))
self.radioButton_15.setText(_translate("trimAl", "strictplus"))
self.label_3.setText(_translate("trimAl", "Tips: Hover mouse over each checkbox to see the explanation"))
self.tabWidget.setTabText(self.tabWidget.indexOf(self.tab), _translate("trimAl", "Automated Trimming"))
self.label.setToolTip(_translate("trimAl", "Minimum percentage of positions to conserve [0-100]"))
self.label.setText(_translate("trimAl", "Minimum percentage of positions to conserve [0-100]:"))
self.label_8.setToolTip(_translate("trimAl", "Gap threshold, fraction of positions without gaps in a column [0-1]"))
self.label_8.setText(_translate("trimAl", "Gap threshold, fraction of positions without gaps in a column [0-1]:"))
self.label_9.setToolTip(_translate("trimAl", "Similarity threshold, minimum level of residue similarity within a column [0-1]"))
self.label_9.setText(_translate("trimAl", "Similarity threshold, minimum level of residue similarity within a column [0-1]:"))
self.checkBox_9.setToolTip(_translate("trimAl", "consistency threshold, minimum consistency value required [0-1]"))
self.checkBox_9.setText(_translate("trimAl", "consistency threshold, minimum consistency value required [0-1]:"))
self.checkBox_3.setToolTip(_translate("trimAl", "General window size, applied to all stats"))
self.checkBox_3.setText(_translate("trimAl", "General window size, applied to all stats:"))
self.checkBox_6.setToolTip(_translate("trimAl", "Window size applied to Gaps"))
self.checkBox_6.setText(_translate("trimAl", "Window size applied to Gaps:"))
self.checkBox_7.setToolTip(_translate("trimAl", "Window size applied to Similarity"))
self.checkBox_7.setText(_translate("trimAl", "Window size applied to Similarity:"))
self.checkBox_8.setToolTip(_translate("trimAl", "Window size applied to Consistency"))
self.checkBox_8.setText(_translate("trimAl", "Window size applied to Consistency:"))
self.tabWidget.setTabText(self.tabWidget.indexOf(self.tab_2), _translate("trimAl", "Manual Trimming"))
self.groupBox_7.setTitle(_translate("trimAl", "Output"))
self.label_15.setText(_translate("trimAl", "Output formats:"))
self.comboBox.setItemText(0, _translate("trimAl", "fasta"))
self.comboBox.setItemText(1, _translate("trimAl", "phylip"))
self.comboBox.setItemText(2, _translate("trimAl", "phylip3.2"))
self.comboBox.setItemText(3, _translate("trimAl", "nexus"))
self.comboBox.setItemText(4, _translate("trimAl", "mega"))
self.comboBox.setItemText(5, _translate("trimAl", "clustal"))
self.comboBox.setItemText(6, _translate("trimAl", "nbrf"))
self.checkBox_4.setText(_translate("trimAl", "htmlout:"))
self.lineEdit_4.setText(_translate("trimAl", "summary.html"))
self.checkBox.setText(_translate("trimAl", "complementary"))
self.checkBox_5.setText(_translate("trimAl", "Statistics output:"))
self.comboBox_2.setItemText(0, _translate("trimAl", "sgc: Print gap percentage count for columns in the input alignment."))
self.comboBox_2.setItemText(1, _translate("trimAl", "sgt: Print accumulated gap percentage count."))
self.comboBox_2.setItemText(2, _translate("trimAl", "scc: Print conservation values for columns in the input alignment."))
self.comboBox_2.setItemText(3, _translate("trimAl", "sct: Print accumulated conservation values count."))
self.comboBox_2.setItemText(4, _translate("trimAl", "sfc: Print compare values for columns in the selected alignment from compare files method."))
self.comboBox_2.setItemText(5, _translate("trimAl", "sft: Print accumulated compare values count for the selected alignment from compare files method."))
self.comboBox_2.setItemText(6, _translate("trimAl", "sident: Print identity statistics for all sequences in the alignemnt."))
self.checkBox_2.setText(_translate("trimAl", "colnumbering"))
self.groupBox_3.setTitle(_translate("trimAl", "Run"))
self.pushButton_2.setText(_translate("trimAl", "Stop"))
self.pushButton.setText(_translate("trimAl", "Start"))
self.groupBox.setTitle(_translate("trimAl", "Progress"))
self.pushButton_9.setText(_translate("trimAl", "Show log"))
class Ui_Partition_editor(object):
def setupUi(self, Partition_editor):
Partition_editor.setObjectName("Partition_editor")
Partition_editor.resize(758, 525)
self.verticalLayout_3 = QtWidgets.QVBoxLayout(Partition_editor)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.splitter = QtWidgets.QSplitter(Partition_editor)
self.splitter.setOrientation(QtCore.Qt.Vertical)
self.splitter.setObjectName("splitter")
self.layoutWidget = QtWidgets.QWidget(self.splitter)
self.layoutWidget.setObjectName("layoutWidget")
self.verticalLayout = QtWidgets.QVBoxLayout(self.layoutWidget)
self.verticalLayout.setContentsMargins(0, 0, 0, 0)
self.verticalLayout.setObjectName("verticalLayout")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label = QtWidgets.QLabel(self.layoutWidget)
self.label.setObjectName("label")
self.horizontalLayout.addWidget(self.label)
spacerItem = QtWidgets.QSpacerItem(18, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.pushButton_codon = QtWidgets.QPushButton(self.layoutWidget)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/converter.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_codon.setIcon(icon)
self.pushButton_codon.setObjectName("pushButton_codon")
self.horizontalLayout_4.addWidget(self.pushButton_codon)
self.pushButton_nocodon = QtWidgets.QPushButton(self.layoutWidget)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_nocodon.setIcon(icon1)
self.pushButton_nocodon.setObjectName("pushButton_nocodon")
self.horizontalLayout_4.addWidget(self.pushButton_nocodon)
self.horizontalLayout.addLayout(self.horizontalLayout_4)
spacerItem1 = QtWidgets.QSpacerItem(18, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.pushButton_2 = QtWidgets.QPushButton(self.layoutWidget)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/table_row_add_after.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_2.addWidget(self.pushButton_2)
self.pushButton = QtWidgets.QPushButton(self.layoutWidget)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_2.addWidget(self.pushButton)
self.horizontalLayout.addLayout(self.horizontalLayout_2)
self.verticalLayout.addLayout(self.horizontalLayout)
self.tableView_partition = QtWidgets.QTableView(self.layoutWidget)
self.tableView_partition.setSortingEnabled(False)
self.tableView_partition.setObjectName("tableView_partition")
self.verticalLayout.addWidget(self.tableView_partition)
self.layoutWidget1 = QtWidgets.QWidget(self.splitter)
self.layoutWidget1.setObjectName("layoutWidget1")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.layoutWidget1)
self.verticalLayout_2.setContentsMargins(0, 0, 0, 0)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_2 = QtWidgets.QLabel(self.layoutWidget1)
self.label_2.setObjectName("label_2")
self.horizontalLayout_3.addWidget(self.label_2)
spacerItem2 = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_3.addItem(spacerItem2)
self.pushButton_recog = QtWidgets.QPushButton(self.layoutWidget1)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/refresh-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_recog.setIcon(icon3)
self.pushButton_recog.setObjectName("pushButton_recog")
self.horizontalLayout_3.addWidget(self.pushButton_recog)
self.verticalLayout_2.addLayout(self.horizontalLayout_3)
self.textEdit = QtWidgets.QTextEdit(self.layoutWidget1)
self.textEdit.setPlaceholderText("")
self.textEdit.setObjectName("textEdit")
self.verticalLayout_2.addWidget(self.textEdit)
self.verticalLayout_3.addWidget(self.splitter)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
spacerItem3 = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_5.addItem(spacerItem3)
self.label_3 = QtWidgets.QLabel(Partition_editor)
self.label_3.setObjectName("label_3")
self.horizontalLayout_5.addWidget(self.label_3)
self.label_4 = ClickedLableGif(Partition_editor)
self.label_4.setText("")
self.label_4.setObjectName("label_4")
self.horizontalLayout_5.addWidget(self.label_4)
self.verticalLayout_3.addLayout(self.horizontalLayout_5)
self.retranslateUi(Partition_editor)
QtCore.QMetaObject.connectSlotsByName(Partition_editor)
def retranslateUi(self, Partition_editor):
_translate = QtCore.QCoreApplication.translate
Partition_editor.setWindowTitle(
_translate("Partition_editor", "Partition editor"))
self.label.setText(
_translate("Partition_editor", "Specify the data blocks:"))
self.pushButton_codon.setText(
_translate("Partition_editor", "Codon Mode"))
self.pushButton_nocodon.setText(
_translate("Partition_editor", "Cancel Codon Mode"))
self.pushButton_2.setText(_translate("Partition_editor", "Add Row"))
self.pushButton.setText(_translate("Partition_editor", "Delete Row"))
self.label_2.setText(
_translate("Partition_editor",
"Automatically recognize partition from text:"))
self.pushButton_recog.setText(
_translate("Partition_editor", "Recognize"))
self.textEdit.setToolTip(
_translate(
"Partition_editor", "For example:\n"
"atp6 = 1-693;\n"
"atp8 = 694-882;\n"
"cox1 = 883-2475;\n"
"cox2 = 2476-3225;\n"
"cox3 = 3226-4089;"))
self.label_3.setText(_translate("Partition_editor", "Demo:"))
self.label_4.setToolTip(_translate("Partition_editor",
"Brief example"))
class Ui_Matrix(object):
def setupUi(self, Matrix):
Matrix.setObjectName("Matrix")
Matrix.resize(657, 492)
Matrix.setSizeGripEnabled(True)
self.verticalLayout = QtWidgets.QVBoxLayout(Matrix)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox_4 = QtWidgets.QGroupBox(Matrix)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout_2.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout_2.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.checkBox_6 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_6.setObjectName("checkBox_6")
self.horizontalLayout_2.addWidget(self.checkBox_6)
self.line = QtWidgets.QFrame(self.groupBox_4)
self.line.setFrameShape(QtWidgets.QFrame.VLine)
self.line.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line.setObjectName("line")
self.horizontalLayout_2.addWidget(self.line)
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.horizontalLayout_2.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem)
self.label_2 = ClickedLableGif(self.groupBox_4)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout_2.addWidget(self.label_2)
self.gridLayout_2.addLayout(self.horizontalLayout_2, 1, 0, 1, 3)
self.verticalLayout.addWidget(self.groupBox_4)
self.groupBox = QtWidgets.QGroupBox(Matrix)
self.groupBox.setObjectName("groupBox")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout_4.setObjectName("gridLayout_4")
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setObjectName("checkBox")
self.gridLayout_4.addWidget(self.checkBox, 0, 0, 1, 1)
self.checkBox_12 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_12.setObjectName("checkBox_12")
self.gridLayout_4.addWidget(self.checkBox_12, 0, 1, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout_4.addWidget(self.checkBox_2, 1, 0, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_5.setObjectName("checkBox_5")
self.gridLayout_4.addWidget(self.checkBox_5, 1, 1, 1, 1)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout_4.addWidget(self.checkBox_3, 2, 0, 1, 1)
self.checkBox_13 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_13.setObjectName("checkBox_13")
self.gridLayout_4.addWidget(self.checkBox_13, 2, 1, 1, 1)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setObjectName("checkBox_4")
self.gridLayout_4.addWidget(self.checkBox_4, 3, 0, 1, 1)
self.checkBox_9 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_9.setObjectName("checkBox_9")
self.gridLayout_4.addWidget(self.checkBox_9, 3, 1, 1, 1)
self.groupBox_top_line = QtWidgets.QGroupBox(self.groupBox)
self.groupBox_top_line.setStyleSheet("")
self.groupBox_top_line.setFlat(True)
self.groupBox_top_line.setCheckable(True)
self.groupBox_top_line.setChecked(False)
self.groupBox_top_line.setObjectName("groupBox_top_line")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox_top_line)
self.gridLayout.setContentsMargins(0, 9, 0, 0)
self.gridLayout.setObjectName("gridLayout")
self.label_9 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_9.setEnabled(True)
self.label_9.setObjectName("label_9")
self.gridLayout.addWidget(self.label_9, 0, 0, 1, 1)
self.spinBox_5 = QtWidgets.QSpinBox(self.groupBox_top_line)
self.spinBox_5.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_5.sizePolicy().hasHeightForWidth())
self.spinBox_5.setSizePolicy(sizePolicy)
self.spinBox_5.setMinimum(1)
self.spinBox_5.setMaximum(99999)
self.spinBox_5.setProperty("value", 5)
self.spinBox_5.setObjectName("spinBox_5")
self.gridLayout.addWidget(self.spinBox_5, 0, 1, 1, 1)
self.label_15 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_15.setEnabled(True)
self.label_15.setObjectName("label_15")
self.gridLayout.addWidget(self.label_15, 0, 2, 1, 1)
self.spinBox_6 = QtWidgets.QSpinBox(self.groupBox_top_line)
self.spinBox_6.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_6.sizePolicy().hasHeightForWidth())
self.spinBox_6.setSizePolicy(sizePolicy)
self.spinBox_6.setMinimum(1)
self.spinBox_6.setMaximum(99999)
self.spinBox_6.setProperty("value", 8)
self.spinBox_6.setObjectName("spinBox_6")
self.gridLayout.addWidget(self.spinBox_6, 0, 3, 1, 1)
self.label_10 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_10.setEnabled(True)
self.label_10.setObjectName("label_10")
self.gridLayout.addWidget(self.label_10, 1, 0, 1, 1)
self.spinBox_7 = QtWidgets.QSpinBox(self.groupBox_top_line)
self.spinBox_7.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_7.sizePolicy().hasHeightForWidth())
self.spinBox_7.setSizePolicy(sizePolicy)
self.spinBox_7.setMinimum(1)
self.spinBox_7.setMaximum(99999)
self.spinBox_7.setProperty("value", 15)
self.spinBox_7.setObjectName("spinBox_7")
self.gridLayout.addWidget(self.spinBox_7, 1, 1, 1, 1)
self.label_11 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_11.setEnabled(True)
self.label_11.setObjectName("label_11")
self.gridLayout.addWidget(self.label_11, 1, 2, 1, 1)
self.spinBox_8 = QtWidgets.QSpinBox(self.groupBox_top_line)
self.spinBox_8.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_8.sizePolicy().hasHeightForWidth())
self.spinBox_8.setSizePolicy(sizePolicy)
self.spinBox_8.setSuffix("")
self.spinBox_8.setMinimum(-360)
self.spinBox_8.setMaximum(360)
self.spinBox_8.setProperty("value", 45)
self.spinBox_8.setObjectName("spinBox_8")
self.gridLayout.addWidget(self.spinBox_8, 1, 3, 1, 1)
self.label_12 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_12.setEnabled(True)
self.label_12.setObjectName("label_12")
self.gridLayout.addWidget(self.label_12, 2, 0, 1, 1)
self.comboBox = QtWidgets.QComboBox(self.groupBox_top_line)
self.comboBox.setEnabled(True)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.gridLayout.addWidget(self.comboBox, 2, 1, 1, 1)
self.label_13 = QtWidgets.QLabel(self.groupBox_top_line)
self.label_13.setEnabled(True)
self.label_13.setObjectName("label_13")
self.gridLayout.addWidget(self.label_13, 2, 2, 1, 1)
self.pushButton_color = QtWidgets.QPushButton(self.groupBox_top_line)
self.pushButton_color.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_color.sizePolicy().hasHeightForWidth())
self.pushButton_color.setSizePolicy(sizePolicy)
self.pushButton_color.setAutoFillBackground(False)
self.pushButton_color.setStyleSheet("")
self.pushButton_color.setObjectName("pushButton_color")
self.gridLayout.addWidget(self.pushButton_color, 2, 3, 1, 1)
self.gridLayout_4.addWidget(self.groupBox_top_line, 5, 0, 1, 2)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label = QtWidgets.QLabel(self.groupBox)
self.label.setObjectName("label")
self.horizontalLayout.addWidget(self.label)
self.lineEdit = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit.setObjectName("lineEdit")
self.horizontalLayout.addWidget(self.lineEdit)
self.gridLayout_4.addLayout(self.horizontalLayout, 4, 0, 1, 2)
self.verticalLayout.addWidget(self.groupBox)
self.groupBox_3 = QtWidgets.QGroupBox(Matrix)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox_5 = QtWidgets.QGroupBox(Matrix)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_5.setObjectName("gridLayout_5")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_5)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_5.addWidget(self.progressBar, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_5)
self.retranslateUi(Matrix)
QtCore.QMetaObject.connectSlotsByName(Matrix)
def retranslateUi(self, Matrix):
_translate = QtCore.QCoreApplication.translate
Matrix.setWindowTitle(_translate("Matrix", "Concatenate Sequence"))
self.groupBox_4.setTitle(_translate("Matrix", "Input"))
self.label_4.setText(_translate("Matrix", "Input:"))
self.checkBox_6.setToolTip(
_translate("Matrix",
"Sort the input files according to file name"))
self.checkBox_6.setText(_translate("Matrix", "Sort"))
self.label_5.setText(
_translate(
"Matrix",
"<html><head/><body><p>Try to drag your <span style=\" font-weight:600; color:#ff0000;\">alignments</span> file and drop here if you want to use custom files</p></body></html>"
))
self.label_2.setToolTip(_translate("Matrix", "Brief example"))
self.groupBox.setTitle(_translate("Matrix", "Parameter"))
self.checkBox.setText(_translate("Matrix", "Phylip Format"))
self.checkBox_12.setText(_translate("Matrix", "Fasta Format"))
self.checkBox_2.setText(
_translate("Matrix", "Nexus Format (sequential)"))
self.checkBox_5.setText(_translate("Matrix", "Paml Format"))
self.checkBox_3.setText(
_translate("Matrix", "Nexus Format (interleave)"))
self.checkBox_13.setText(
_translate("Matrix", "Axt Format (for KaKs_Calculator2)"))
self.checkBox_4.setText(
_translate("Matrix",
"Nexus Format (interleave: delimit by genes)"))
self.checkBox_9.setText(
_translate("Matrix", "Sequence Statistics File"))
self.groupBox_top_line.setTitle(_translate("Matrix", "Linear figure"))
self.label_9.setText(_translate("Matrix", "Figure height:"))
self.spinBox_5.setSuffix(_translate("Matrix", " cm"))
self.label_15.setText(_translate("Matrix", "Figure width:"))
self.spinBox_6.setSuffix(_translate("Matrix", " cm"))
self.label_10.setText(_translate("Matrix", "Label size:"))
self.label_11.setText(_translate("Matrix", "Label angle:"))
self.label_12.setText(_translate("Matrix", "Label position:"))
self.comboBox.setItemText(0, _translate("Matrix", "start"))
self.comboBox.setItemText(1, _translate("Matrix", "middle"))
self.comboBox.setItemText(2, _translate("Matrix", "end"))
self.label_13.setText(_translate("Matrix", "Label color:"))
self.pushButton_color.setToolTip(
_translate("Matrix", "Click to change color"))
self.pushButton_color.setText(_translate("Matrix", "#F9C997"))
self.label.setText(_translate("Matrix", "Export file name:"))
self.lineEdit.setText(_translate("Matrix", "concatenation"))
self.groupBox_3.setTitle(_translate("Matrix", "Run"))
self.pushButton.setText(_translate("Matrix", "Start"))
self.pushButton_2.setText(_translate("Matrix", "Stop"))
self.groupBox_5.setTitle(_translate("Matrix", "Progress"))
class Ui_PartitionFinder(object):
def setupUi(self, PartitionFinder):
PartitionFinder.setObjectName("PartitionFinder")
PartitionFinder.resize(653, 531)
self.gridLayout_9 = QtWidgets.QGridLayout(PartitionFinder)
self.gridLayout_9.setObjectName("gridLayout_9")
self.groupBox_4 = QtWidgets.QGroupBox(PartitionFinder)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 0, 0, 1, 1)
self.lineEdit = InputQLineEdit(self.groupBox_4)
self.lineEdit.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit.setText("")
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout.addWidget(self.lineEdit, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox_4)
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 1, 0, 1, 1)
self.lineEdit_2 = InputQLineEdit(self.groupBox_4)
self.lineEdit_2.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_2.setReadOnly(True)
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout.addWidget(self.lineEdit_2, 1, 1, 1, 1)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout.addWidget(self.pushButton_4, 1, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.label_13 = QtWidgets.QLabel(self.groupBox_4)
self.label_13.setObjectName("label_13")
self.horizontalLayout.addWidget(self.label_13)
self.label_12 = ClickedLableGif(self.groupBox_4)
self.label_12.setText("")
self.label_12.setObjectName("label_12")
self.horizontalLayout.addWidget(self.label_12)
self.gridLayout.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.gridLayout_9.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(PartitionFinder)
self.groupBox.setObjectName("groupBox")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout_2.setContentsMargins(2, 4, 2, 2)
self.gridLayout_2.setObjectName("gridLayout_2")
self.tabWidget = QtWidgets.QTabWidget(self.groupBox)
self.tabWidget.setObjectName("tabWidget")
self.tab = QtWidgets.QWidget()
self.tab.setObjectName("tab")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.tab)
self.horizontalLayout_2.setContentsMargins(5, 2, 2, 0)
self.horizontalLayout_2.setSpacing(6)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.gridLayout_6 = QtWidgets.QGridLayout()
self.gridLayout_6.setObjectName("gridLayout_6")
self.label = QtWidgets.QLabel(self.tab)
self.label.setAlignment(QtCore.Qt.AlignRight | QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label.setObjectName("label")
self.gridLayout_6.addWidget(self.label, 0, 0, 1, 1)
self.comboBox = QtWidgets.QComboBox(self.tab)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.gridLayout_6.addWidget(self.comboBox, 0, 1, 1, 1)
self.label_2 = QtWidgets.QLabel(self.tab)
self.label_2.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_2.setObjectName("label_2")
self.gridLayout_6.addWidget(self.label_2, 1, 0, 1, 1)
self.comboBox_2 = QtWidgets.QComboBox(self.tab)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_2.sizePolicy().hasHeightForWidth())
self.comboBox_2.setSizePolicy(sizePolicy)
self.comboBox_2.setObjectName("comboBox_2")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.gridLayout_6.addWidget(self.comboBox_2, 1, 1, 1, 1)
self.label_3 = QtWidgets.QLabel(self.tab)
self.label_3.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_3.setObjectName("label_3")
self.gridLayout_6.addWidget(self.label_3, 2, 0, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.tab)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_6.addWidget(self.comboBox_3, 2, 1, 1, 1)
self.label_5 = QtWidgets.QLabel(self.tab)
self.label_5.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_5.setObjectName("label_5")
self.gridLayout_6.addWidget(self.label_5, 3, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.tab)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout_6.addWidget(self.comboBox_4, 3, 1, 1, 1)
self.pushButton_cmd1 = QtWidgets.QPushButton(self.tab)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_cmd1.sizePolicy().hasHeightForWidth())
self.pushButton_cmd1.setSizePolicy(sizePolicy)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/terminal-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_cmd1.setIcon(icon)
self.pushButton_cmd1.setObjectName("pushButton_cmd1")
self.gridLayout_6.addWidget(self.pushButton_cmd1, 4, 0, 1, 2)
self.horizontalLayout_2.addLayout(self.gridLayout_6)
self.groupBox_2 = QtWidgets.QGroupBox(self.tab)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_4.setContentsMargins(2, 9, 2, 2)
self.gridLayout_4.setSpacing(0)
self.gridLayout_4.setObjectName("gridLayout_4")
self.textEdit = DblClickTexedit(self.groupBox_2)
self.textEdit.setLineWrapMode(QtWidgets.QTextEdit.NoWrap)
self.textEdit.setReadOnly(True)
self.textEdit.setObjectName("textEdit")
self.gridLayout_4.addWidget(self.textEdit, 0, 0, 1, 2)
self.horizontalLayout_2.addWidget(self.groupBox_2)
self.horizontalLayout_2.setStretch(0, 9)
self.horizontalLayout_2.setStretch(1, 7)
self.tabWidget.addTab(self.tab, "")
self.tab_2 = QtWidgets.QWidget()
self.tab_2.setObjectName("tab_2")
self.horizontalLayout_3 = QtWidgets.QHBoxLayout(self.tab_2)
self.horizontalLayout_3.setContentsMargins(5, 2, 2, 0)
self.horizontalLayout_3.setSpacing(6)
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.gridLayout_3 = QtWidgets.QGridLayout()
self.gridLayout_3.setObjectName("gridLayout_3")
self.label_10 = QtWidgets.QLabel(self.tab_2)
self.label_10.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_10.setObjectName("label_10")
self.gridLayout_3.addWidget(self.label_10, 0, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.tab_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setObjectName("comboBox_6")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.gridLayout_3.addWidget(self.comboBox_6, 0, 1, 1, 1)
self.label_7 = QtWidgets.QLabel(self.tab_2)
self.label_7.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_7.setObjectName("label_7")
self.gridLayout_3.addWidget(self.label_7, 1, 0, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.tab_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_3.addWidget(self.comboBox_8, 1, 1, 1, 1)
self.label_8 = QtWidgets.QLabel(self.tab_2)
self.label_8.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_8.setObjectName("label_8")
self.gridLayout_3.addWidget(self.label_8, 2, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.tab_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setObjectName("comboBox_7")
self.comboBox_7.addItem("")
self.comboBox_7.addItem("")
self.comboBox_7.addItem("")
self.gridLayout_3.addWidget(self.comboBox_7, 2, 1, 1, 1)
self.label_9 = QtWidgets.QLabel(self.tab_2)
self.label_9.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_9.setObjectName("label_9")
self.gridLayout_3.addWidget(self.label_9, 3, 0, 1, 1)
self.comboBox_5 = QtWidgets.QComboBox(self.tab_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout_3.addWidget(self.comboBox_5, 3, 1, 1, 1)
self.pushButton_cmd2 = QtWidgets.QPushButton(self.tab_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_cmd2.sizePolicy().hasHeightForWidth())
self.pushButton_cmd2.setSizePolicy(sizePolicy)
self.pushButton_cmd2.setIcon(icon)
self.pushButton_cmd2.setObjectName("pushButton_cmd2")
self.gridLayout_3.addWidget(self.pushButton_cmd2, 4, 0, 1, 2)
self.horizontalLayout_3.addLayout(self.gridLayout_3)
self.groupBox_3 = QtWidgets.QGroupBox(self.tab_2)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_5.setContentsMargins(2, 9, 2, 2)
self.gridLayout_5.setSpacing(0)
self.gridLayout_5.setObjectName("gridLayout_5")
self.textEdit_2 = DblClickTexedit(self.groupBox_3)
self.textEdit_2.setLineWrapMode(QtWidgets.QTextEdit.NoWrap)
self.textEdit_2.setReadOnly(True)
self.textEdit_2.setTextInteractionFlags(
QtCore.Qt.TextSelectableByMouse)
self.textEdit_2.setObjectName("textEdit_2")
self.gridLayout_5.addWidget(self.textEdit_2, 0, 0, 1, 2)
self.horizontalLayout_3.addWidget(self.groupBox_3)
self.horizontalLayout_3.setStretch(0, 9)
self.horizontalLayout_3.setStretch(1, 7)
self.tabWidget.addTab(self.tab_2, "")
self.gridLayout_2.addWidget(self.tabWidget, 0, 0, 1, 1)
self.gridLayout_9.addWidget(self.groupBox, 1, 0, 1, 1)
self.groupBox_5 = QtWidgets.QGroupBox(PartitionFinder)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_8 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_8.setObjectName("gridLayout_8")
self.pushButton_7 = QtWidgets.QPushButton(self.groupBox_5)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/gears.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_7.setIcon(icon1)
self.pushButton_7.setObjectName("pushButton_7")
self.gridLayout_8.addWidget(self.pushButton_7, 0, 0, 1, 1)
self.pushButton_8 = QtWidgets.QPushButton(self.groupBox_5)
self.pushButton_8.setIcon(icon)
self.pushButton_8.setObjectName("pushButton_8")
self.gridLayout_8.addWidget(self.pushButton_8, 0, 1, 1, 1)
self.pushButton_5 = ArrowPushButton(self.groupBox_5)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_5.setIcon(icon2)
self.pushButton_5.setObjectName("pushButton_5")
self.gridLayout_8.addWidget(self.pushButton_5, 1, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_5)
icon3 = QtGui.QIcon()
icon3.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon3)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_8.addWidget(self.pushButton_2, 1, 1, 1, 1)
self.gridLayout_8.setColumnStretch(0, 1)
self.gridLayout_8.setColumnStretch(1, 1)
self.gridLayout_9.addWidget(self.groupBox_5, 2, 0, 1, 1)
self.groupBox_6 = QtWidgets.QGroupBox(PartitionFinder)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.label_11 = QtWidgets.QLabel(self.groupBox_6)
self.label_11.setObjectName("label_11")
self.gridLayout_7.addWidget(self.label_11, 0, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 1, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon4 = QtGui.QIcon()
icon4.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon4)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 2, 0, 1, 1)
self.gridLayout_9.addWidget(self.groupBox_6, 3, 0, 1, 1)
self.retranslateUi(PartitionFinder)
self.tabWidget.setCurrentIndex(0)
QtCore.QMetaObject.connectSlotsByName(PartitionFinder)
PartitionFinder.setTabOrder(self.pushButton_5, self.lineEdit_2)
PartitionFinder.setTabOrder(self.lineEdit_2, self.tabWidget)
PartitionFinder.setTabOrder(self.tabWidget, self.pushButton_7)
PartitionFinder.setTabOrder(self.pushButton_7, self.pushButton_4)
PartitionFinder.setTabOrder(self.pushButton_4, self.lineEdit)
PartitionFinder.setTabOrder(self.lineEdit, self.pushButton_8)
PartitionFinder.setTabOrder(self.pushButton_8, self.pushButton_3)
PartitionFinder.setTabOrder(self.pushButton_3, self.pushButton_2)
PartitionFinder.setTabOrder(self.pushButton_2, self.pushButton_9)
PartitionFinder.setTabOrder(self.pushButton_9, self.comboBox)
PartitionFinder.setTabOrder(self.comboBox, self.textEdit)
PartitionFinder.setTabOrder(self.textEdit, self.comboBox_2)
PartitionFinder.setTabOrder(self.comboBox_2, self.comboBox_3)
PartitionFinder.setTabOrder(self.comboBox_3, self.comboBox_4)
PartitionFinder.setTabOrder(self.comboBox_4, self.pushButton_cmd1)
PartitionFinder.setTabOrder(self.pushButton_cmd1, self.comboBox_6)
PartitionFinder.setTabOrder(self.comboBox_6, self.textEdit_2)
PartitionFinder.setTabOrder(self.textEdit_2, self.comboBox_8)
PartitionFinder.setTabOrder(self.comboBox_8, self.comboBox_7)
PartitionFinder.setTabOrder(self.comboBox_7, self.comboBox_5)
PartitionFinder.setTabOrder(self.comboBox_5, self.pushButton_cmd2)
def retranslateUi(self, PartitionFinder):
_translate = QtCore.QCoreApplication.translate
PartitionFinder.setWindowTitle(
_translate("PartitionFinder", "PartitionFinder"))
self.groupBox_4.setTitle(_translate("PartitionFinder", "Input"))
self.label_4.setText(_translate("PartitionFinder", "Alignment File:"))
self.lineEdit.setPlaceholderText(
_translate("PartitionFinder",
"The alignment should be phylip format"))
self.label_6.setText(_translate("PartitionFinder", "Tree File:"))
self.lineEdit_2.setPlaceholderText(
_translate("PartitionFinder", "Optional! (in newick format)"))
self.label_14.setText(
_translate(
"PartitionFinder",
"<html><head/><body><p>Click <a href=\"http://www.robertlanfear.com/partitionfinder/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">PartitionFinder2</span></p></body></html>"
))
self.label_13.setText(_translate("PartitionFinder", "Demo:"))
self.label_12.setToolTip(_translate("PartitionFinder",
"Brief example"))
self.groupBox.setTitle(_translate("PartitionFinder", "Configuration"))
self.label.setText(_translate("PartitionFinder", "branchlengths = "))
self.comboBox.setItemText(0, _translate("PartitionFinder", "linked"))
self.comboBox.setItemText(1, _translate("PartitionFinder", "unlinked"))
self.label_2.setText(_translate("PartitionFinder", "models = "))
self.comboBox_2.setItemText(0, _translate("PartitionFinder", "all"))
self.comboBox_2.setItemText(1, _translate("PartitionFinder", "allx"))
self.comboBox_2.setItemText(2, _translate("PartitionFinder", "beast"))
self.comboBox_2.setItemText(3, _translate("PartitionFinder",
"mrbayes"))
self.comboBox_2.setItemText(4, _translate("PartitionFinder", "gamma"))
self.comboBox_2.setItemText(5, _translate("PartitionFinder", "gammai"))
self.comboBox_2.setItemText(6, _translate("PartitionFinder", "<list>"))
self.label_3.setText(
_translate("PartitionFinder", "model_selection = "))
self.comboBox_3.setItemText(0, _translate("PartitionFinder", "AICc"))
self.comboBox_3.setItemText(1, _translate("PartitionFinder", "BIC"))
self.comboBox_3.setItemText(2, _translate("PartitionFinder", "AIC"))
self.label_5.setText(_translate("PartitionFinder", "search = "))
self.comboBox_4.setItemText(0, _translate("PartitionFinder", "all"))
self.comboBox_4.setItemText(1, _translate("PartitionFinder", "greedy"))
self.comboBox_4.setItemText(2, _translate("PartitionFinder",
"rcluster"))
self.comboBox_4.setItemText(3,
_translate("PartitionFinder", "rclusterf"))
self.comboBox_4.setItemText(4, _translate("PartitionFinder",
"hcluster"))
self.comboBox_4.setItemText(5, _translate("PartitionFinder", "kmeans"))
self.comboBox_4.setItemText(
6, _translate("PartitionFinder", "user define"))
self.pushButton_cmd1.setText(
_translate("PartitionFinder", "Command line options"))
self.groupBox_2.setTitle(_translate("PartitionFinder", "DATA BLOCKS"))
self.textEdit.setToolTip(
_translate(
"PartitionFinder", "For example:\n"
"atp6 = 1-693;\n"
"atp8 = 694-882;\n"
"cox1 = 883-2475;\n"
"cox2 = 2476-3225;\n"
"cox3 = 3226-4089;"))
self.tabWidget.setTabText(self.tabWidget.indexOf(self.tab),
_translate("PartitionFinder", "Nucleotide"))
self.label_10.setText(_translate("PartitionFinder",
"branchlengths = "))
self.comboBox_6.setItemText(0, _translate("PartitionFinder", "linked"))
self.comboBox_6.setItemText(1, _translate("PartitionFinder",
"unlinked"))
self.label_7.setText(_translate("PartitionFinder", "models = "))
self.comboBox_8.setItemText(0, _translate("PartitionFinder", "all"))
self.comboBox_8.setItemText(1, _translate("PartitionFinder", "allx"))
self.comboBox_8.setItemText(2, _translate("PartitionFinder", "beast"))
self.comboBox_8.setItemText(3, _translate("PartitionFinder",
"mrbayes"))
self.comboBox_8.setItemText(4, _translate("PartitionFinder", "gamma"))
self.comboBox_8.setItemText(5, _translate("PartitionFinder", "gammai"))
self.comboBox_8.setItemText(6, _translate("PartitionFinder", "<list>"))
self.label_8.setText(
_translate("PartitionFinder", "model_selection = "))
self.comboBox_7.setItemText(0, _translate("PartitionFinder", "AICc"))
self.comboBox_7.setItemText(1, _translate("PartitionFinder", "BIC"))
self.comboBox_7.setItemText(2, _translate("PartitionFinder", "AIC"))
self.label_9.setText(_translate("PartitionFinder", "search = "))
self.comboBox_5.setItemText(0, _translate("PartitionFinder", "all"))
self.comboBox_5.setItemText(1, _translate("PartitionFinder", "greedy"))
self.comboBox_5.setItemText(2, _translate("PartitionFinder",
"rcluster"))
self.comboBox_5.setItemText(3,
_translate("PartitionFinder", "rclusterf"))
self.comboBox_5.setItemText(4, _translate("PartitionFinder",
"hcluster"))
self.comboBox_5.setItemText(5, _translate("PartitionFinder", "kmeans"))
self.comboBox_5.setItemText(
6, _translate("PartitionFinder", "user define"))
self.pushButton_cmd2.setText(
_translate("PartitionFinder", "Command line options"))
self.groupBox_3.setTitle(_translate("PartitionFinder", "DATA BLOCKS"))
self.textEdit_2.setToolTip(
_translate(
"PartitionFinder", "For example:\n"
"COI = 1-407;\n"
"COII = 408-624;\n"
"EF1a = 625-949;"))
self.tabWidget.setTabText(self.tabWidget.indexOf(self.tab_2),
_translate("PartitionFinder", "Amino acid"))
self.groupBox_5.setTitle(_translate("PartitionFinder", "Run"))
self.pushButton_7.setText(
_translate("PartitionFinder", "Show configuration"))
self.pushButton_8.setText(_translate("PartitionFinder",
"Show command"))
self.pushButton_5.setText(_translate("PartitionFinder", "Start"))
self.pushButton_2.setText(_translate("PartitionFinder", "Stop"))
self.groupBox_6.setTitle(_translate("PartitionFinder", "Progress"))
self.label_11.setText(
_translate("PartitionFinder", "PartitionFinder analysis"))
self.pushButton_9.setText(_translate("PartitionFinder", "Show log"))
class Ui_MACSE(object):
def setupUi(self, MACSE):
MACSE.setObjectName("MACSE")
MACSE.resize(652, 545)
MACSE.setStyleSheet("")
MACSE.setSizeGripEnabled(True)
self.verticalLayout = QtWidgets.QVBoxLayout(MACSE)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox_4 = QtWidgets.QGroupBox(MACSE)
self.groupBox_4.setObjectName("groupBox_4")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.groupBox_4)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.gridLayout = QtWidgets.QGridLayout()
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.gridLayout.addWidget(self.label_8, 1, 0, 1, 1)
self.comboBox_5 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setAcceptDrops(True)
self.comboBox_5.setEditable(True)
self.comboBox_5.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_5.setObjectName("comboBox_5")
self.gridLayout.addWidget(self.comboBox_5, 1, 1, 1, 1)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout.addWidget(self.pushButton_4, 1, 2, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout.addWidget(self.checkBox_2, 2, 0, 1, 1)
self.comboBox_7 = ListQCombobox(self.groupBox_4)
self.comboBox_7.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setAcceptDrops(True)
self.comboBox_7.setEditable(True)
self.comboBox_7.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_7.setObjectName("comboBox_7")
self.gridLayout.addWidget(self.comboBox_7, 2, 1, 1, 1)
self.pushButton_22 = QtWidgets.QPushButton(self.groupBox_4)
self.pushButton_22.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_22.sizePolicy().hasHeightForWidth())
self.pushButton_22.setSizePolicy(sizePolicy)
self.pushButton_22.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_22.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_22.setStyleSheet("")
self.pushButton_22.setText("")
self.pushButton_22.setObjectName("pushButton_22")
self.gridLayout.addWidget(self.pushButton_22, 2, 2, 1, 1)
self.verticalLayout_3.addLayout(self.gridLayout)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setOpenExternalLinks(True)
self.label_5.setObjectName("label_5")
self.horizontalLayout_3.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(63, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_3.addItem(spacerItem)
self.label_7 = ClickedLableGif(self.groupBox_4)
self.label_7.setText("")
self.label_7.setObjectName("label_7")
self.horizontalLayout_3.addWidget(self.label_7)
self.verticalLayout_3.addLayout(self.horizontalLayout_3)
self.verticalLayout.addWidget(self.groupBox_4)
self.groupBox_2 = QtWidgets.QGroupBox(MACSE)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_2.setContentsMargins(0, 3, 0, 1)
self.gridLayout_2.setHorizontalSpacing(0)
self.gridLayout_2.setObjectName("gridLayout_2")
self.scrollArea = QtWidgets.QScrollArea(self.groupBox_2)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setLineWidth(0)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, 0, 632, 189))
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.gridLayout_3 = QtWidgets.QGridLayout(self.scrollAreaWidgetContents)
self.gridLayout_3.setObjectName("gridLayout_3")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_22 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.horizontalLayout.addWidget(self.label_22)
self.comboBox_9 = QtWidgets.QComboBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.horizontalLayout.addWidget(self.comboBox_9)
self.gridLayout_3.addLayout(self.horizontalLayout, 0, 0, 1, 5)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_33 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_33.setFont(font)
self.label_33.setObjectName("label_33")
self.horizontalLayout_2.addWidget(self.label_33)
self.comboBox = QtWidgets.QComboBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.horizontalLayout_2.addWidget(self.comboBox)
self.gridLayout_3.addLayout(self.horizontalLayout_2, 0, 5, 1, 3)
self.label_23 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_23.setFont(font)
self.label_23.setObjectName("label_23")
self.gridLayout_3.addWidget(self.label_23, 1, 0, 1, 1)
self.doubleSpinBox = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox.setPrefix("")
self.doubleSpinBox.setDecimals(1)
self.doubleSpinBox.setMaximum(9999.0)
self.doubleSpinBox.setProperty("value", 30.0)
self.doubleSpinBox.setObjectName("doubleSpinBox")
self.gridLayout_3.addWidget(self.doubleSpinBox, 1, 1, 1, 1)
self.label_24 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_3.addWidget(self.label_24, 1, 2, 1, 1)
self.doubleSpinBox_2 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_2.setPrefix("")
self.doubleSpinBox_2.setDecimals(1)
self.doubleSpinBox_2.setMaximum(9999.0)
self.doubleSpinBox_2.setProperty("value", 10.0)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.gridLayout_3.addWidget(self.doubleSpinBox_2, 1, 3, 1, 1)
self.label_26 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout_3.addWidget(self.label_26, 1, 4, 1, 1)
self.doubleSpinBox_4 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_4.setPrefix("")
self.doubleSpinBox_4.setDecimals(1)
self.doubleSpinBox_4.setMaximum(9999.0)
self.doubleSpinBox_4.setProperty("value", 10.0)
self.doubleSpinBox_4.setObjectName("doubleSpinBox_4")
self.gridLayout_3.addWidget(self.doubleSpinBox_4, 1, 5, 1, 1)
self.label_25 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout_3.addWidget(self.label_25, 1, 6, 1, 1)
self.doubleSpinBox_3 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_3.setPrefix("")
self.doubleSpinBox_3.setDecimals(1)
self.doubleSpinBox_3.setMaximum(9999.0)
self.doubleSpinBox_3.setProperty("value", 7.0)
self.doubleSpinBox_3.setObjectName("doubleSpinBox_3")
self.gridLayout_3.addWidget(self.doubleSpinBox_3, 1, 7, 1, 1)
self.label_29 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_29.setFont(font)
self.label_29.setObjectName("label_29")
self.gridLayout_3.addWidget(self.label_29, 2, 0, 1, 1)
self.doubleSpinBox_7 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_7.setPrefix("")
self.doubleSpinBox_7.setDecimals(1)
self.doubleSpinBox_7.setMaximum(9999.0)
self.doubleSpinBox_7.setSingleStep(0.1)
self.doubleSpinBox_7.setProperty("value", 1.0)
self.doubleSpinBox_7.setObjectName("doubleSpinBox_7")
self.gridLayout_3.addWidget(self.doubleSpinBox_7, 2, 1, 1, 1)
self.label_31 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_31.setFont(font)
self.label_31.setObjectName("label_31")
self.gridLayout_3.addWidget(self.label_31, 2, 2, 1, 1)
self.doubleSpinBox_8 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_8.setPrefix("")
self.doubleSpinBox_8.setDecimals(1)
self.doubleSpinBox_8.setMaximum(9999.0)
self.doubleSpinBox_8.setSingleStep(0.1)
self.doubleSpinBox_8.setProperty("value", 7.0)
self.doubleSpinBox_8.setObjectName("doubleSpinBox_8")
self.gridLayout_3.addWidget(self.doubleSpinBox_8, 2, 3, 1, 1)
self.label_30 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_30.setFont(font)
self.label_30.setObjectName("label_30")
self.gridLayout_3.addWidget(self.label_30, 2, 4, 1, 1)
self.doubleSpinBox_9 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_9.setPrefix("")
self.doubleSpinBox_9.setDecimals(1)
self.doubleSpinBox_9.setMaximum(9999.0)
self.doubleSpinBox_9.setSingleStep(0.1)
self.doubleSpinBox_9.setProperty("value", 0.9)
self.doubleSpinBox_9.setObjectName("doubleSpinBox_9")
self.gridLayout_3.addWidget(self.doubleSpinBox_9, 2, 5, 1, 1)
self.label_32 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_32.setFont(font)
self.label_32.setObjectName("label_32")
self.gridLayout_3.addWidget(self.label_32, 2, 6, 1, 1)
self.doubleSpinBox_10 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_10.setPrefix("")
self.doubleSpinBox_10.setDecimals(1)
self.doubleSpinBox_10.setMaximum(9999.0)
self.doubleSpinBox_10.setSingleStep(0.1)
self.doubleSpinBox_10.setProperty("value", 6.3)
self.doubleSpinBox_10.setObjectName("doubleSpinBox_10")
self.gridLayout_3.addWidget(self.doubleSpinBox_10, 2, 7, 1, 1)
self.label_27 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setObjectName("label_27")
self.gridLayout_3.addWidget(self.label_27, 3, 0, 1, 1)
self.doubleSpinBox_5 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_5.setPrefix("")
self.doubleSpinBox_5.setDecimals(1)
self.doubleSpinBox_5.setMaximum(9999.0)
self.doubleSpinBox_5.setProperty("value", 50.0)
self.doubleSpinBox_5.setObjectName("doubleSpinBox_5")
self.gridLayout_3.addWidget(self.doubleSpinBox_5, 3, 1, 1, 1)
self.label_28 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_28.setFont(font)
self.label_28.setObjectName("label_28")
self.gridLayout_3.addWidget(self.label_28, 3, 2, 1, 1)
self.doubleSpinBox_6 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_6.setPrefix("")
self.doubleSpinBox_6.setDecimals(1)
self.doubleSpinBox_6.setMaximum(9999.0)
self.doubleSpinBox_6.setProperty("value", 17.0)
self.doubleSpinBox_6.setObjectName("doubleSpinBox_6")
self.gridLayout_3.addWidget(self.doubleSpinBox_6, 3, 3, 1, 1)
self.horizontalLayout_7 = QtWidgets.QHBoxLayout()
self.horizontalLayout_7.setObjectName("horizontalLayout_7")
self.label_34 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_34.setFont(font)
self.label_34.setObjectName("label_34")
self.horizontalLayout_7.addWidget(self.label_34)
self.lineEdit = QtWidgets.QLineEdit(self.scrollAreaWidgetContents)
self.lineEdit.setObjectName("lineEdit")
self.horizontalLayout_7.addWidget(self.lineEdit)
self.checkBox = QtWidgets.QCheckBox(self.scrollAreaWidgetContents)
self.checkBox.setObjectName("checkBox")
self.horizontalLayout_7.addWidget(self.checkBox)
self.gridLayout_3.addLayout(self.horizontalLayout_7, 3, 4, 1, 4)
self.horizontalLayout_6 = QtWidgets.QHBoxLayout()
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.label_35 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_35.setFont(font)
self.label_35.setObjectName("label_35")
self.horizontalLayout_6.addWidget(self.label_35)
self.doubleSpinBox_11 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_11.setPrefix("")
self.doubleSpinBox_11.setDecimals(1)
self.doubleSpinBox_11.setMaximum(1.0)
self.doubleSpinBox_11.setSingleStep(0.1)
self.doubleSpinBox_11.setProperty("value", 0.5)
self.doubleSpinBox_11.setObjectName("doubleSpinBox_11")
self.horizontalLayout_6.addWidget(self.doubleSpinBox_11)
self.label_36 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_36.setFont(font)
self.label_36.setObjectName("label_36")
self.horizontalLayout_6.addWidget(self.label_36)
self.doubleSpinBox_12 = QtWidgets.QDoubleSpinBox(self.scrollAreaWidgetContents)
self.doubleSpinBox_12.setPrefix("")
self.doubleSpinBox_12.setDecimals(1)
self.doubleSpinBox_12.setMaximum(1.0)
self.doubleSpinBox_12.setSingleStep(0.1)
self.doubleSpinBox_12.setProperty("value", 0.5)
self.doubleSpinBox_12.setObjectName("doubleSpinBox_12")
self.horizontalLayout_6.addWidget(self.doubleSpinBox_12)
self.label_37 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_37.setFont(font)
self.label_37.setObjectName("label_37")
self.horizontalLayout_6.addWidget(self.label_37)
self.spinBox = QtWidgets.QSpinBox(self.scrollAreaWidgetContents)
self.spinBox.setMinimum(-99999)
self.spinBox.setMaximum(99999)
self.spinBox.setProperty("value", -1)
self.spinBox.setObjectName("spinBox")
self.horizontalLayout_6.addWidget(self.spinBox)
self.gridLayout_3.addLayout(self.horizontalLayout_6, 4, 0, 1, 8)
self.horizontalLayout_8 = QtWidgets.QHBoxLayout()
self.horizontalLayout_8.setObjectName("horizontalLayout_8")
self.label_38 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_38.setFont(font)
self.label_38.setObjectName("label_38")
self.horizontalLayout_8.addWidget(self.label_38)
self.comboBox_2 = QtWidgets.QComboBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_2.sizePolicy().hasHeightForWidth())
self.comboBox_2.setSizePolicy(sizePolicy)
self.comboBox_2.setObjectName("comboBox_2")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.horizontalLayout_8.addWidget(self.comboBox_2)
self.label_39 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_39.setFont(font)
self.label_39.setObjectName("label_39")
self.horizontalLayout_8.addWidget(self.label_39)
self.comboBox_3 = QtWidgets.QComboBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.horizontalLayout_8.addWidget(self.comboBox_3)
self.label_40 = QtWidgets.QLabel(self.scrollAreaWidgetContents)
font = QtGui.QFont()
font.setPointSize(10)
self.label_40.setFont(font)
self.label_40.setObjectName("label_40")
self.horizontalLayout_8.addWidget(self.label_40)
self.comboBox_6 = QtWidgets.QComboBox(self.scrollAreaWidgetContents)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setObjectName("comboBox_6")
self.horizontalLayout_8.addWidget(self.comboBox_6)
self.gridLayout_3.addLayout(self.horizontalLayout_8, 5, 0, 1, 8)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.gridLayout_2.addWidget(self.scrollArea, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_2)
self.groupBox_3 = QtWidgets.QGroupBox(MACSE)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_4 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_4.addWidget(self.pushButton)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_4.addWidget(self.pushButton_2)
self.horizontalLayout_4.setStretch(0, 1)
self.horizontalLayout_4.setStretch(1, 1)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox = QtWidgets.QGroupBox(MACSE)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.groupBox.sizePolicy().hasHeightForWidth())
self.groupBox.setSizePolicy(sizePolicy)
self.groupBox.setObjectName("groupBox")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.progressBar = QtWidgets.QProgressBar(self.groupBox)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.verticalLayout_2.addWidget(self.progressBar)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_9.sizePolicy().hasHeightForWidth())
self.pushButton_9.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon2)
self.pushButton_9.setObjectName("pushButton_9")
self.verticalLayout_2.addWidget(self.pushButton_9)
self.verticalLayout.addWidget(self.groupBox)
self.retranslateUi(MACSE)
self.comboBox.setCurrentIndex(0)
self.comboBox_2.setCurrentIndex(0)
self.comboBox_3.setCurrentIndex(0)
self.comboBox_6.setCurrentIndex(-1)
self.checkBox_2.toggled['bool'].connect(self.comboBox_7.setEnabled)
self.checkBox_2.toggled['bool'].connect(self.pushButton_22.setEnabled)
QtCore.QMetaObject.connectSlotsByName(MACSE)
MACSE.setTabOrder(self.pushButton_3, self.comboBox_4)
MACSE.setTabOrder(self.comboBox_4, self.comboBox_9)
MACSE.setTabOrder(self.comboBox_9, self.pushButton_9)
def retranslateUi(self, MACSE):
_translate = QtCore.QCoreApplication.translate
MACSE.setWindowTitle(_translate("MACSE", "MACSE"))
self.groupBox_4.setTitle(_translate("MACSE", "Input"))
self.label_4.setToolTip(_translate("MACSE", "Sequence file (fasta) containing reliable nucleotide sequences"))
self.label_4.setText(_translate("MACSE", "Seq.:"))
self.comboBox_4.setToolTip(_translate("MACSE", "Sequence file (fasta) containing reliable nucleotide sequences"))
self.label_8.setToolTip(_translate("MACSE", "Sequence file (fasta) containing less reliable nucleotide sequences (e.g. pseudogenes). OPTIONAL!"))
self.label_8.setText(_translate("MACSE", "Seq_lr.:"))
self.comboBox_5.setToolTip(_translate("MACSE", "Sequence file (fasta) containing less reliable nucleotide sequences (e.g. pseudogenes)"))
self.checkBox_2.setToolTip(_translate("MACSE", "Improves previously computed alignments via “refineAlignment” subprogram."))
self.checkBox_2.setText(_translate("MACSE", "Refine:"))
self.comboBox_7.setToolTip(_translate("MACSE", "Improves previously computed alignments via “refineAlignment” subprogram."))
self.label_5.setText(_translate("MACSE", "<html><head/><body><p>If you choose "<span style=\" color:#ff0000;\">Refine</span>" (refineAlignment), "<span style=\" color:#ff0000;\">Seq.</span>" is optional. Click <a href=\"https://bioweb.supagro.inra.fr/macse/index.php?menu=intro\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about MACSE.</p></body></html>"))
self.label_7.setToolTip(_translate("MACSE", "Brief example"))
self.groupBox_2.setTitle(_translate("MACSE", "Parameter"))
self.label_22.setText(_translate("MACSE", "Code Table:"))
self.comboBox_9.setItemText(0, _translate("MACSE", "1 The standard code"))
self.comboBox_9.setItemText(1, _translate("MACSE", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(2, _translate("MACSE", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(3, _translate("MACSE", "4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"))
self.comboBox_9.setItemText(4, _translate("MACSE", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(5, _translate("MACSE", "6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(6, _translate("MACSE", "9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(7, _translate("MACSE", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(8, _translate("MACSE", "11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(9, _translate("MACSE", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(10, _translate("MACSE", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(11, _translate("MACSE", "14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(12, _translate("MACSE", "16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(13, _translate("MACSE", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(14, _translate("MACSE", "22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(15, _translate("MACSE", "23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(16, _translate("MACSE", "24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(17, _translate("MACSE", "25 Candidate Division SR1 and Gracilibacteria Code"))
self.comboBox_9.setItemText(18, _translate("MACSE", "26 Pachysolen tannophilus Nuclear Code"))
self.comboBox_9.setItemText(19, _translate("MACSE", "27 Karyorelict Nuclear"))
self.comboBox_9.setItemText(20, _translate("MACSE", "28 Condylostoma Nuclear"))
self.comboBox_9.setItemText(21, _translate("MACSE", "29 Mesodinium Nuclear"))
self.comboBox_9.setItemText(22, _translate("MACSE", "30 Peritrich Nuclear"))
self.comboBox_9.setItemText(23, _translate("MACSE", "31 Blastocrithidia Nuclear"))
self.label_33.setToolTip(_translate("MACSE", "Compressed amino acid alphabet used to compute initial pairwise distances or to identify homologous fragments."))
self.label_33.setText(_translate("MACSE", "Alphabet_AA:"))
self.comboBox.setToolTip(_translate("MACSE", "Compressed amino acid alphabet used to compute initial pairwise distances or to identify homologous fragments."))
self.comboBox.setItemText(0, _translate("MACSE", "SE_B_8"))
self.comboBox.setItemText(1, _translate("MACSE", "Dayhoff_6"))
self.comboBox.setItemText(2, _translate("MACSE", "Li_A_10"))
self.comboBox.setItemText(3, _translate("MACSE", "Li_B_10"))
self.comboBox.setItemText(4, _translate("MACSE", "Murphy_10"))
self.comboBox.setItemText(5, _translate("MACSE", "SE_B_10"))
self.comboBox.setItemText(6, _translate("MACSE", "SE_B_14"))
self.comboBox.setItemText(7, _translate("MACSE", "SE_B_6"))
self.comboBox.setItemText(8, _translate("MACSE", "SE_V_10"))
self.comboBox.setItemText(9, _translate("MACSE", "Solis_D_10"))
self.comboBox.setItemText(10, _translate("MACSE", "Solis_G_10"))
self.label_23.setToolTip(_translate("MACSE", "Cost of a frameshift in reliable sequences (those of \"seq.\" file)"))
self.label_23.setText(_translate("MACSE", "fs: "))
self.doubleSpinBox.setToolTip(_translate("MACSE", "Cost of a frameshift in reliable sequences (those of \"seq.\" file)"))
self.label_24.setToolTip(_translate("MACSE", "Cost of a frameshift in less reliable sequences (those of \"seq_lr\" file)"))
self.label_24.setText(_translate("MACSE", "fs_lr: "))
self.doubleSpinBox_2.setToolTip(_translate("MACSE", "Cost of a frameshift in less reliable sequences (those of \"seq_lr\" file)"))
self.label_26.setToolTip(_translate("MACSE", "Cost of a terminal frameshift (those in the first and last codon) in a reliable sequences (those of \"seq.\" file)"))
self.label_26.setText(_translate("MACSE", "fs_term: "))
self.doubleSpinBox_4.setToolTip(_translate("MACSE", "Cost of a terminal frameshift (those in the first and last codon) in a reliable sequences (those of \"seq.\" file)"))
self.label_25.setToolTip(_translate("MACSE", "Cost of a terminal frameshift (those in the first and last codon) in a less reliable sequences (those of \"seq_lr\" file)"))
self.label_25.setText(_translate("MACSE", "fs_lr_term: "))
self.doubleSpinBox_3.setToolTip(_translate("MACSE", "Cost of a terminal frameshift (those in the first and last codon) in a less reliable sequences (those of \"seq_lr\" file)"))
self.label_29.setToolTip(_translate("MACSE", "Cost of internal gap extension"))
self.label_29.setText(_translate("MACSE", "gap_ext:"))
self.doubleSpinBox_7.setToolTip(_translate("MACSE", "Cost of internal gap extension"))
self.label_31.setToolTip(_translate("MACSE", "Cost of internal gap opening"))
self.label_31.setText(_translate("MACSE", "gap_op:"))
self.doubleSpinBox_8.setToolTip(_translate("MACSE", "Cost of internal gap opening"))
self.label_30.setToolTip(_translate("MACSE", "Cost of terminal gap extension (e.g. those before the first nucleotide and after the last one)"))
self.label_30.setText(_translate("MACSE", "gap_ext_term:"))
self.doubleSpinBox_9.setToolTip(_translate("MACSE", "Cost of terminal gap extension (e.g. those before the first nucleotide and after the last one)"))
self.label_32.setToolTip(_translate("MACSE", "Cost of terminal gap opening (e.g. those before the first nucleotide and after the last one)"))
self.label_32.setText(_translate("MACSE", "gap_op_term:"))
self.doubleSpinBox_10.setToolTip(_translate("MACSE", "Cost of terminal gap opening (e.g. those before the first nucleotide and after the last one)"))
self.label_27.setToolTip(_translate("MACSE", "Cost of a stop codon in reliable sequences, it should be less than twice the cost of a frameshift in those sequences"))
self.label_27.setText(_translate("MACSE", "stop:"))
self.doubleSpinBox_5.setToolTip(_translate("MACSE", "Cost of a stop codon in reliable sequences, it should be less than twice the cost of a frameshift in those sequences"))
self.label_28.setToolTip(_translate("MACSE", "Cost of a stop codon in less reliable sequences, it should be less than twice the cost of a frameshift in those sequences"))
self.label_28.setText(_translate("MACSE", "stop_lr:"))
self.doubleSpinBox_6.setToolTip(_translate("MACSE", "Cost of a stop codon in less reliable sequences, it should be less than twice the cost of a frameshift in those sequences"))
self.label_34.setToolTip(_translate("MACSE", "Extra nucleotide characters to consider as N"))
self.label_34.setText(_translate("MACSE", "allow_NT:"))
self.lineEdit.setToolTip(_translate("MACSE", "Extra nucleotide characters to consider as N"))
self.lineEdit.setPlaceholderText(_translate("MACSE", "#?"))
self.checkBox.setToolTip(_translate("MACSE", "Disables ambiguities management (e.g. a \'TCN\' codon will be translated into an unknown amono acid instead of a serine (S))"))
self.checkBox.setText(_translate("MACSE", "ambi_OFF"))
self.label_35.setToolTip(_translate("MACSE", "If smaller than 1 each refinement loop will be faster than the previous one by focusing on a smaller interval alignment improvement steps (the lower this value the faster the refinements, possitive values [0-1])"))
self.label_35.setText(_translate("MACSE", "local_realign_dec:"))
self.doubleSpinBox_11.setToolTip(_translate("MACSE", "If smaller than 1 each refinement loop will be faster than the previous one by focusing on a smaller interval alignment improvement steps (the lower this value the faster the refinements, possitive values [0-1])"))
self.label_36.setToolTip(_translate("MACSE", "If smaller than 1 the first refinement loop will consider only local improvement (the lower this value the faster the initial refinement, possible values [0-1])"))
self.label_36.setText(_translate("MACSE", "local_realign_init:"))
self.doubleSpinBox_12.setToolTip(_translate("MACSE", "If smaller than 1 the first refinement loop will consider only local improvement (the lower this value the faster the initial refinement, possible values [0-1])"))
self.label_37.setToolTip(_translate("MACSE", "The max number of refinement iterations when optimizing alignment (-1 = no iteration limit)"))
self.label_37.setText(_translate("MACSE", "max_refine_iter:"))
self.spinBox.setToolTip(_translate("MACSE", "The max number of refinement iterations when optimizing alignment (-1 = no iteration limit)"))
self.label_38.setToolTip(_translate("MACSE", "Optimization parameter (0=none, 1=basic leaf cut, 2=standard branch cut)"))
self.label_38.setText(_translate("MACSE", "optimization:"))
self.comboBox_2.setToolTip(_translate("MACSE", "Optimization parameter (0=none, 1=basic leaf cut, 2=standard branch cut)"))
self.comboBox_2.setItemText(0, _translate("MACSE", "STANDARD"))
self.comboBox_2.setItemText(1, _translate("MACSE", "NONE"))
self.comboBox_2.setItemText(2, _translate("MACSE", "BASIC"))
self.label_39.setToolTip(_translate("MACSE", "Amino acid score matrix to use"))
self.label_39.setText(_translate("MACSE", "score matrix:"))
self.comboBox_3.setToolTip(_translate("MACSE", "Amino acid score matrix to use"))
self.comboBox_3.setItemText(0, _translate("MACSE", "BLOSUM62"))
self.comboBox_3.setItemText(1, _translate("MACSE", "VTML200_BIS"))
self.comboBox_3.setItemText(2, _translate("MACSE", "VTML240"))
self.label_40.setToolTip(_translate("MACSE", "Amino acid score matrix to use"))
self.label_40.setText(_translate("MACSE", "thread:"))
self.comboBox_6.setToolTip(_translate("MACSE", "Amino acid score matrix to use"))
self.groupBox_3.setTitle(_translate("MACSE", "Run"))
self.pushButton.setText(_translate("MACSE", "Start"))
self.pushButton_2.setText(_translate("MACSE", "Stop"))
self.groupBox.setTitle(_translate("MACSE", "Progress"))
self.pushButton_9.setText(_translate("MACSE", "Show log"))
class Ui_compareTable(object):
def setupUi(self, compareTable):
compareTable.setObjectName("compareTable")
compareTable.resize(444, 416)
compareTable.setSizeGripEnabled(True)
self.gridLayout_3 = QtWidgets.QGridLayout(compareTable)
self.gridLayout_3.setObjectName("gridLayout_3")
self.groupBox_4 = QtWidgets.QGroupBox(compareTable)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.verticalLayout = QtWidgets.QVBoxLayout()
self.verticalLayout.setObjectName("verticalLayout")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.verticalLayout.addWidget(self.label_4)
spacerItem = QtWidgets.QSpacerItem(20, 40,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
self.verticalLayout.addItem(spacerItem)
self.gridLayout_2.addLayout(self.verticalLayout, 0, 0, 1, 1)
self.listWidget = QtWidgets.QListWidget(self.groupBox_4)
self.listWidget.setAcceptDrops(True)
self.listWidget.setTabKeyNavigation(True)
self.listWidget.setDragEnabled(True)
self.listWidget.setDragDropOverwriteMode(False)
self.listWidget.setDragDropMode(
QtWidgets.QAbstractItemView.InternalMove)
self.listWidget.setDefaultDropAction(QtCore.Qt.MoveAction)
self.listWidget.setAlternatingRowColors(True)
self.listWidget.setSelectionMode(
QtWidgets.QAbstractItemView.ExtendedSelection)
self.listWidget.setSelectionRectVisible(False)
self.listWidget.setObjectName("listWidget")
self.gridLayout_2.addWidget(self.listWidget, 0, 1, 1, 1)
self.verticalLayout_2 = QtWidgets.QVBoxLayout()
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.verticalLayout_2.addWidget(self.pushButton_3)
self.toolButton_T = QtWidgets.QToolButton(self.groupBox_4)
self.toolButton_T.setMinimumSize(QtCore.QSize(30, 30))
self.toolButton_T.setMaximumSize(QtCore.QSize(30, 30))
self.toolButton_T.setText("")
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_T.setIcon(icon)
self.toolButton_T.setIconSize(QtCore.QSize(26, 26))
self.toolButton_T.setAutoRaise(True)
self.toolButton_T.setObjectName("toolButton_T")
self.verticalLayout_2.addWidget(self.toolButton_T)
spacerItem1 = QtWidgets.QSpacerItem(20, 40,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
self.verticalLayout_2.addItem(spacerItem1)
self.gridLayout_2.addLayout(self.verticalLayout_2, 0, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem2 = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem2)
self.label_2 = ClickedLableGif(self.groupBox_4)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.gridLayout_2.addLayout(self.horizontalLayout, 1, 0, 1, 3)
self.gridLayout_3.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(compareTable)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.spinBox = QtWidgets.QSpinBox(self.groupBox)
self.spinBox.setProperty("value", 2)
self.spinBox.setObjectName("spinBox")
self.gridLayout.addWidget(self.spinBox, 2, 1, 1, 1)
self.label = QtWidgets.QLabel(self.groupBox)
self.label.setObjectName("label")
self.gridLayout.addWidget(self.label, 2, 0, 1, 1)
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setObjectName("checkBox")
self.gridLayout.addWidget(self.checkBox, 1, 0, 1, 2)
self.gridLayout_3.addWidget(self.groupBox, 1, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(compareTable)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_5.setObjectName("gridLayout_5")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.gridLayout_5.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_5.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_5.setColumnStretch(0, 1)
self.gridLayout_5.setColumnStretch(1, 1)
self.gridLayout_3.addWidget(self.groupBox_3, 2, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(compareTable)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_4.setObjectName("gridLayout_4")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_2)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_4.addWidget(self.progressBar, 0, 0, 1, 1)
self.gridLayout_3.addWidget(self.groupBox_2, 3, 0, 1, 1)
self.retranslateUi(compareTable)
QtCore.QMetaObject.connectSlotsByName(compareTable)
def retranslateUi(self, compareTable):
_translate = QtCore.QCoreApplication.translate
compareTable.setWindowTitle(_translate("compareTable",
"Compare table"))
self.groupBox_4.setTitle(_translate("compareTable", "Input"))
self.label_4.setText(_translate("compareTable", "Tables:"))
self.listWidget.setToolTip(
_translate("compareTable", "try to drag to reorder"))
self.toolButton_T.setShortcut(_translate("compareTable", "Del"))
self.label_14.setText(
_translate(
"compareTable",
"<html><head/><body><p>Try to drag <span style=\" font-weight:600; color:#ff0105;\">two or more</span> tables (<span style=\" font-weight:600; color:#ff0026;\">.csv</span>) and drop here</p></body></html>"
))
self.label_2.setToolTip(_translate("compareTable", "Brief example"))
self.groupBox.setTitle(_translate("compareTable", "Parameters"))
self.label.setText(
_translate("compareTable",
"Number of header rows (skip comparison):"))
self.checkBox.setText(
_translate(
"compareTable",
"Calculate pairwise similarity (for organization table only)"))
self.groupBox_3.setTitle(_translate("compareTable", "Run"))
self.pushButton.setText(_translate("compareTable", "Start"))
self.pushButton_2.setText(_translate("compareTable", "Cancel"))
self.groupBox_2.setTitle(_translate("compareTable", "Progress"))
class Ui_mafft(object):
def setupUi(self, mafft):
mafft.setObjectName("mafft")
mafft.resize(622, 492)
mafft.setStyleSheet("")
mafft.setSizeGripEnabled(True)
self.gridLayout_5 = QtWidgets.QGridLayout(mafft)
self.gridLayout_5.setObjectName("gridLayout_5")
self.groupBox_4 = QtWidgets.QGroupBox(mafft)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_4.setObjectName("gridLayout_4")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout_4.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout_4.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_4.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.horizontalLayout_3.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_3.addItem(spacerItem)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.horizontalLayout_3.addWidget(self.label_8)
self.label_7 = ClickedLableGif(self.groupBox_4)
self.label_7.setText("")
self.label_7.setObjectName("label_7")
self.horizontalLayout_3.addWidget(self.label_7)
self.gridLayout_4.addLayout(self.horizontalLayout_3, 1, 0, 1, 3)
self.gridLayout_5.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(mafft)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_2.setHorizontalSpacing(0)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label = QtWidgets.QLabel(self.groupBox_2)
self.label.setObjectName("label")
self.gridLayout_2.addWidget(self.label, 0, 0, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.normal_radioButton = QtWidgets.QRadioButton(self.groupBox_2)
self.normal_radioButton.setEnabled(False)
self.normal_radioButton.setChecked(False)
self.normal_radioButton.setObjectName("normal_radioButton")
self.buttonGroup_2 = QtWidgets.QButtonGroup(mafft)
self.buttonGroup_2.setObjectName("buttonGroup_2")
self.buttonGroup_2.addButton(self.normal_radioButton)
self.horizontalLayout.addWidget(self.normal_radioButton)
self.codon_radioButton = QtWidgets.QRadioButton(self.groupBox_2)
self.codon_radioButton.setChecked(True)
self.codon_radioButton.setObjectName("codon_radioButton")
self.buttonGroup_2.addButton(self.codon_radioButton)
self.horizontalLayout.addWidget(self.codon_radioButton)
self.N2P_radioButton = QtWidgets.QRadioButton(self.groupBox_2)
self.N2P_radioButton.setObjectName("N2P_radioButton")
self.buttonGroup_2.addButton(self.N2P_radioButton)
self.horizontalLayout.addWidget(self.N2P_radioButton)
self.gridLayout_2.addLayout(self.horizontalLayout, 0, 2, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_2.setChecked(True)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout_2.addWidget(self.checkBox_2, 1, 0, 1, 2)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.AA_radioButton_2 = QtWidgets.QRadioButton(self.groupBox_2)
self.AA_radioButton_2.setChecked(False)
self.AA_radioButton_2.setObjectName("AA_radioButton_2")
self.buttonGroup = QtWidgets.QButtonGroup(mafft)
self.buttonGroup.setObjectName("buttonGroup")
self.buttonGroup.addButton(self.AA_radioButton_2)
self.horizontalLayout_2.addWidget(self.AA_radioButton_2)
self.PCG_radioButton_2 = QtWidgets.QRadioButton(self.groupBox_2)
self.PCG_radioButton_2.setChecked(True)
self.PCG_radioButton_2.setObjectName("PCG_radioButton_2")
self.buttonGroup.addButton(self.PCG_radioButton_2)
self.horizontalLayout_2.addWidget(self.PCG_radioButton_2)
self.RNAs_radioButton_2 = QtWidgets.QRadioButton(self.groupBox_2)
self.RNAs_radioButton_2.setObjectName("RNAs_radioButton_2")
self.buttonGroup.addButton(self.RNAs_radioButton_2)
self.horizontalLayout_2.addWidget(self.RNAs_radioButton_2)
self.gridLayout_2.addLayout(self.horizontalLayout_2, 1, 2, 1, 1)
self.label_22 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.gridLayout_2.addWidget(self.label_22, 2, 0, 1, 1)
self.label_24 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_2.addWidget(self.label_24, 3, 0, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_2.addWidget(self.comboBox_3, 3, 2, 1, 1)
self.label_23 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_23.setFont(font)
self.label_23.setObjectName("label_23")
self.gridLayout_2.addWidget(self.label_23, 4, 0, 1, 1)
self.comboBox_2 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_2.sizePolicy().hasHeightForWidth())
self.comboBox_2.setSizePolicy(sizePolicy)
self.comboBox_2.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_2.setObjectName("comboBox_2")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.gridLayout_2.addWidget(self.comboBox_2, 4, 2, 1, 1)
self.label_25 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout_2.addWidget(self.label_25, 5, 0, 1, 1)
self.pushButton_par = QtWidgets.QPushButton(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_par.sizePolicy().hasHeightForWidth())
self.pushButton_par.setSizePolicy(sizePolicy)
self.pushButton_par.setMinimumSize(QtCore.QSize(0, 26))
self.pushButton_par.setLayoutDirection(QtCore.Qt.LeftToRight)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/keynote.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_par.setIcon(icon)
self.pushButton_par.setObjectName("pushButton_par")
self.gridLayout_2.addWidget(self.pushButton_par, 5, 2, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_2.addWidget(self.comboBox_9, 2, 2, 1, 1)
self.gridLayout_5.addWidget(self.groupBox_2, 1, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(mafft)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.gridLayout_5.addWidget(self.groupBox_3, 2, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(mafft)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.label_3 = QtWidgets.QLabel(self.groupBox)
self.label_3.setObjectName("label_3")
self.gridLayout.addWidget(self.label_3, 0, 0, 1, 1)
self.progressBar_2 = QtWidgets.QProgressBar(self.groupBox)
self.progressBar_2.setProperty("value", 0)
self.progressBar_2.setObjectName("progressBar_2")
self.gridLayout.addWidget(self.progressBar_2, 0, 1, 1, 1)
self.label_2 = QtWidgets.QLabel(self.groupBox)
self.label_2.setObjectName("label_2")
self.gridLayout.addWidget(self.label_2, 1, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout.addWidget(self.progressBar, 1, 1, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox)
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 2, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_9.sizePolicy().hasHeightForWidth())
self.pushButton_9.setSizePolicy(sizePolicy)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout.addWidget(self.pushButton_9, 2, 1, 1, 1)
self.gridLayout_5.addWidget(self.groupBox, 3, 0, 1, 1)
self.label.setBuddy(self.normal_radioButton)
self.label_24.setBuddy(self.comboBox_3)
self.label_23.setBuddy(self.comboBox_2)
self.label_25.setBuddy(self.comboBox_2)
self.retranslateUi(mafft)
self.AA_radioButton_2.toggled['bool'].connect(self.normal_radioButton.setEnabled)
self.RNAs_radioButton_2.toggled['bool'].connect(self.normal_radioButton.setEnabled)
self.AA_radioButton_2.toggled['bool'].connect(self.codon_radioButton.setDisabled)
self.AA_radioButton_2.toggled['bool'].connect(self.N2P_radioButton.setDisabled)
self.RNAs_radioButton_2.toggled['bool'].connect(self.N2P_radioButton.setDisabled)
self.RNAs_radioButton_2.toggled['bool'].connect(self.codon_radioButton.setDisabled)
self.PCG_radioButton_2.toggled['bool'].connect(self.normal_radioButton.setDisabled)
self.PCG_radioButton_2.toggled['bool'].connect(self.codon_radioButton.setEnabled)
self.PCG_radioButton_2.toggled['bool'].connect(self.N2P_radioButton.setEnabled)
self.PCG_radioButton_2.toggled['bool'].connect(self.codon_radioButton.toggle)
self.RNAs_radioButton_2.toggled['bool'].connect(self.normal_radioButton.toggle)
self.AA_radioButton_2.toggled['bool'].connect(self.normal_radioButton.toggle)
self.checkBox_2.toggled['bool'].connect(self.AA_radioButton_2.setEnabled)
self.checkBox_2.toggled['bool'].connect(self.PCG_radioButton_2.setEnabled)
self.checkBox_2.toggled['bool'].connect(self.RNAs_radioButton_2.setEnabled)
self.normal_radioButton.toggled['bool'].connect(self.comboBox_9.setDisabled)
self.N2P_radioButton.toggled['bool'].connect(self.comboBox_9.setDisabled)
self.codon_radioButton.toggled['bool'].connect(self.comboBox_9.setEnabled)
self.N2P_radioButton.toggled['bool'].connect(self.comboBox_9.setEnabled)
QtCore.QMetaObject.connectSlotsByName(mafft)
mafft.setTabOrder(self.pushButton_3, self.checkBox_2)
mafft.setTabOrder(self.checkBox_2, self.comboBox_3)
mafft.setTabOrder(self.comboBox_3, self.comboBox_4)
mafft.setTabOrder(self.comboBox_4, self.comboBox_2)
mafft.setTabOrder(self.comboBox_2, self.pushButton_par)
mafft.setTabOrder(self.pushButton_par, self.comboBox_9)
mafft.setTabOrder(self.comboBox_9, self.pushButton)
mafft.setTabOrder(self.pushButton, self.pushButton_2)
mafft.setTabOrder(self.pushButton_2, self.pushButton_9)
mafft.setTabOrder(self.pushButton_9, self.normal_radioButton)
mafft.setTabOrder(self.normal_radioButton, self.codon_radioButton)
mafft.setTabOrder(self.codon_radioButton, self.N2P_radioButton)
mafft.setTabOrder(self.N2P_radioButton, self.AA_radioButton_2)
mafft.setTabOrder(self.AA_radioButton_2, self.PCG_radioButton_2)
mafft.setTabOrder(self.PCG_radioButton_2, self.RNAs_radioButton_2)
def retranslateUi(self, mafft):
_translate = QtCore.QCoreApplication.translate
mafft.setWindowTitle(_translate("mafft", "MAFFT"))
self.groupBox_4.setTitle(_translate("mafft", "Input"))
self.label_4.setText(_translate("mafft", "Input:"))
self.label_5.setText(_translate("mafft", "<html><head/><body><p>Try to drag your <span style=\" font-weight:600; color:#ff0000;\">fasta</span> file and drop here if you want to use custom files</p></body></html>"))
self.label_8.setText(_translate("mafft", "Demo:"))
self.label_7.setToolTip(_translate("mafft", "Brief example"))
self.groupBox_2.setTitle(_translate("mafft", "Parameter"))
self.label.setText(_translate("mafft", "Alignment Mode:"))
self.normal_radioButton.setText(_translate("mafft", "Normal"))
self.codon_radioButton.setText(_translate("mafft", "Codon"))
self.N2P_radioButton.setText(_translate("mafft", "N2P"))
self.checkBox_2.setText(_translate("mafft", "Extract-Seq.:"))
self.AA_radioButton_2.setToolTip(_translate("mafft", "Amino acid sequences"))
self.AA_radioButton_2.setText(_translate("mafft", "AA"))
self.PCG_radioButton_2.setToolTip(_translate("mafft", "Protein-coding genes"))
self.PCG_radioButton_2.setText(_translate("mafft", "PCGs"))
self.RNAs_radioButton_2.setToolTip(_translate("mafft", "RNA sequences (rRNA and tRNA)"))
self.RNAs_radioButton_2.setText(_translate("mafft", "RNAs"))
self.label_22.setText(_translate("mafft", "Code Table:"))
self.label_24.setText(_translate("mafft", "Strategy:"))
self.comboBox_3.setItemText(0, _translate("mafft", "1. --auto"))
self.comboBox_3.setItemText(1, _translate("mafft", "2. FFT-NS-1 (fast)"))
self.comboBox_3.setItemText(2, _translate("mafft", "3. FFT-NS-2 (default)"))
self.comboBox_3.setItemText(3, _translate("mafft", "4. G-INS-i (accurate)"))
self.comboBox_3.setItemText(4, _translate("mafft", "5. L-INS-i (accurate)"))
self.comboBox_3.setItemText(5, _translate("mafft", "6. E-INS-i (accurate)"))
self.label_23.setText(_translate("mafft", "Export Format:"))
self.comboBox_2.setItemText(0, _translate("mafft", "1. CLUSTAL Format / Sorted"))
self.comboBox_2.setItemText(1, _translate("mafft", "2. CLUSTAL Format / Input order"))
self.comboBox_2.setItemText(2, _translate("mafft", "3. FASTA Format / Sorted"))
self.comboBox_2.setItemText(3, _translate("mafft", "4. FASTA Format / Input order"))
self.comboBox_2.setItemText(4, _translate("mafft", "5. PHYLIP Format / Sorted"))
self.comboBox_2.setItemText(5, _translate("mafft", "6. PHYLIP Format / Input order"))
self.label_25.setText(_translate("mafft", "Parameters:"))
self.pushButton_par.setText(_translate("mafft", "Additional Parameters"))
self.comboBox_9.setItemText(0, _translate("mafft", "1 The standard code"))
self.comboBox_9.setItemText(1, _translate("mafft", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(2, _translate("mafft", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(3, _translate("mafft", "4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"))
self.comboBox_9.setItemText(4, _translate("mafft", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(5, _translate("mafft", "6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(6, _translate("mafft", "9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(7, _translate("mafft", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(8, _translate("mafft", "11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(9, _translate("mafft", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(10, _translate("mafft", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(11, _translate("mafft", "14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(12, _translate("mafft", "16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(13, _translate("mafft", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(14, _translate("mafft", "22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(15, _translate("mafft", "23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(16, _translate("mafft", "24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(17, _translate("mafft", "25 Candidate Division SR1 and Gracilibacteria Code"))
self.comboBox_9.setItemText(18, _translate("mafft", "26 Pachysolen tannophilus Nuclear Code"))
self.comboBox_9.setItemText(19, _translate("mafft", "27 Karyorelict Nuclear"))
self.comboBox_9.setItemText(20, _translate("mafft", "28 Condylostoma Nuclear"))
self.comboBox_9.setItemText(21, _translate("mafft", "29 Mesodinium Nuclear"))
self.comboBox_9.setItemText(22, _translate("mafft", "30 Peritrich Nuclear"))
self.comboBox_9.setItemText(23, _translate("mafft", "31 Blastocrithidia Nuclear"))
self.groupBox_3.setTitle(_translate("mafft", "Run"))
self.pushButton.setText(_translate("mafft", "Start"))
self.pushButton_2.setText(_translate("mafft", "Stop"))
self.groupBox.setTitle(_translate("mafft", "Progress"))
self.label_3.setText(_translate("mafft", "file:"))
self.label_2.setText(_translate("mafft", "Total:"))
self.label_6.setText(_translate("mafft", "Log:"))
self.pushButton_9.setText(_translate("mafft", "Show log"))
class Ui_ExePath(object):
def setupUi(self, ExePath):
ExePath.setObjectName("ExePath")
ExePath.resize(410, 268)
ExePath.setMinimumSize(QtCore.QSize(410, 0))
ExePath.setMaximumSize(QtCore.QSize(410, 16777215))
self.verticalLayout_2 = QtWidgets.QVBoxLayout(ExePath)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.groupBox_2 = QtWidgets.QGroupBox(ExePath)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_2.setHorizontalSpacing(2)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_3 = QtWidgets.QLabel(self.groupBox_2)
self.label_3.setWordWrap(True)
self.label_3.setObjectName("label_3")
self.gridLayout_2.addWidget(self.label_3, 0, 0, 1, 3)
self.label = QtWidgets.QLabel(self.groupBox_2)
self.label.setObjectName("label")
self.gridLayout_2.addWidget(self.label, 1, 0, 1, 1)
self.lineEdit = QtWidgets.QLineEdit(self.groupBox_2)
self.lineEdit.setDragEnabled(True)
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout_2.addWidget(self.lineEdit, 1, 1, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.pushButton = QtWidgets.QPushButton(self.groupBox_2)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_ok.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout.addWidget(self.pushButton)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_2)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_close.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout.addWidget(self.pushButton_2)
self.gridLayout_2.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.toolButton_3 = QtWidgets.QToolButton(self.groupBox_2)
self.toolButton_3.setStyleSheet("")
self.toolButton_3.setText("")
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(
":/picture/resourses/Open_folder_add_512px_1186192_easyicon.net.png"
), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_3.setIcon(icon2)
self.toolButton_3.setIconSize(QtCore.QSize(30, 30))
self.toolButton_3.setCheckable(False)
self.toolButton_3.setChecked(False)
self.toolButton_3.setAutoRaise(True)
self.toolButton_3.setObjectName("toolButton_3")
self.gridLayout_2.addWidget(self.toolButton_3, 1, 2, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_2)
self.groupBox = QtWidgets.QGroupBox(ExePath)
self.groupBox.setObjectName("groupBox")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox)
self.verticalLayout.setObjectName("verticalLayout")
self.label_2 = QtWidgets.QLabel(self.groupBox)
self.label_2.setWordWrap(True)
self.label_2.setObjectName("label_2")
self.verticalLayout.addWidget(self.label_2)
self.pushButton_5 = QtWidgets.QPushButton(self.groupBox)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/Install.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_5.setIcon(icon3)
self.pushButton_5.setObjectName("pushButton_5")
self.verticalLayout.addWidget(self.pushButton_5)
self.label_4 = QtWidgets.QLabel(self.groupBox)
self.label_4.setOpenExternalLinks(False)
self.label_4.setTextInteractionFlags(QtCore.Qt.LinksAccessibleByMouse
| QtCore.Qt.TextSelectableByMouse)
self.label_4.setObjectName("label_4")
self.verticalLayout.addWidget(self.label_4)
self.verticalLayout_2.addWidget(self.groupBox)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_5 = QtWidgets.QLabel(ExePath)
self.label_5.setObjectName("label_5")
self.horizontalLayout_2.addWidget(self.label_5)
self.label_6 = ClickedLableGif(ExePath)
self.label_6.setText("")
self.label_6.setObjectName("label_6")
self.horizontalLayout_2.addWidget(self.label_6)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem)
self.verticalLayout_2.addLayout(self.horizontalLayout_2)
self.retranslateUi(ExePath)
QtCore.QMetaObject.connectSlotsByName(ExePath)
ExePath.setTabOrder(self.pushButton, self.toolButton_3)
ExePath.setTabOrder(self.toolButton_3, self.pushButton_5)
ExePath.setTabOrder(self.pushButton_5, self.lineEdit)
ExePath.setTabOrder(self.lineEdit, self.pushButton_2)
def retranslateUi(self, ExePath):
_translate = QtCore.QCoreApplication.translate
ExePath.setWindowTitle(_translate("ExePath", "Specify excutable path"))
self.groupBox_2.setTitle(_translate("ExePath", "Specify"))
self.label_3.setText(
_translate(
"ExePath",
"<html><head/><body><p>If you have Rscript, please <span style=\" font-weight:600; color:#ff0000;\">specify</span>.</p></body></html>"
))
self.label.setText(_translate("ExePath", "Rscript Path:"))
self.lineEdit.setPlaceholderText(
_translate("ExePath", "C:\\R-3.4.4\\bin\\Rscript.exe"))
self.pushButton.setText(_translate("ExePath", "Ok"))
self.pushButton_2.setText(_translate("ExePath", "Cancel"))
self.groupBox.setTitle(_translate("ExePath", "Download"))
self.label_2.setText(
_translate(
"ExePath",
"<html><head/><body><p>If you don\'t have Rscript, please <span style=\" font-weight:600; color:#ff0000;\">download</span>.</p></body></html>"
))
self.pushButton_5.setText(_translate("ExePath", "Download"))
self.label_4.setText(
_translate(
"ExePath",
"<html><head/><body><p><a href=\"https://cran.r-project.org/src/base/R-3/\"><span style=\" text-decoration: underline; color:#0000ff;\">https://cran.r-project.org/src/base/R-3/</span></a></p></body></html>"
))
self.label_5.setText(
_translate("ExePath", "Don\'t know how to configure? Please see"))
self.label_6.setToolTip(_translate("ExePath", "Brief example"))
class Ui_Settings(object):
def setupUi(self, Settings):
Settings.setObjectName("Settings")
Settings.setWindowModality(QtCore.Qt.NonModal)
Settings.resize(874, 496)
Settings.setContextMenuPolicy(QtCore.Qt.DefaultContextMenu)
self.gridLayout_3 = QtWidgets.QGridLayout(Settings)
self.gridLayout_3.setObjectName("gridLayout_3")
self.splitter = QtWidgets.QSplitter(Settings)
self.splitter.setOrientation(QtCore.Qt.Horizontal)
self.splitter.setObjectName("splitter")
self.listWidget = QtWidgets.QListWidget(self.splitter)
self.listWidget.setObjectName("listWidget")
self.stackedWidget = QtWidgets.QStackedWidget(self.splitter)
self.stackedWidget.setStyleSheet("QStackedWidget {background-color: white}")
self.stackedWidget.setObjectName("stackedWidget")
self.page_2 = QtWidgets.QWidget()
self.page_2.setObjectName("page_2")
self.gridLayout_5 = QtWidgets.QGridLayout(self.page_2)
self.gridLayout_5.setContentsMargins(0, 0, 0, 0)
self.gridLayout_5.setObjectName("gridLayout_5")
self.tableWidget = QtWidgets.QTableWidget(self.page_2)
self.tableWidget.setStyleSheet("background-color: rgb(255, 255, 255);")
self.tableWidget.setEditTriggers(QtWidgets.QAbstractItemView.NoEditTriggers)
self.tableWidget.setObjectName("tableWidget")
self.tableWidget.setColumnCount(4)
self.tableWidget.setRowCount(14)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(3, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(4, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(5, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(6, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(7, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(8, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(9, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(10, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(11, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(12, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setVerticalHeaderItem(13, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setHorizontalHeaderItem(3, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(0, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(1, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(1, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(1, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(2, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(2, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(2, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(3, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(3, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(3, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(4, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(4, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(4, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(5, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(5, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(5, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(6, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(6, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(6, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(7, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(7, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(7, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(8, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(8, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(8, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(9, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(9, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(9, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(10, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(10, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(10, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(11, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(11, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(11, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(12, 0, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(12, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(12, 2, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(13, 1, item)
item = QtWidgets.QTableWidgetItem()
self.tableWidget.setItem(13, 2, item)
self.tableWidget.horizontalHeader().setStretchLastSection(False)
self.gridLayout_5.addWidget(self.tableWidget, 0, 0, 1, 1)
self.stackedWidget.addWidget(self.page_2)
self.page_3 = QtWidgets.QWidget()
self.page_3.setObjectName("page_3")
self.gridLayout_4 = QtWidgets.QGridLayout(self.page_3)
self.gridLayout_4.setContentsMargins(0, 0, 0, 0)
self.gridLayout_4.setSpacing(0)
self.gridLayout_4.setObjectName("gridLayout_4")
self.widget_container_2 = QtWidgets.QWidget(self.page_3)
self.widget_container_2.setStyleSheet("QWidget#widget_container_2 {border: 1px ridge gray; background-color: white}")
self.widget_container_2.setObjectName("widget_container_2")
self.gridLayout_6 = QtWidgets.QGridLayout(self.widget_container_2)
self.gridLayout_6.setContentsMargins(5, 3, 5, 3)
self.gridLayout_6.setObjectName("gridLayout_6")
self.tableView_2 = QtWidgets.QTableView(self.widget_container_2)
self.tableView_2.setAcceptDrops(True)
self.tableView_2.setDragEnabled(True)
self.tableView_2.setDragDropOverwriteMode(True)
self.tableView_2.setDragDropMode(QtWidgets.QAbstractItemView.InternalMove)
self.tableView_2.setDefaultDropAction(QtCore.Qt.TargetMoveAction)
self.tableView_2.setSelectionMode(QtWidgets.QAbstractItemView.ExtendedSelection)
self.tableView_2.setObjectName("tableView_2")
self.tableView_2.horizontalHeader().setSortIndicatorShown(True)
self.tableView_2.horizontalHeader().setStretchLastSection(False)
self.gridLayout_6.addWidget(self.tableView_2, 0, 0, 1, 1)
self.gridLayout_2 = QtWidgets.QGridLayout()
self.gridLayout_2.setObjectName("gridLayout_2")
self.pushButton_6 = QtWidgets.QPushButton(self.widget_container_2)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/table_row_add_after.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_6.setIcon(icon)
self.pushButton_6.setObjectName("pushButton_6")
self.gridLayout_2.addWidget(self.pushButton_6, 0, 0, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setSpacing(2)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.pushButton_7 = QtWidgets.QPushButton(self.widget_container_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_7.sizePolicy().hasHeightForWidth())
self.pushButton_7.setSizePolicy(sizePolicy)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/table_column_add_after.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_7.setIcon(icon1)
self.pushButton_7.setObjectName("pushButton_7")
self.horizontalLayout_2.addWidget(self.pushButton_7)
self.label_6 = ClickedLableGif(self.widget_container_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.label_6.sizePolicy().hasHeightForWidth())
self.label_6.setSizePolicy(sizePolicy)
self.label_6.setText("")
self.label_6.setObjectName("label_6")
self.horizontalLayout_2.addWidget(self.label_6)
self.gridLayout_2.addLayout(self.horizontalLayout_2, 0, 1, 1, 1)
self.pushButton_8 = QtWidgets.QPushButton(self.widget_container_2)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_8.setIcon(icon2)
self.pushButton_8.setObjectName("pushButton_8")
self.gridLayout_2.addWidget(self.pushButton_8, 1, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.widget_container_2)
self.pushButton_9.setIcon(icon2)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_2.addWidget(self.pushButton_9, 1, 1, 1, 1)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.comboBox = QtWidgets.QComboBox(self.widget_container_2)
self.comboBox.setObjectName("comboBox")
self.horizontalLayout_3.addWidget(self.comboBox)
self.toolButton_3 = QtWidgets.QToolButton(self.widget_container_2)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/add-icon.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_3.setIcon(icon3)
self.toolButton_3.setAutoRaise(True)
self.toolButton_3.setObjectName("toolButton_3")
self.horizontalLayout_3.addWidget(self.toolButton_3)
self.toolButton_4 = QtWidgets.QToolButton(self.widget_container_2)
self.toolButton_4.setIcon(icon2)
self.toolButton_4.setAutoRaise(True)
self.toolButton_4.setObjectName("toolButton_4")
self.horizontalLayout_3.addWidget(self.toolButton_4)
self.line = QtWidgets.QFrame(self.widget_container_2)
self.line.setFrameShape(QtWidgets.QFrame.VLine)
self.line.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line.setObjectName("line")
self.horizontalLayout_3.addWidget(self.line)
self.toolButton_6 = QtWidgets.QToolButton(self.widget_container_2)
icon4 = QtGui.QIcon()
icon4.addPixmap(QtGui.QPixmap(":/picture/resourses/import.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_6.setIcon(icon4)
self.toolButton_6.setAutoRaise(True)
self.toolButton_6.setObjectName("toolButton_6")
self.horizontalLayout_3.addWidget(self.toolButton_6)
self.toolButton_5 = QtWidgets.QToolButton(self.widget_container_2)
icon5 = QtGui.QIcon()
icon5.addPixmap(QtGui.QPixmap(":/picture/resourses/up.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_5.setIcon(icon5)
self.toolButton_5.setAutoRaise(True)
self.toolButton_5.setObjectName("toolButton_5")
self.horizontalLayout_3.addWidget(self.toolButton_5)
self.gridLayout_2.addLayout(self.horizontalLayout_3, 2, 0, 1, 2)
self.gridLayout_2.setColumnStretch(0, 1)
self.gridLayout_2.setColumnStretch(1, 1)
self.gridLayout_6.addLayout(self.gridLayout_2, 1, 0, 1, 1)
self.gridLayout_4.addWidget(self.widget_container_2, 0, 0, 1, 1)
self.stackedWidget.addWidget(self.page_3)
self.page = QtWidgets.QWidget()
self.page.setObjectName("page")
self.gridLayout = QtWidgets.QGridLayout(self.page)
self.gridLayout.setContentsMargins(0, 0, 0, 0)
self.gridLayout.setObjectName("gridLayout")
self.widget_container = QtWidgets.QWidget(self.page)
self.widget_container.setStyleSheet("QWidget#widget_container {border: 1px ridge gray; background-color: white}")
self.widget_container.setObjectName("widget_container")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.widget_container)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_2 = QtWidgets.QLabel(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.label_2.sizePolicy().hasHeightForWidth())
self.label_2.setSizePolicy(sizePolicy)
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.widget_3 = QtWidgets.QWidget(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.widget_3.sizePolicy().hasHeightForWidth())
self.widget_3.setSizePolicy(sizePolicy)
self.widget_3.setStyleSheet("border-top: 1px solid gray;\n"
"margin-top: 5px;")
self.widget_3.setObjectName("widget_3")
self.horizontalLayout.addWidget(self.widget_3)
self.verticalLayout_2.addLayout(self.horizontalLayout)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setContentsMargins(10, -1, -1, -1)
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.label_3 = QtWidgets.QLabel(self.widget_container)
self.label_3.setObjectName("label_3")
self.horizontalLayout_5.addWidget(self.label_3)
self.lineEdit = ComLineEdit(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.lineEdit.sizePolicy().hasHeightForWidth())
self.lineEdit.setSizePolicy(sizePolicy)
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.horizontalLayout_5.addWidget(self.lineEdit)
self.label_4 = QtWidgets.QLabel(self.widget_container)
self.label_4.setObjectName("label_4")
self.horizontalLayout_5.addWidget(self.label_4)
self.lineEdit_2 = ComLineEdit(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.lineEdit_2.sizePolicy().hasHeightForWidth())
self.lineEdit_2.setSizePolicy(sizePolicy)
self.lineEdit_2.setReadOnly(True)
self.lineEdit_2.setObjectName("lineEdit_2")
self.horizontalLayout_5.addWidget(self.lineEdit_2)
self.verticalLayout_2.addLayout(self.horizontalLayout_5)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label = QtWidgets.QLabel(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Preferred, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.label.sizePolicy().hasHeightForWidth())
self.label.setSizePolicy(sizePolicy)
self.label.setObjectName("label")
self.horizontalLayout_4.addWidget(self.label)
self.widget_2 = QtWidgets.QWidget(self.widget_container)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.widget_2.sizePolicy().hasHeightForWidth())
self.widget_2.setSizePolicy(sizePolicy)
self.widget_2.setStyleSheet("border-top: 1px solid gray;\n"
"margin-top: 5px;")
self.widget_2.setObjectName("widget_2")
self.horizontalLayout_4.addWidget(self.widget_2)
self.verticalLayout_2.addLayout(self.horizontalLayout_4)
self.verticalLayout = QtWidgets.QVBoxLayout()
self.verticalLayout.setContentsMargins(10, -1, -1, -1)
self.verticalLayout.setObjectName("verticalLayout")
self.checkBox = QtWidgets.QCheckBox(self.widget_container)
self.checkBox.setObjectName("checkBox")
self.verticalLayout.addWidget(self.checkBox)
self.checkBox_2 = QtWidgets.QCheckBox(self.widget_container)
self.checkBox_2.setObjectName("checkBox_2")
self.verticalLayout.addWidget(self.checkBox_2)
self.checkBox_3 = QtWidgets.QCheckBox(self.widget_container)
self.checkBox_3.setObjectName("checkBox_3")
self.verticalLayout.addWidget(self.checkBox_3)
self.checkBox_4 = QtWidgets.QCheckBox(self.widget_container)
self.checkBox_4.setObjectName("checkBox_4")
self.verticalLayout.addWidget(self.checkBox_4)
self.checkBox_5 = QtWidgets.QCheckBox(self.widget_container)
self.checkBox_5.setObjectName("checkBox_5")
self.verticalLayout.addWidget(self.checkBox_5)
self.verticalLayout_2.addLayout(self.verticalLayout)
spacerItem = QtWidgets.QSpacerItem(20, 304, QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Expanding)
self.verticalLayout_2.addItem(spacerItem)
self.gridLayout.addWidget(self.widget_container, 0, 0, 1, 1)
self.stackedWidget.addWidget(self.page)
self.gridLayout_3.addWidget(self.splitter, 0, 0, 1, 1)
self.retranslateUi(Settings)
self.stackedWidget.setCurrentIndex(2)
QtCore.QMetaObject.connectSlotsByName(Settings)
def retranslateUi(self, Settings):
_translate = QtCore.QCoreApplication.translate
Settings.setWindowTitle(_translate("Settings", "Settings"))
item = self.tableWidget.verticalHeaderItem(0)
item.setText(_translate("Settings", "1"))
item = self.tableWidget.verticalHeaderItem(1)
item.setText(_translate("Settings", "2"))
item = self.tableWidget.verticalHeaderItem(2)
item.setText(_translate("Settings", "3"))
item = self.tableWidget.verticalHeaderItem(3)
item.setText(_translate("Settings", "4"))
item = self.tableWidget.verticalHeaderItem(4)
item.setText(_translate("Settings", "5"))
item = self.tableWidget.verticalHeaderItem(5)
item.setText(_translate("Settings", "6"))
item = self.tableWidget.verticalHeaderItem(6)
item.setText(_translate("Settings", "7"))
item = self.tableWidget.verticalHeaderItem(7)
item.setText(_translate("Settings", "8"))
item = self.tableWidget.verticalHeaderItem(8)
item.setText(_translate("Settings", "9"))
item = self.tableWidget.verticalHeaderItem(9)
item.setText(_translate("Settings", "10"))
item = self.tableWidget.verticalHeaderItem(10)
item.setText(_translate("Settings", "11"))
item = self.tableWidget.verticalHeaderItem(11)
item.setText(_translate("Settings", "12"))
item = self.tableWidget.verticalHeaderItem(12)
item.setText(_translate("Settings", "13"))
item = self.tableWidget.verticalHeaderItem(13)
item.setText(_translate("Settings", "14"))
item = self.tableWidget.horizontalHeaderItem(0)
item.setText(_translate("Settings", "Name"))
item = self.tableWidget.horizontalHeaderItem(1)
item.setText(_translate("Settings", "Description"))
item = self.tableWidget.horizontalHeaderItem(2)
item.setText(_translate("Settings", "Status"))
item = self.tableWidget.horizontalHeaderItem(3)
item.setText(_translate("Settings", "Operation"))
__sortingEnabled = self.tableWidget.isSortingEnabled()
self.tableWidget.setSortingEnabled(False)
item = self.tableWidget.item(0, 0)
item.setText(_translate("Settings", "MAFFT v7.313"))
item = self.tableWidget.item(0, 1)
item.setText(_translate("Settings", "Mafft mutiple aligner"))
item.setToolTip(_translate("Settings", "Mafft mutiple aligner"))
item = self.tableWidget.item(0, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(1, 0)
item.setText(_translate("Settings", "Rscript 3.4.4"))
item = self.tableWidget.item(1, 1)
item.setText(_translate("Settings", "Scripting Front-End For R"))
item.setToolTip(_translate("Settings", "Scripting Front-End For R"))
item = self.tableWidget.item(1, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(2, 0)
item.setText(_translate("Settings", "Python 2.7 + PartitionFinder2"))
item = self.tableWidget.item(2, 1)
item.setText(_translate("Settings", "Python 2.7: Using for PartitionFinder"))
item.setToolTip(_translate("Settings", "Using for PartitionFinder"))
item = self.tableWidget.item(2, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(3, 0)
item.setText(_translate("Settings", "PartitionFinder2"))
item = self.tableWidget.item(3, 1)
item.setText(_translate("Settings", "PartitionFinder2: Python 2.7Selecting best-fit partitioning schemes and models of molecular evolution for phylogenetic analyses"))
item.setToolTip(_translate("Settings", "Selecting best-fit partitioning schemes and models of molecular evolution for phylogenetic analyses"))
item = self.tableWidget.item(3, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(4, 0)
item.setText(_translate("Settings", "Gblocks 0.91b"))
item = self.tableWidget.item(4, 1)
item.setText(_translate("Settings", "Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis"))
item.setToolTip(_translate("Settings", "Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis"))
item = self.tableWidget.item(4, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(5, 0)
item.setText(_translate("Settings", "IQ-TREE v. 1.6.8"))
item = self.tableWidget.item(5, 1)
item.setText(_translate("Settings", "Efficient software for phylogenomic inference"))
item = self.tableWidget.item(5, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(6, 0)
item.setText(_translate("Settings", "MrBayes 3.2.6"))
item = self.tableWidget.item(6, 1)
item.setText(_translate("Settings", "A free software program which performs Bayesian inference of phylogeny."))
item = self.tableWidget.item(6, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(7, 0)
item.setText(_translate("Settings", "tbl2asn"))
item = self.tableWidget.item(7, 1)
item.setText(_translate("Settings", "Automates the creation of sequence records for submission to GenBank"))
item = self.tableWidget.item(7, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(8, 0)
item.setText(_translate("Settings", "MPICH2"))
item = self.tableWidget.item(8, 1)
item.setText(_translate("Settings", "A high-performance and widely portable implementation of the Message Passing Interface (MPI) standard"))
item = self.tableWidget.item(8, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(9, 0)
item.setText(_translate("Settings", "JAVA (JRE>1.5) + MACSE v2.03"))
item = self.tableWidget.item(9, 1)
item.setText(_translate("Settings", "JAVA: Using for MACSE"))
item = self.tableWidget.item(9, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(10, 1)
item.setText(_translate("Settings", "MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons."))
item = self.tableWidget.item(10, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(11, 0)
item.setText(_translate("Settings", "trimAl v1.2"))
item = self.tableWidget.item(11, 1)
item.setText(_translate("Settings", "trimAl: a tool for automated alignment trimming"))
item = self.tableWidget.item(11, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(12, 0)
item.setText(_translate("Settings", "Perl 5 + HmmCleaner"))
item = self.tableWidget.item(12, 1)
item.setText(_translate("Settings", "Perl 5: Using for HmmCleaner"))
item = self.tableWidget.item(12, 2)
item.setText(_translate("Settings", "Uninstalled"))
item = self.tableWidget.item(13, 1)
item.setText(_translate("Settings", "HmmCleaner: Removing low similarity segments from your MSA"))
item = self.tableWidget.item(13, 2)
item.setText(_translate("Settings", "Uninstalled"))
self.tableWidget.setSortingEnabled(__sortingEnabled)
self.pushButton_6.setText(_translate("Settings", "Add Row"))
self.pushButton_7.setText(_translate("Settings", "Add Column"))
self.label_6.setToolTip(_translate("Settings", "Brief example"))
self.pushButton_8.setText(_translate("Settings", "Delete Row"))
self.pushButton_9.setText(_translate("Settings", "Delete Column"))
self.toolButton_3.setToolTip(_translate("Settings", "Add"))
self.toolButton_3.setText(_translate("Settings", "..."))
self.toolButton_4.setToolTip(_translate("Settings", "Delete"))
self.toolButton_4.setText(_translate("Settings", "..."))
self.toolButton_6.setToolTip(_translate("Settings", "Import settings"))
self.toolButton_6.setText(_translate("Settings", "..."))
self.toolButton_5.setToolTip(_translate("Settings", "Export settings"))
self.toolButton_5.setText(_translate("Settings", "..."))
self.label_2.setText(_translate("Settings", "General"))
self.label_3.setText(_translate("Settings", "Font:"))
self.lineEdit.setText(_translate("Settings", "Arial"))
self.label_4.setText(_translate("Settings", "Size:"))
self.lineEdit_2.setText(_translate("Settings", "10"))
self.label.setText(_translate("Settings", "Reminder settings"))
self.checkBox.setText(_translate("Settings", "Show the \'Previous results will be overwritten\' warning"))
self.checkBox_2.setText(_translate("Settings", "Show the \'Settings are saved automatically\' notification"))
self.checkBox_3.setText(_translate("Settings", "Check updates when opening PhyloSuite"))
self.checkBox_4.setText(_translate("Settings", "Popup auto-prepared inputs for functions"))
self.checkBox_5.setText(_translate("Settings", "Popup workplace selection when opening PhyloSuite"))
class Ui_WorkFlow(object):
def setupUi(self, WorkFlow):
WorkFlow.setObjectName("WorkFlow")
WorkFlow.resize(605, 663)
self.verticalLayout = QtWidgets.QVBoxLayout(WorkFlow)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox = QtWidgets.QGroupBox(WorkFlow)
self.groupBox.setObjectName("groupBox")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label = QtWidgets.QLabel(self.groupBox)
self.label.setObjectName("label")
self.horizontalLayout.addWidget(self.label)
self.comboBox = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.horizontalLayout.addWidget(self.comboBox)
self.toolButton = QtWidgets.QToolButton(self.groupBox)
self.toolButton.setText("")
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/add-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton.setIcon(icon)
self.toolButton.setAutoRaise(True)
self.toolButton.setObjectName("toolButton")
self.horizontalLayout.addWidget(self.toolButton)
self.toolButton_2 = QtWidgets.QToolButton(self.groupBox)
self.toolButton_2.setText("")
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_2.setIcon(icon1)
self.toolButton_2.setAutoRaise(True)
self.toolButton_2.setObjectName("toolButton_2")
self.horizontalLayout.addWidget(self.toolButton_2)
self.verticalLayout_2.addLayout(self.horizontalLayout)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_7 = QtWidgets.QLabel(self.groupBox)
self.label_7.setObjectName("label_7")
self.horizontalLayout_3.addWidget(self.label_7)
self.widget_2 = QtWidgets.QWidget(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Preferred)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.widget_2.sizePolicy().hasHeightForWidth())
self.widget_2.setSizePolicy(sizePolicy)
self.widget_2.setStyleSheet("border-top: 1px solid gray;\n"
"margin-top: 10px;")
self.widget_2.setObjectName("widget_2")
self.horizontalLayout_3.addWidget(self.widget_2)
self.verticalLayout_2.addLayout(self.horizontalLayout_3)
self.gridLayout = QtWidgets.QGridLayout()
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtWidgets.QLabel(self.groupBox)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 0, 0, 1, 1)
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setLayoutDirection(QtCore.Qt.LeftToRight)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/mafft1.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox.setIcon(icon2)
self.checkBox.setChecked(True)
self.checkBox.setObjectName("checkBox")
self.gridLayout.addWidget(self.checkBox, 0, 1, 1, 1)
self.checkBox_8 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_8.setLayoutDirection(QtCore.Qt.LeftToRight)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/M.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_8.setIcon(icon3)
self.checkBox_8.setChecked(False)
self.checkBox_8.setObjectName("checkBox_8")
self.gridLayout.addWidget(self.checkBox_8, 0, 2, 1, 1)
spacerItem = QtWidgets.QSpacerItem(163, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.gridLayout.addItem(spacerItem, 0, 3, 1, 3)
self.label_8 = QtWidgets.QLabel(self.groupBox)
self.label_8.setObjectName("label_8")
self.gridLayout.addWidget(self.label_8, 1, 0, 1, 1)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_3.setLayoutDirection(QtCore.Qt.LeftToRight)
icon4 = QtGui.QIcon()
icon4.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_simpline_22_2305632.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_3.setIcon(icon4)
self.checkBox_3.setChecked(False)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout.addWidget(self.checkBox_3, 1, 1, 1, 1)
self.checkBox_9 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_9.setLayoutDirection(QtCore.Qt.LeftToRight)
icon5 = QtGui.QIcon()
icon5.addPixmap(
QtGui.QPixmap(":/picture/resourses/icon--trim-confirm-0.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_9.setIcon(icon5)
self.checkBox_9.setChecked(False)
self.checkBox_9.setObjectName("checkBox_9")
self.gridLayout.addWidget(self.checkBox_9, 1, 2, 1, 1)
self.checkBox_10 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_10.setLayoutDirection(QtCore.Qt.LeftToRight)
icon6 = QtGui.QIcon()
icon6.addPixmap(QtGui.QPixmap(":/picture/resourses/clean.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_10.setIcon(icon6)
self.checkBox_10.setChecked(False)
self.checkBox_10.setObjectName("checkBox_10")
self.gridLayout.addWidget(self.checkBox_10, 1, 4, 1, 1)
spacerItem1 = QtWidgets.QSpacerItem(68, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.gridLayout.addItem(spacerItem1, 1, 5, 1, 2)
self.label_5 = QtWidgets.QLabel(self.groupBox)
self.label_5.setObjectName("label_5")
self.gridLayout.addWidget(self.label_5, 2, 0, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setLayoutDirection(QtCore.Qt.LeftToRight)
icon7 = QtGui.QIcon()
icon7.addPixmap(QtGui.QPixmap(":/picture/resourses/cat1.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_2.setIcon(icon7)
self.checkBox_2.setChecked(True)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout.addWidget(self.checkBox_2, 2, 1, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_5.setLayoutDirection(QtCore.Qt.LeftToRight)
icon8 = QtGui.QIcon()
icon8.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_tinder_334781.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_5.setIcon(icon8)
self.checkBox_5.setChecked(True)
self.checkBox_5.setObjectName("checkBox_5")
self.buttonGroup = QtWidgets.QButtonGroup(WorkFlow)
self.buttonGroup.setObjectName("buttonGroup")
self.buttonGroup.addButton(self.checkBox_5)
self.gridLayout.addWidget(self.checkBox_5, 2, 2, 1, 2)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setLayoutDirection(QtCore.Qt.LeftToRight)
icon9 = QtGui.QIcon()
icon9.addPixmap(QtGui.QPixmap(":/picture/resourses/pie-chart.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_4.setIcon(icon9)
self.checkBox_4.setObjectName("checkBox_4")
self.buttonGroup.addButton(self.checkBox_4)
self.gridLayout.addWidget(self.checkBox_4, 2, 4, 1, 2)
spacerItem2 = QtWidgets.QSpacerItem(163, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.gridLayout.addItem(spacerItem2, 2, 6, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox)
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 3, 0, 1, 1)
self.checkBox_6 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_6.setLayoutDirection(QtCore.Qt.LeftToRight)
icon10 = QtGui.QIcon()
icon10.addPixmap(
QtGui.QPixmap(":/picture/resourses/data-taxonomy-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_6.setIcon(icon10)
self.checkBox_6.setChecked(True)
self.checkBox_6.setObjectName("checkBox_6")
self.gridLayout.addWidget(self.checkBox_6, 3, 1, 1, 1)
self.checkBox_7 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_7.setLayoutDirection(QtCore.Qt.LeftToRight)
icon11 = QtGui.QIcon()
icon11.addPixmap(
QtGui.QPixmap(
":/picture/resourses/2000px-Paris_RER_B_icon.svg.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.checkBox_7.setIcon(icon11)
self.checkBox_7.setChecked(True)
self.checkBox_7.setObjectName("checkBox_7")
self.gridLayout.addWidget(self.checkBox_7, 3, 2, 1, 1)
spacerItem3 = QtWidgets.QSpacerItem(198, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.gridLayout.addItem(spacerItem3, 3, 3, 1, 3)
self.label_2 = ClickedLableGif(self.groupBox)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.gridLayout.addWidget(self.label_2, 3, 6, 1, 1)
self.verticalLayout_2.addLayout(self.gridLayout)
self.verticalLayout.addWidget(self.groupBox)
self.listWidget_workflow = QtWidgets.QListWidget(WorkFlow)
self.listWidget_workflow.setObjectName("listWidget_workflow")
self.verticalLayout.addWidget(self.listWidget_workflow)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.pushButton = ArrowPushButton(WorkFlow)
icon12 = QtGui.QIcon()
icon12.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon12)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_2.addWidget(self.pushButton)
self.pushButton_6 = QtWidgets.QPushButton(WorkFlow)
icon13 = QtGui.QIcon()
icon13.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_6.setIcon(icon13)
self.pushButton_6.setObjectName("pushButton_6")
self.horizontalLayout_2.addWidget(self.pushButton_6)
self.horizontalLayout_2.setStretch(0, 1)
self.horizontalLayout_2.setStretch(1, 1)
self.verticalLayout.addLayout(self.horizontalLayout_2)
self.retranslateUi(WorkFlow)
QtCore.QMetaObject.connectSlotsByName(WorkFlow)
def retranslateUi(self, WorkFlow):
_translate = QtCore.QCoreApplication.translate
WorkFlow.setWindowTitle(
_translate("WorkFlow", "Fast Phylogenetic Workflow"))
self.groupBox.setTitle(_translate("WorkFlow", "Analyses"))
self.label.setText(_translate("WorkFlow", "Workflow:"))
self.toolButton.setToolTip(
_translate("WorkFlow", "Add current settings to workflow"))
self.toolButton_2.setToolTip(
_translate("WorkFlow", "Delete current workflow"))
self.label_7.setText(
_translate("WorkFlow", "Select analyses to add them to the queue"))
self.label_4.setText(_translate("WorkFlow", "Sequence Alignment:"))
self.checkBox.setText(_translate("WorkFlow", "MAFFT"))
self.checkBox_8.setText(_translate("WorkFlow", "MACSE"))
self.label_8.setText(_translate("WorkFlow", "Alignment cleaning:"))
self.checkBox_3.setText(_translate("WorkFlow", "Gblocks"))
self.checkBox_9.setText(_translate("WorkFlow", "trimAl"))
self.checkBox_10.setText(_translate("WorkFlow", "HmmCleaner"))
self.label_5.setText(_translate("WorkFlow", "Model Selection:"))
self.checkBox_2.setText(_translate("WorkFlow", "Concatenation"))
self.checkBox_5.setText(_translate("WorkFlow", "ModelFinder"))
self.checkBox_4.setText(_translate("WorkFlow", "PartitionFinder"))
self.label_6.setText(_translate("WorkFlow", "Tree Reconstruction:"))
self.checkBox_6.setText(_translate("WorkFlow", "IQ-TREE"))
self.checkBox_7.setText(_translate("WorkFlow", "MrBayes"))
self.label_2.setToolTip(_translate("WorkFlow", "Brief example"))
self.pushButton.setText(_translate("WorkFlow", "Check | Start"))
self.pushButton_6.setText(_translate("WorkFlow", "Stop"))
class Ui_Gblocks(object):
def setupUi(self, Gblocks):
Gblocks.setObjectName("Gblocks")
Gblocks.resize(672, 598)
self.gridLayout_8 = QtWidgets.QGridLayout(Gblocks)
self.gridLayout_8.setObjectName("gridLayout_8")
self.groupBox_4 = QtWidgets.QGroupBox(Gblocks)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_4.setObjectName("gridLayout_4")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout_4.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout_4.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_4.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.horizontalLayout_2.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem)
self.label_7 = ClickedLableGif(self.groupBox_4)
self.label_7.setText("")
self.label_7.setObjectName("label_7")
self.horizontalLayout_2.addWidget(self.label_7)
self.gridLayout_4.addLayout(self.horizontalLayout_2, 1, 0, 1, 3)
self.gridLayout_8.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(Gblocks)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.spinBox_3 = QtWidgets.QSpinBox(self.groupBox)
self.spinBox_3.setMinimum(2)
self.spinBox_3.setMaximum(999)
self.spinBox_3.setProperty("value", 10)
self.spinBox_3.setObjectName("spinBox_3")
self.gridLayout.addWidget(self.spinBox_3, 4, 2, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox)
self.label_6.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 4, 0, 1, 2)
self.label_3 = QtWidgets.QLabel(self.groupBox)
self.label_3.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_3.setObjectName("label_3")
self.gridLayout.addWidget(self.label_3, 3, 0, 1, 2)
self.spinBox_2 = QtWidgets.QSpinBox(self.groupBox)
self.spinBox_2.setMaximum(999)
self.spinBox_2.setProperty("value", 8)
self.spinBox_2.setObjectName("spinBox_2")
self.gridLayout.addWidget(self.spinBox_2, 3, 2, 1, 1)
self.comboBox_2 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_2.sizePolicy().hasHeightForWidth())
self.comboBox_2.setSizePolicy(sizePolicy)
self.comboBox_2.setObjectName("comboBox_2")
self.gridLayout.addWidget(self.comboBox_2, 2, 2, 1, 1)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout.addWidget(self.comboBox_5, 5, 2, 1, 1)
self.comboBox_13 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_13.sizePolicy().hasHeightForWidth())
self.comboBox_13.setSizePolicy(sizePolicy)
self.comboBox_13.setObjectName("comboBox_13")
self.comboBox_13.addItem("")
self.comboBox_13.addItem("")
self.gridLayout.addWidget(self.comboBox_13, 6, 2, 1, 1)
self.label_12 = QtWidgets.QLabel(self.groupBox)
self.label_12.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_12.setObjectName("label_12")
self.gridLayout.addWidget(self.label_12, 5, 0, 1, 2)
self.label_11 = QtWidgets.QLabel(self.groupBox)
self.label_11.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_11.setObjectName("label_11")
self.gridLayout.addWidget(self.label_11, 1, 0, 1, 2)
self.comboBox_10 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_10.sizePolicy().hasHeightForWidth())
self.comboBox_10.setSizePolicy(sizePolicy)
self.comboBox_10.setObjectName("comboBox_10")
self.gridLayout.addWidget(self.comboBox_10, 1, 2, 1, 1)
self.label_2 = QtWidgets.QLabel(self.groupBox)
self.label_2.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_2.setObjectName("label_2")
self.gridLayout.addWidget(self.label_2, 2, 0, 1, 2)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_13 = QtWidgets.QLabel(self.groupBox)
self.label_13.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_13.setObjectName("label_13")
self.horizontalLayout.addWidget(self.label_13)
self.radioButton = QtWidgets.QRadioButton(self.groupBox)
self.radioButton.setChecked(True)
self.radioButton.setObjectName("radioButton")
self.horizontalLayout.addWidget(self.radioButton)
self.radioButton_2 = QtWidgets.QRadioButton(self.groupBox)
self.radioButton_2.setObjectName("radioButton_2")
self.horizontalLayout.addWidget(self.radioButton_2)
self.radioButton_3 = QtWidgets.QRadioButton(self.groupBox)
self.radioButton_3.setObjectName("radioButton_3")
self.horizontalLayout.addWidget(self.radioButton_3)
self.gridLayout.addLayout(self.horizontalLayout, 0, 0, 1, 3)
self.label_22 = QtWidgets.QLabel(self.groupBox)
self.label_22.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_22.setObjectName("label_22")
self.gridLayout.addWidget(self.label_22, 6, 0, 1, 2)
self.label_12.raise_()
self.comboBox_10.raise_()
self.comboBox_5.raise_()
self.label_3.raise_()
self.comboBox_2.raise_()
self.label_11.raise_()
self.label_2.raise_()
self.label_6.raise_()
self.spinBox_2.raise_()
self.spinBox_3.raise_()
self.label_22.raise_()
self.comboBox_13.raise_()
self.gridLayout_8.addWidget(self.groupBox, 1, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(Gblocks)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_18 = QtWidgets.QLabel(self.groupBox_2)
self.label_18.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_18.setObjectName("label_18")
self.gridLayout_2.addWidget(self.label_18, 0, 0, 1, 1)
self.lineEdit_3 = QtWidgets.QLineEdit(self.groupBox_2)
self.lineEdit_3.setReadOnly(True)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_2.addWidget(self.lineEdit_3, 0, 1, 1, 1)
self.label_19 = QtWidgets.QLabel(self.groupBox_2)
self.label_19.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_19.setObjectName("label_19")
self.gridLayout_2.addWidget(self.label_19, 0, 2, 1, 1)
self.spinBox = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox.sizePolicy().hasHeightForWidth())
self.spinBox.setSizePolicy(sizePolicy)
self.spinBox.setMinimum(50)
self.spinBox.setMaximum(500)
self.spinBox.setProperty("value", 60)
self.spinBox.setObjectName("spinBox")
self.gridLayout_2.addWidget(self.spinBox, 0, 3, 1, 1)
self.label_14 = QtWidgets.QLabel(self.groupBox_2)
self.label_14.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_14.setObjectName("label_14")
self.gridLayout_2.addWidget(self.label_14, 1, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setObjectName("comboBox_6")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.gridLayout_2.addWidget(self.comboBox_6, 1, 1, 1, 1)
self.label_21 = QtWidgets.QLabel(self.groupBox_2)
self.label_21.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_21.setObjectName("label_21")
self.gridLayout_2.addWidget(self.label_21, 1, 2, 1, 1)
self.comboBox_12 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_12.sizePolicy().hasHeightForWidth())
self.comboBox_12.setSizePolicy(sizePolicy)
self.comboBox_12.setObjectName("comboBox_12")
self.comboBox_12.addItem("")
self.comboBox_12.addItem("")
self.comboBox_12.addItem("")
self.comboBox_12.addItem("")
self.gridLayout_2.addWidget(self.comboBox_12, 1, 3, 1, 1)
self.label_15 = QtWidgets.QLabel(self.groupBox_2)
self.label_15.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_15.setObjectName("label_15")
self.gridLayout_2.addWidget(self.label_15, 2, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setObjectName("comboBox_7")
self.comboBox_7.addItem("")
self.comboBox_7.addItem("")
self.gridLayout_2.addWidget(self.comboBox_7, 2, 1, 1, 1)
self.label_17 = QtWidgets.QLabel(self.groupBox_2)
self.label_17.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_17.setObjectName("label_17")
self.gridLayout_2.addWidget(self.label_17, 2, 2, 1, 1)
self.comboBox_11 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_11.sizePolicy().hasHeightForWidth())
self.comboBox_11.setSizePolicy(sizePolicy)
self.comboBox_11.setObjectName("comboBox_11")
self.comboBox_11.addItem("")
self.comboBox_11.addItem("")
self.gridLayout_2.addWidget(self.comboBox_11, 2, 3, 1, 1)
self.label_16 = QtWidgets.QLabel(self.groupBox_2)
self.label_16.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_16.setObjectName("label_16")
self.gridLayout_2.addWidget(self.label_16, 3, 0, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_2.addWidget(self.comboBox_8, 3, 1, 1, 1)
self.label_20 = QtWidgets.QLabel(self.groupBox_2)
self.label_20.setAlignment(QtCore.Qt.AlignRight
| QtCore.Qt.AlignTrailing
| QtCore.Qt.AlignVCenter)
self.label_20.setObjectName("label_20")
self.gridLayout_2.addWidget(self.label_20, 3, 2, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_2.addWidget(self.comboBox_9, 3, 3, 1, 1)
self.gridLayout_8.addWidget(self.groupBox_2, 2, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(Gblocks)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.gridLayout_8.addWidget(self.groupBox_3, 3, 0, 1, 1)
self.groupBox_6 = QtWidgets.QGroupBox(Gblocks)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 0, 0, 1, 1)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon2)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.gridLayout_8.addWidget(self.groupBox_6, 4, 0, 1, 1)
self.retranslateUi(Gblocks)
self.radioButton_2.toggled['bool'].connect(self.comboBox_13.setEnabled)
self.radioButton_3.toggled['bool'].connect(
self.comboBox_13.setDisabled)
self.radioButton.toggled['bool'].connect(self.comboBox_13.setDisabled)
QtCore.QMetaObject.connectSlotsByName(Gblocks)
Gblocks.setTabOrder(self.radioButton, self.pushButton_3)
Gblocks.setTabOrder(self.pushButton_3, self.spinBox_3)
Gblocks.setTabOrder(self.spinBox_3, self.comboBox_4)
Gblocks.setTabOrder(self.comboBox_4, self.comboBox_2)
Gblocks.setTabOrder(self.comboBox_2, self.comboBox_5)
Gblocks.setTabOrder(self.comboBox_5, self.comboBox_13)
Gblocks.setTabOrder(self.comboBox_13, self.comboBox_10)
Gblocks.setTabOrder(self.comboBox_10, self.pushButton)
Gblocks.setTabOrder(self.pushButton, self.pushButton_2)
Gblocks.setTabOrder(self.pushButton_2, self.pushButton_9)
Gblocks.setTabOrder(self.pushButton_9, self.spinBox_2)
Gblocks.setTabOrder(self.spinBox_2, self.radioButton_2)
Gblocks.setTabOrder(self.radioButton_2, self.radioButton_3)
Gblocks.setTabOrder(self.radioButton_3, self.lineEdit_3)
Gblocks.setTabOrder(self.lineEdit_3, self.comboBox_6)
Gblocks.setTabOrder(self.comboBox_6, self.comboBox_7)
Gblocks.setTabOrder(self.comboBox_7, self.comboBox_8)
Gblocks.setTabOrder(self.comboBox_8, self.comboBox_11)
Gblocks.setTabOrder(self.comboBox_11, self.spinBox)
Gblocks.setTabOrder(self.spinBox, self.comboBox_12)
Gblocks.setTabOrder(self.comboBox_12, self.comboBox_9)
def retranslateUi(self, Gblocks):
_translate = QtCore.QCoreApplication.translate
Gblocks.setWindowTitle(_translate("Gblocks", "Gblocks"))
self.groupBox_4.setTitle(_translate("Gblocks", "Input"))
self.label_4.setText(_translate("Gblocks", "Input:"))
self.label_5.setText(
_translate(
"Gblocks",
"<html><head/><body><p>Try to drag your <span style=\" font-weight:600; color:#ff0000;\">FASTA</span> or <span style=\" font-weight:600; color:#ff0000;\">NBRF/PIR</span> file and drop here if you want to use custom files</p></body></html>"
))
self.label_7.setToolTip(_translate("Gblocks", "Brief example"))
self.groupBox.setTitle(_translate("Gblocks", "Parameters"))
self.label_6.setText(
_translate("Gblocks", "Minimum Length Of A Block:"))
self.label_3.setText(
_translate("Gblocks",
"Maximum Number Of Contiguous Nonconserved Positions:"))
self.comboBox_5.setItemText(0, _translate("Gblocks", "With Half"))
self.comboBox_5.setItemText(1, _translate("Gblocks", "All"))
self.comboBox_5.setItemText(2, _translate("Gblocks", "None"))
self.comboBox_13.setItemText(0, _translate("Gblocks", "Yes"))
self.comboBox_13.setItemText(1, _translate("Gblocks", "No"))
self.label_12.setText(_translate("Gblocks", "Allowed Gap Positions:"))
self.label_11.setText(
_translate(
"Gblocks",
"Minimum Number Of Sequences For A Conserved Position:"))
self.label_2.setText(
_translate("Gblocks",
"Minimum Number Of Sequences For A Flank Position:"))
self.label_13.setText(_translate("Gblocks", "Data Type:"))
self.radioButton.setText(_translate("Gblocks", "Nucleotide"))
self.radioButton_2.setText(_translate("Gblocks", "Protein"))
self.radioButton_3.setText(_translate("Gblocks", "Codons"))
self.label_22.setText(_translate("Gblocks",
"Use Similarity Matrices:"))
self.groupBox_2.setTitle(_translate("Gblocks", "Save Options"))
self.label_18.setText(_translate("Gblocks", "Generic File Extension:"))
self.lineEdit_3.setText(_translate("Gblocks", "-gb"))
self.label_19.setText(
_translate("Gblocks",
"Characters Per Line In Results And Parameters File:"))
self.label_14.setText(_translate("Gblocks", "Selected Blocks:"))
self.comboBox_6.setItemText(0, _translate("Gblocks", "Save"))
self.comboBox_6.setItemText(1, _translate("Gblocks", "Don\'t Save"))
self.label_21.setText(
_translate("Gblocks", "Results And Parameters File:"))
self.comboBox_12.setItemText(0, _translate("Gblocks", "Save"))
self.comboBox_12.setItemText(1, _translate("Gblocks", "Save Text"))
self.comboBox_12.setItemText(2, _translate("Gblocks", "Save Short"))
self.comboBox_12.setItemText(3, _translate("Gblocks", "Don\'t Save"))
self.label_15.setText(_translate("Gblocks", "Nonconserved Blocks:"))
self.comboBox_7.setItemText(0, _translate("Gblocks", "Don\'t Save"))
self.comboBox_7.setItemText(1, _translate("Gblocks", "Save"))
self.label_17.setText(
_translate("Gblocks", "Mask File With The Selected Blocks:"))
self.comboBox_11.setItemText(0, _translate("Gblocks", "Don\'t Save"))
self.comboBox_11.setItemText(1, _translate("Gblocks", "Save"))
self.label_16.setText(_translate("Gblocks", "Ungapped Alignment:"))
self.comboBox_8.setItemText(0, _translate("Gblocks", "Don\'t Save"))
self.comboBox_8.setItemText(1, _translate("Gblocks", "Save"))
self.label_20.setText(
_translate("Gblocks", "Postscript File With The Selected Blocks:"))
self.comboBox_9.setItemText(0, _translate("Gblocks", "Don\'t Save"))
self.comboBox_9.setItemText(1, _translate("Gblocks", "Save"))
self.groupBox_3.setTitle(_translate("Gblocks", "Run"))
self.pushButton.setText(_translate("Gblocks", "Start"))
self.pushButton_2.setText(_translate("Gblocks", "Stop"))
self.groupBox_6.setTitle(_translate("Gblocks", "Progress"))
self.pushButton_9.setText(_translate("Gblocks", "Show log"))
class Ui_IQTREE(object):
def setupUi(self, IQTREE):
IQTREE.setObjectName("IQTREE")
IQTREE.resize(849, 553)
self.gridLayout_5 = QtWidgets.QGridLayout(IQTREE)
self.gridLayout_5.setObjectName("gridLayout_5")
self.scrollArea = QtWidgets.QScrollArea(IQTREE)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setLineWidth(0)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, 0, 831, 535))
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.verticalLayout = QtWidgets.QVBoxLayout(self.scrollAreaWidgetContents)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox_4 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_4.setObjectName("groupBox_4")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox_4)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.horizontalLayout_6 = QtWidgets.QHBoxLayout()
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.gridLayout_2 = QtWidgets.QGridLayout()
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout_2.addWidget(self.label_5, 0, 0, 1, 1)
self.comboBox_11 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_11.sizePolicy().hasHeightForWidth())
self.comboBox_11.setSizePolicy(sizePolicy)
self.comboBox_11.setAcceptDrops(True)
self.comboBox_11.setEditable(True)
self.comboBox_11.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_11.setObjectName("comboBox_11")
self.gridLayout_2.addWidget(self.comboBox_11, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.checkBox_8 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_8.setObjectName("checkBox_8")
self.gridLayout_2.addWidget(self.checkBox_8, 1, 0, 1, 1)
self.lineEdit_3 = InputQLineEdit(self.groupBox_4)
self.lineEdit_3.setEnabled(False)
self.lineEdit_3.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_3.setReadOnly(True)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_2.addWidget(self.lineEdit_3, 1, 1, 1, 1)
self.pushButton_22 = QtWidgets.QPushButton(self.groupBox_4)
self.pushButton_22.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_22.sizePolicy().hasHeightForWidth())
self.pushButton_22.setSizePolicy(sizePolicy)
self.pushButton_22.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_22.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_22.setStyleSheet("")
self.pushButton_22.setText("")
self.pushButton_22.setObjectName("pushButton_22")
self.gridLayout_2.addWidget(self.pushButton_22, 1, 2, 1, 1)
self.horizontalLayout_6.addLayout(self.gridLayout_2)
self.gridLayout_6 = QtWidgets.QGridLayout()
self.gridLayout_6.setObjectName("gridLayout_6")
self.label_24 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_6.addWidget(self.label_24, 0, 0, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(100, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_6.addWidget(self.comboBox_3, 0, 1, 1, 2)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.gridLayout_6.addWidget(self.label_8, 1, 0, 1, 2)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox_4)
self.comboBox_5.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(95, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout_6.addWidget(self.comboBox_5, 1, 2, 1, 1)
self.horizontalLayout_6.addLayout(self.gridLayout_6)
self.horizontalLayout_6.setStretch(0, 5)
self.horizontalLayout_6.setStretch(1, 2)
self.verticalLayout_2.addLayout(self.horizontalLayout_6)
self.horizontalLayout_7 = QtWidgets.QHBoxLayout()
self.horizontalLayout_7.setObjectName("horizontalLayout_7")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_22 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.horizontalLayout_2.addWidget(self.label_22)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.horizontalLayout_2.addWidget(self.comboBox_9)
self.horizontalLayout_7.addLayout(self.horizontalLayout_2)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.checkBox_9 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_9.setChecked(True)
self.checkBox_9.setObjectName("checkBox_9")
self.horizontalLayout_3.addWidget(self.checkBox_9)
self.comboBox_10 = CheckableComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_10.sizePolicy().hasHeightForWidth())
self.comboBox_10.setSizePolicy(sizePolicy)
self.comboBox_10.setMinimumSize(QtCore.QSize(95, 26))
self.comboBox_10.setObjectName("comboBox_10")
self.horizontalLayout_3.addWidget(self.comboBox_10)
self.horizontalLayout_7.addLayout(self.horizontalLayout_3)
self.horizontalLayout_7.setStretch(0, 1)
self.horizontalLayout_7.setStretch(1, 1)
self.verticalLayout_2.addLayout(self.horizontalLayout_7)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout_5.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_5.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.groupBox_4)
self.label_3.setObjectName("label_3")
self.horizontalLayout_5.addWidget(self.label_3)
self.label = ClickedLableGif(self.groupBox_4)
self.label.setText("")
self.label.setObjectName("label")
self.horizontalLayout_5.addWidget(self.label)
self.verticalLayout_2.addLayout(self.horizontalLayout_5)
self.verticalLayout.addWidget(self.groupBox_4)
self.groupBox = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox.setToolTip("")
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setAlignment(QtCore.Qt.AlignRight|QtCore.Qt.AlignTrailing|QtCore.Qt.AlignVCenter)
self.label_25.setObjectName("label_25")
self.gridLayout.addWidget(self.label_25, 0, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_7.setObjectName("comboBox_7")
self.gridLayout.addWidget(self.comboBox_7, 0, 1, 1, 1)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setAlignment(QtCore.Qt.AlignRight|QtCore.Qt.AlignTrailing|QtCore.Qt.AlignVCenter)
self.label_27.setObjectName("label_27")
self.gridLayout.addWidget(self.label_27, 0, 2, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.gridLayout.addWidget(self.comboBox_6, 0, 3, 1, 1)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label_29 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_29.setFont(font)
self.label_29.setObjectName("label_29")
self.horizontalLayout_4.addWidget(self.label_29)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout_4.addWidget(self.checkBox_3)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setObjectName("checkBox_4")
self.horizontalLayout_4.addWidget(self.checkBox_4)
self.gridLayout.addLayout(self.horizontalLayout_4, 0, 4, 1, 1)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout.addWidget(self.label_26, 1, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout.addWidget(self.comboBox_4, 1, 1, 1, 1)
self.label_28 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_28.setFont(font)
self.label_28.setObjectName("label_28")
self.gridLayout.addWidget(self.label_28, 1, 2, 1, 1)
self.spinBox = QtWidgets.QSpinBox(self.groupBox)
self.spinBox.setMinimum(2)
self.spinBox.setMaximum(64)
self.spinBox.setProperty("value", 4)
self.spinBox.setObjectName("spinBox")
self.gridLayout.addWidget(self.spinBox, 1, 3, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setAutoRepeat(False)
self.checkBox_2.setAutoExclusive(False)
self.checkBox_2.setObjectName("checkBox_2")
self.horizontalLayout.addWidget(self.checkBox_2)
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setObjectName("checkBox")
self.horizontalLayout.addWidget(self.checkBox)
self.gridLayout.addLayout(self.horizontalLayout, 1, 4, 1, 1)
self.verticalLayout.addWidget(self.groupBox)
self.groupBox_2 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_3.setObjectName("gridLayout_3")
self.label_30 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_30.setFont(font)
self.label_30.setObjectName("label_30")
self.gridLayout_3.addWidget(self.label_30, 0, 0, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_3.addWidget(self.comboBox_8, 0, 1, 1, 1)
self.label_35 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_35.setFont(font)
self.label_35.setObjectName("label_35")
self.gridLayout_3.addWidget(self.label_35, 0, 2, 1, 1)
self.spinBox_3 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_3.sizePolicy().hasHeightForWidth())
self.spinBox_3.setSizePolicy(sizePolicy)
self.spinBox_3.setMinimum(100)
self.spinBox_3.setMaximum(1000000)
self.spinBox_3.setSingleStep(10)
self.spinBox_3.setProperty("value", 5000)
self.spinBox_3.setObjectName("spinBox_3")
self.gridLayout_3.addWidget(self.spinBox_3, 0, 3, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_5.setChecked(True)
self.checkBox_5.setObjectName("checkBox_5")
self.gridLayout_3.addWidget(self.checkBox_5, 0, 4, 1, 1)
self.checkBox_7 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_7.setObjectName("checkBox_7")
self.gridLayout_3.addWidget(self.checkBox_7, 0, 5, 1, 2)
self.label_36 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_36.setFont(font)
self.label_36.setObjectName("label_36")
self.gridLayout_3.addWidget(self.label_36, 1, 0, 1, 1)
self.spinBox_4 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_4.sizePolicy().hasHeightForWidth())
self.spinBox_4.setSizePolicy(sizePolicy)
self.spinBox_4.setMinimum(1000)
self.spinBox_4.setMaximum(100000000)
self.spinBox_4.setSingleStep(100)
self.spinBox_4.setObjectName("spinBox_4")
self.gridLayout_3.addWidget(self.spinBox_4, 1, 1, 1, 1)
self.label_37 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_37.setFont(font)
self.label_37.setObjectName("label_37")
self.gridLayout_3.addWidget(self.label_37, 1, 2, 1, 1)
self.doubleSpinBox = QtWidgets.QDoubleSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox.sizePolicy().hasHeightForWidth())
self.doubleSpinBox.setSizePolicy(sizePolicy)
self.doubleSpinBox.setMinimum(0.9)
self.doubleSpinBox.setMaximum(0.99)
self.doubleSpinBox.setSingleStep(0.01)
self.doubleSpinBox.setObjectName("doubleSpinBox")
self.gridLayout_3.addWidget(self.doubleSpinBox, 1, 3, 1, 1)
self.checkBox_6 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_6.setChecked(True)
self.checkBox_6.setObjectName("checkBox_6")
self.gridLayout_3.addWidget(self.checkBox_6, 1, 4, 1, 2)
self.spinBox_5 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_5.sizePolicy().hasHeightForWidth())
self.spinBox_5.setSizePolicy(sizePolicy)
self.spinBox_5.setToolTip("")
self.spinBox_5.setMinimum(1000)
self.spinBox_5.setMaximum(100000000)
self.spinBox_5.setSingleStep(100)
self.spinBox_5.setObjectName("spinBox_5")
self.gridLayout_3.addWidget(self.spinBox_5, 1, 6, 1, 2)
self.verticalLayout.addWidget(self.groupBox_2)
self.groupBox_3 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_8 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_8.setObjectName("horizontalLayout_8")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_8.addWidget(self.pushButton)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon1)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.horizontalLayout_8.addWidget(self.pushButton_continue)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_8.addWidget(self.pushButton_2)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_6)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.gridLayout_5.addWidget(self.scrollArea, 0, 0, 1, 1)
self.label_24.setBuddy(self.comboBox_3)
self.retranslateUi(IQTREE)
self.checkBox_2.toggled['bool'].connect(self.checkBox_3.setDisabled)
self.checkBox_2.toggled['bool'].connect(self.checkBox_4.setDisabled)
self.checkBox_6.toggled['bool'].connect(self.spinBox_5.setEnabled)
self.checkBox_2.toggled['bool'].connect(self.label_29.setDisabled)
self.checkBox_9.clicked['bool'].connect(self.comboBox_10.setEnabled)
QtCore.QMetaObject.connectSlotsByName(IQTREE)
IQTREE.setTabOrder(self.pushButton_3, self.lineEdit_3)
IQTREE.setTabOrder(self.lineEdit_3, self.pushButton_9)
IQTREE.setTabOrder(self.pushButton_9, self.pushButton_22)
IQTREE.setTabOrder(self.pushButton_22, self.pushButton_2)
IQTREE.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, IQTREE):
_translate = QtCore.QCoreApplication.translate
IQTREE.setWindowTitle(_translate("IQTREE", "IQ-TREE"))
self.groupBox_4.setTitle(_translate("IQTREE", "Input"))
self.label_5.setText(_translate("IQTREE", "Alignment File:"))
self.checkBox_8.setText(_translate("IQTREE", "Partition Mode:"))
self.lineEdit_3.setPlaceholderText(_translate("IQTREE", "Optional!"))
self.label_24.setText(_translate("IQTREE", "Seq. Type:"))
self.comboBox_3.setItemText(0, _translate("IQTREE", "Auto detect"))
self.comboBox_3.setItemText(1, _translate("IQTREE", "DNA"))
self.comboBox_3.setItemText(2, _translate("IQTREE", "Protein"))
self.comboBox_3.setItemText(3, _translate("IQTREE", "Codon"))
self.comboBox_3.setItemText(4, _translate("IQTREE", "Binary"))
self.comboBox_3.setItemText(5, _translate("IQTREE", "Morphology"))
self.comboBox_3.setItemText(6, _translate("IQTREE", "DNA-->AA"))
self.label_8.setText(_translate("IQTREE", "Partition Style:"))
self.comboBox_5.setItemText(0, _translate("IQTREE", "Edge-linked"))
self.comboBox_5.setItemText(1, _translate("IQTREE", "Edge-unlinked"))
self.label_22.setText(_translate("IQTREE", "Code Table:"))
self.comboBox_9.setItemText(0, _translate("IQTREE", "1 The standard code"))
self.comboBox_9.setItemText(1, _translate("IQTREE", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(2, _translate("IQTREE", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(3, _translate("IQTREE", "4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"))
self.comboBox_9.setItemText(4, _translate("IQTREE", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(5, _translate("IQTREE", "6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(6, _translate("IQTREE", "9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(7, _translate("IQTREE", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(8, _translate("IQTREE", "11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(9, _translate("IQTREE", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(10, _translate("IQTREE", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(11, _translate("IQTREE", "14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(12, _translate("IQTREE", "16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(13, _translate("IQTREE", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(14, _translate("IQTREE", "22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(15, _translate("IQTREE", "23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(16, _translate("IQTREE", "24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(17, _translate("IQTREE", "25 Candidate Division SR1 and Gracilibacteria Code"))
self.checkBox_9.setText(_translate("IQTREE", "Outgroup (s):"))
self.label_14.setText(_translate("IQTREE", "<html><head/><body><p>Click <a href=\"http://www.iqtree.org/doc/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">IQ-TREE</span></p></body></html>"))
self.label_3.setText(_translate("IQTREE", "Demo:"))
self.label.setToolTip(_translate("IQTREE", "Brief example"))
self.groupBox.setTitle(_translate("IQTREE", "Substitution Model Options"))
self.label_25.setText(_translate("IQTREE", "Models:"))
self.label_27.setText(_translate("IQTREE", "Threads:"))
self.label_29.setText(_translate("IQTREE", "Rate heterogeneity:"))
self.checkBox_3.setToolTip(_translate("IQTREE", "Discrete Gamma model"))
self.checkBox_3.setText(_translate("IQTREE", "[+G]"))
self.checkBox_4.setToolTip(_translate("IQTREE", "Allowing for a proportion of invariable sites"))
self.checkBox_4.setText(_translate("IQTREE", "[+I]"))
self.label_26.setText(_translate("IQTREE", "State freq:"))
self.comboBox_4.setItemText(0, _translate("IQTREE", "Empirical (from data)"))
self.comboBox_4.setItemText(1, _translate("IQTREE", "AA model (from matrix)"))
self.comboBox_4.setItemText(2, _translate("IQTREE", "ML-optimized"))
self.comboBox_4.setItemText(3, _translate("IQTREE", "Codon F1X4"))
self.comboBox_4.setItemText(4, _translate("IQTREE", "Codon F3X4"))
self.label_28.setText(_translate("IQTREE", "#rate categories:"))
self.checkBox_2.setText(_translate("IQTREE", "FreeRate heterogeneity [+R]"))
self.checkBox.setToolTip(_translate("IQTREE", "Ascertainment bias correction"))
self.checkBox.setText(_translate("IQTREE", "[+ASC]"))
self.groupBox_2.setTitle(_translate("IQTREE", "Branch Support Analysis"))
self.label_30.setToolTip(_translate("IQTREE", "Bootstrap analysis"))
self.label_30.setText(_translate("IQTREE", "Bootstrap:"))
self.comboBox_8.setItemText(0, _translate("IQTREE", "Ultrafast"))
self.comboBox_8.setItemText(1, _translate("IQTREE", "Standard"))
self.comboBox_8.setItemText(2, _translate("IQTREE", "None"))
self.label_35.setText(_translate("IQTREE", "Num of bootstrap:"))
self.checkBox_5.setToolTip(_translate("IQTREE", "Write bootstrap trees to .ufboot file"))
self.checkBox_5.setText(_translate("IQTREE", "Create .ufboot file"))
self.checkBox_7.setText(_translate("IQTREE", "Approximate Bayes test"))
self.label_36.setToolTip(_translate("IQTREE", "Maximum iterations"))
self.label_36.setText(_translate("IQTREE", "Max. iter.:"))
self.spinBox_4.setToolTip(_translate("IQTREE", "Maximum iterations"))
self.label_37.setToolTip(_translate("IQTREE", "Minimum correlation coefficient"))
self.label_37.setText(_translate("IQTREE", "Minimum cor. coef.:"))
self.doubleSpinBox.setToolTip(_translate("IQTREE", "Minimum correlation coefficient"))
self.checkBox_6.setText(_translate("IQTREE", "SH-aLRT branch test | replicates:"))
self.groupBox_3.setTitle(_translate("IQTREE", "Run"))
self.pushButton.setText(_translate("IQTREE", "Start"))
self.pushButton_continue.setText(_translate("IQTREE", "Continue Previous Analysis"))
self.pushButton_2.setText(_translate("IQTREE", "Stop"))
self.groupBox_6.setTitle(_translate("IQTREE", "Progress"))
self.pushButton_9.setText(_translate("IQTREE", "Show log"))
class Ui_parseANNT(object):
def setupUi(self, parseANNT):
parseANNT.setObjectName("parseANNT")
parseANNT.resize(501, 496)
self.gridLayout_3 = QtWidgets.QGridLayout(parseANNT)
self.gridLayout_3.setObjectName("gridLayout_3")
self.groupBox_4 = QtWidgets.QGroupBox(parseANNT)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout.setObjectName("gridLayout")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox_4)
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 1, 0, 1, 1)
self.comboBox_5 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setAcceptDrops(True)
self.comboBox_5.setEditable(True)
self.comboBox_5.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_5.setObjectName("comboBox_5")
self.gridLayout.addWidget(self.comboBox_5, 1, 1, 1, 1)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout.addWidget(self.pushButton_4, 1, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.toolButton = QtWidgets.QToolButton(self.groupBox_4)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/cog.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton.setIcon(icon)
self.toolButton.setAutoRaise(True)
self.toolButton.setObjectName("toolButton")
self.horizontalLayout.addWidget(self.toolButton)
self.label_5 = ClickedLableGif(self.groupBox_4)
self.label_5.setText("")
self.label_5.setObjectName("label_5")
self.horizontalLayout.addWidget(self.label_5)
self.gridLayout.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.gridLayout_3.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(parseANNT)
self.groupBox.setObjectName("groupBox")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_22 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.gridLayout_2.addWidget(self.label_22, 0, 0, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_2.addWidget(self.comboBox_9, 0, 1, 1, 1)
self.label = QtWidgets.QLabel(self.groupBox)
self.label.setObjectName("label")
self.gridLayout_2.addWidget(self.label, 0, 2, 1, 1)
self.comboBox = QtWidgets.QComboBox(self.groupBox)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.gridLayout_2.addWidget(self.comboBox, 0, 3, 1, 1)
self.label_2 = QtWidgets.QLabel(self.groupBox)
self.label_2.setObjectName("label_2")
self.gridLayout_2.addWidget(self.label_2, 1, 0, 1, 1)
self.lineEdit = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout_2.addWidget(self.lineEdit, 1, 1, 1, 1)
self.label_3 = QtWidgets.QLabel(self.groupBox)
self.label_3.setObjectName("label_3")
self.gridLayout_2.addWidget(self.label_3, 1, 2, 1, 1)
self.lineEdit_2 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_2.setText("")
self.lineEdit_2.setPlaceholderText("")
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout_2.addWidget(self.lineEdit_2, 1, 3, 1, 1)
self.label_7 = QtWidgets.QLabel(self.groupBox)
self.label_7.setObjectName("label_7")
self.gridLayout_2.addWidget(self.label_7, 2, 0, 1, 1)
self.lineEdit_3 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_2.addWidget(self.lineEdit_3, 2, 1, 1, 1)
self.label_8 = QtWidgets.QLabel(self.groupBox)
self.label_8.setObjectName("label_8")
self.gridLayout_2.addWidget(self.label_8, 2, 2, 1, 1)
self.lineEdit_4 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_4.setObjectName("lineEdit_4")
self.gridLayout_2.addWidget(self.lineEdit_4, 2, 3, 1, 1)
self.label_12 = QtWidgets.QLabel(self.groupBox)
self.label_12.setObjectName("label_12")
self.gridLayout_2.addWidget(self.label_12, 3, 0, 1, 1)
self.lineEdit_7 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_7.setObjectName("lineEdit_7")
self.gridLayout_2.addWidget(self.lineEdit_7, 3, 1, 1, 1)
self.label_13 = QtWidgets.QLabel(self.groupBox)
self.label_13.setObjectName("label_13")
self.gridLayout_2.addWidget(self.label_13, 3, 2, 1, 1)
self.lineEdit_8 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_8.setObjectName("lineEdit_8")
self.gridLayout_2.addWidget(self.lineEdit_8, 3, 3, 1, 1)
self.label_11 = QtWidgets.QLabel(self.groupBox)
self.label_11.setObjectName("label_11")
self.gridLayout_2.addWidget(self.label_11, 4, 0, 1, 1)
self.dateEdit = QtWidgets.QDateEdit(self.groupBox)
self.dateEdit.setCurrentSection(QtWidgets.QDateTimeEdit.YearSection)
self.dateEdit.setCalendarPopup(True)
self.dateEdit.setCurrentSectionIndex(0)
self.dateEdit.setObjectName("dateEdit")
self.gridLayout_2.addWidget(self.dateEdit, 4, 1, 1, 1)
self.label_9 = QtWidgets.QLabel(self.groupBox)
self.label_9.setObjectName("label_9")
self.gridLayout_2.addWidget(self.label_9, 4, 2, 1, 1)
self.lineEdit_5 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_5.setObjectName("lineEdit_5")
self.gridLayout_2.addWidget(self.lineEdit_5, 4, 3, 1, 1)
self.label_10 = QtWidgets.QLabel(self.groupBox)
self.label_10.setObjectName("label_10")
self.gridLayout_2.addWidget(self.label_10, 5, 0, 1, 1)
self.lineEdit_6 = QtWidgets.QLineEdit(self.groupBox)
self.lineEdit_6.setObjectName("lineEdit_6")
self.gridLayout_2.addWidget(self.lineEdit_6, 5, 1, 1, 3)
self.gridLayout_2.setColumnStretch(0, 1)
self.gridLayout_2.setColumnStretch(1, 4)
self.gridLayout_2.setColumnStretch(2, 1)
self.gridLayout_2.setColumnStretch(3, 4)
self.gridLayout_3.addWidget(self.groupBox, 1, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(parseANNT)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_5.setObjectName("gridLayout_5")
self.pushButton = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.gridLayout_5.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_5.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_5.setColumnStretch(0, 1)
self.gridLayout_5.setColumnStretch(1, 1)
self.gridLayout_3.addWidget(self.groupBox_3, 2, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(parseANNT)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_4.setObjectName("gridLayout_4")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_2)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_4.addWidget(self.progressBar, 0, 0, 1, 1)
self.gridLayout_3.addWidget(self.groupBox_2, 3, 0, 1, 1)
self.label_22.setBuddy(self.comboBox_9)
self.retranslateUi(parseANNT)
QtCore.QMetaObject.connectSlotsByName(parseANNT)
def retranslateUi(self, parseANNT):
_translate = QtCore.QCoreApplication.translate
parseANNT.setWindowTitle(_translate("parseANNT", "Parse Annotation"))
self.groupBox_4.setTitle(_translate("parseANNT", "Input"))
self.label_4.setText(_translate("parseANNT", "Annotation File:"))
self.label_6.setText(_translate("parseANNT", "Template File:"))
self.label_14.setText(
_translate(
"parseANNT",
"<html><head/><body><p>Click <a href=\"https://submit.ncbi.nlm.nih.gov/genbank/template/submission/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to make a <span style=\" font-weight:600; color:#ff0000;\">template</span> file</p></body></html>"
))
self.toolButton.setToolTip(
_translate("parseANNT", "Configure name replacing"))
self.toolButton.setText(_translate("parseANNT", "..."))
self.label_5.setToolTip(_translate("parseANNT", "Brief example"))
self.groupBox.setTitle(_translate("parseANNT", "Parameters"))
self.label_22.setText(_translate("parseANNT", "Code Table:"))
self.comboBox_9.setItemText(
0, _translate("parseANNT", "1 The standard code"))
self.comboBox_9.setItemText(
1, _translate("parseANNT", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(
2,
_translate(
"parseANNT",
"4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"
))
self.comboBox_9.setItemText(
3, _translate("parseANNT", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(
4,
_translate("parseANNT",
"9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(
5, _translate("parseANNT", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(
6,
_translate("parseANNT",
"14 Alternative flatworm mitochondrial code"))
self.label.setText(_translate("parseANNT", "Completeness:"))
self.comboBox.setItemText(0, _translate("parseANNT", "Complete"))
self.comboBox.setItemText(1, _translate("parseANNT", "Partial"))
self.label_2.setText(_translate("parseANNT", "Organism:"))
self.lineEdit.setPlaceholderText(
_translate("parseANNT", "H**o sapiens"))
self.label_3.setText(_translate("parseANNT", "Strain:"))
self.label_7.setText(_translate("parseANNT", "Isolate:"))
self.label_8.setText(_translate("parseANNT", "Synonym:"))
self.label_12.setText(_translate("parseANNT", "Host:"))
self.label_13.setText(_translate("parseANNT", "Country:"))
self.label_11.setText(_translate("parseANNT", "Release Date:"))
self.dateEdit.setDisplayFormat(_translate("parseANNT", "yyyy/M/d"))
self.label_9.setText(_translate("parseANNT", "Others:"))
self.label_10.setText(_translate("parseANNT", "Lineage:"))
self.lineEdit_6.setToolTip(
_translate("parseANNT",
"e.g. Hominoidea; Hominidae; Homininae; H**o"))
self.lineEdit_6.setPlaceholderText(
_translate("parseANNT", "Hominoidea; Hominidae; Homininae; H**o"))
self.groupBox_3.setTitle(_translate("parseANNT", "Run"))
self.pushButton.setText(_translate("parseANNT", "Start"))
self.pushButton_2.setText(_translate("parseANNT", "Cancel"))
self.groupBox_2.setTitle(_translate("parseANNT", "Progress"))
class Ui_ExtractSettings(object):
def setupUi(self, ExtractSettings):
ExtractSettings.setObjectName("ExtractSettings")
ExtractSettings.resize(725, 682)
self.gridLayout = QtWidgets.QGridLayout(ExtractSettings)
self.gridLayout.setContentsMargins(3, 3, 3, 3)
self.gridLayout.setSpacing(2)
self.gridLayout.setObjectName("gridLayout")
self.verticalLayout_3 = QtWidgets.QVBoxLayout()
self.verticalLayout_3.setSpacing(0)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.widget_container = QtWidgets.QWidget(ExtractSettings)
self.widget_container.setObjectName("widget_container")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.widget_container)
self.horizontalLayout_2.setContentsMargins(0, 0, 0, 0)
self.horizontalLayout_2.setSpacing(2)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label = QtWidgets.QLabel(self.widget_container)
self.label.setObjectName("label")
self.horizontalLayout_2.addWidget(self.label)
spacerItem = QtWidgets.QSpacerItem(36, 17,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem)
self.checkBox_2 = QtWidgets.QCheckBox(self.widget_container)
self.checkBox_2.setMinimumSize(QtCore.QSize(50, 0))
self.checkBox_2.setObjectName("checkBox_2")
self.horizontalLayout_2.addWidget(self.checkBox_2)
spacerItem1 = QtWidgets.QSpacerItem(37, 17,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem1)
self.toolButton = QtWidgets.QToolButton(self.widget_container)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/add-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton.setIcon(icon)
self.toolButton.setAutoRaise(True)
self.toolButton.setObjectName("toolButton")
self.horizontalLayout_2.addWidget(self.toolButton)
self.verticalLayout_3.addWidget(self.widget_container)
self.listWidget = AdvanceQlistwidget(ExtractSettings)
self.listWidget.setStyleSheet("QToolTip {\n"
" color: black; \n"
" background-color: #FFFFFF;\n"
" border: 1px solid white;\n"
" min-height: 20px;\n"
"}")
self.listWidget.setObjectName("listWidget")
self.verticalLayout_3.addWidget(self.listWidget)
self.gridLayout.addLayout(self.verticalLayout_3, 0, 0, 1, 1)
self.verticalLayout = QtWidgets.QVBoxLayout()
self.verticalLayout.setSpacing(0)
self.verticalLayout.setObjectName("verticalLayout")
self.widget_container3 = QtWidgets.QWidget(ExtractSettings)
self.widget_container3.setObjectName("widget_container3")
self.horizontalLayout = QtWidgets.QHBoxLayout(self.widget_container3)
self.horizontalLayout.setContentsMargins(0, 0, 0, 0)
self.horizontalLayout.setSpacing(0)
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_2 = QtWidgets.QLabel(self.widget_container3)
self.label_2.setStatusTip("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
spacerItem2 = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem2)
self.checkBox = QtWidgets.QCheckBox(self.widget_container3)
self.checkBox.setObjectName("checkBox")
self.horizontalLayout.addWidget(self.checkBox)
self.toolButton_6 = QtWidgets.QToolButton(self.widget_container3)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/import.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_6.setIcon(icon1)
self.toolButton_6.setAutoRaise(True)
self.toolButton_6.setObjectName("toolButton_6")
self.horizontalLayout.addWidget(self.toolButton_6)
self.toolButton_5 = QtWidgets.QToolButton(self.widget_container3)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/up.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_5.setIcon(icon2)
self.toolButton_5.setAutoRaise(True)
self.toolButton_5.setObjectName("toolButton_5")
self.horizontalLayout.addWidget(self.toolButton_5)
self.toolButton_3 = QtWidgets.QToolButton(self.widget_container3)
self.toolButton_3.setIcon(icon)
self.toolButton_3.setAutoRaise(True)
self.toolButton_3.setObjectName("toolButton_3")
self.horizontalLayout.addWidget(self.toolButton_3)
self.toolButton_4 = QtWidgets.QToolButton(self.widget_container3)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_4.setIcon(icon3)
self.toolButton_4.setAutoRaise(True)
self.toolButton_4.setObjectName("toolButton_4")
self.horizontalLayout.addWidget(self.toolButton_4)
self.verticalLayout.addWidget(self.widget_container3)
self.tableView = QtWidgets.QTableView(ExtractSettings)
self.tableView.setAcceptDrops(True)
self.tableView.setStyleSheet("QToolTip {\n"
" color: black; \n"
" background-color: #FFFFFF;\n"
" border: 1px solid white;\n"
" min-height: 20px;\n"
"}")
self.tableView.setTabKeyNavigation(True)
self.tableView.setDragEnabled(True)
self.tableView.setDragDropOverwriteMode(False)
self.tableView.setDragDropMode(
QtWidgets.QAbstractItemView.InternalMove)
self.tableView.setDefaultDropAction(QtCore.Qt.MoveAction)
self.tableView.setAlternatingRowColors(True)
self.tableView.setSelectionMode(
QtWidgets.QAbstractItemView.ExtendedSelection)
self.tableView.setSelectionBehavior(
QtWidgets.QAbstractItemView.SelectRows)
self.tableView.setObjectName("tableView")
self.verticalLayout.addWidget(self.tableView)
self.gridLayout.addLayout(self.verticalLayout, 0, 1, 2, 1)
self.verticalLayout_2 = QtWidgets.QVBoxLayout()
self.verticalLayout_2.setSpacing(0)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.widget_container2 = QtWidgets.QWidget(ExtractSettings)
self.widget_container2.setObjectName("widget_container2")
self.horizontalLayout_3 = QtWidgets.QHBoxLayout(self.widget_container2)
self.horizontalLayout_3.setContentsMargins(3, 0, 0, 0)
self.horizontalLayout_3.setSpacing(0)
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label_3 = QtWidgets.QLabel(self.widget_container2)
self.label_3.setObjectName("label_3")
self.horizontalLayout_3.addWidget(self.label_3)
spacerItem3 = QtWidgets.QSpacerItem(58, 17,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_3.addItem(spacerItem3)
self.toolButton_2 = QtWidgets.QToolButton(self.widget_container2)
self.toolButton_2.setIcon(icon)
self.toolButton_2.setAutoRaise(True)
self.toolButton_2.setObjectName("toolButton_2")
self.horizontalLayout_3.addWidget(self.toolButton_2)
self.verticalLayout_2.addWidget(self.widget_container2)
self.listWidget_2 = AdvanceQlistwidget(ExtractSettings)
self.listWidget_2.setStyleSheet("QToolTip {\n"
" color: black; \n"
" background-color: #FFFFFF;\n"
" border: 1px solid white;\n"
" min-height: 20px;\n"
"}")
self.listWidget_2.setProperty("showDropIndicator", True)
self.listWidget_2.setDragEnabled(True)
self.listWidget_2.setDragDropMode(
QtWidgets.QAbstractItemView.InternalMove)
self.listWidget_2.setDefaultDropAction(QtCore.Qt.MoveAction)
self.listWidget_2.setObjectName("listWidget_2")
self.verticalLayout_2.addWidget(self.listWidget_2)
self.gridLayout.addLayout(self.verticalLayout_2, 1, 0, 1, 1)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.checkBox_3 = QtWidgets.QCheckBox(ExtractSettings)
self.checkBox_3.setChecked(True)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout_5.addWidget(self.checkBox_3)
self.spinBox = QtWidgets.QSpinBox(ExtractSettings)
self.spinBox.setMaximum(999999999)
self.spinBox.setSingleStep(10)
self.spinBox.setProperty("value", 200)
self.spinBox.setDisplayIntegerBase(10)
self.spinBox.setObjectName("spinBox")
self.horizontalLayout_5.addWidget(self.spinBox)
self.checkBox_4 = QtWidgets.QCheckBox(ExtractSettings)
self.checkBox_4.setChecked(True)
self.checkBox_4.setObjectName("checkBox_4")
self.horizontalLayout_5.addWidget(self.checkBox_4)
self.spinBox_2 = QtWidgets.QSpinBox(ExtractSettings)
self.spinBox_2.setMinimum(1)
self.spinBox_2.setMaximum(999999999)
self.spinBox_2.setSingleStep(10)
self.spinBox_2.setProperty("value", 1)
self.spinBox_2.setDisplayIntegerBase(10)
self.spinBox_2.setObjectName("spinBox_2")
self.horizontalLayout_5.addWidget(self.spinBox_2)
self.gridLayout.addLayout(self.horizontalLayout_5, 2, 0, 1, 2)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.pushButton_14 = QtWidgets.QPushButton(ExtractSettings)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_14.sizePolicy().hasHeightForWidth())
self.pushButton_14.setSizePolicy(sizePolicy)
icon4 = QtGui.QIcon()
icon4.addPixmap(
QtGui.QPixmap(
":/picture/resourses/version-control-icon_88399.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_14.setIcon(icon4)
self.pushButton_14.setObjectName("pushButton_14")
self.horizontalLayout_4.addWidget(self.pushButton_14)
self.pushButton_13 = QtWidgets.QPushButton(ExtractSettings)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_13.sizePolicy().hasHeightForWidth())
self.pushButton_13.setSizePolicy(sizePolicy)
icon5 = QtGui.QIcon()
icon5.addPixmap(QtGui.QPixmap(":/picture/resourses/refresh-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_13.setIcon(icon5)
self.pushButton_13.setObjectName("pushButton_13")
self.horizontalLayout_4.addWidget(self.pushButton_13)
self.label_6 = ClickedLableGif(ExtractSettings)
self.label_6.setText("")
self.label_6.setObjectName("label_6")
self.horizontalLayout_4.addWidget(self.label_6)
self.gridLayout.addLayout(self.horizontalLayout_4, 3, 0, 1, 2)
self.retranslateUi(ExtractSettings)
self.checkBox_2.toggled['bool'].connect(self.listWidget.setDisabled)
self.checkBox_2.toggled['bool'].connect(self.toolButton.setDisabled)
self.checkBox_3.toggled['bool'].connect(self.spinBox.setEnabled)
self.checkBox_4.toggled['bool'].connect(self.spinBox_2.setEnabled)
QtCore.QMetaObject.connectSlotsByName(ExtractSettings)
def retranslateUi(self, ExtractSettings):
_translate = QtCore.QCoreApplication.translate
ExtractSettings.setWindowTitle(
_translate("ExtractSettings", "GenBank File Extract Settings"))
self.label.setText(
_translate("ExtractSettings", "Features to be extracted:"))
self.checkBox_2.setToolTip(
_translate("ExtractSettings", "Extract all features"))
self.checkBox_2.setText(_translate("ExtractSettings", "All"))
self.toolButton.setToolTip(_translate("ExtractSettings", "Add"))
self.toolButton.setText(_translate("ExtractSettings", "..."))
self.listWidget.setToolTip(
_translate(
"ExtractSettings", "<html>\n"
"<head>\n"
"<meta http-equiv=content-type content=text/html;charset=ISO-8859-1>\n"
"</head>\n"
"<body>\n"
"<div>\n"
"<font face=\"Courier New\">\n"
"<span style=\'font-weight:600; color:purple;\'>For Example:</span><br>\n"
" <span style=\'font-weight:600; color:#ff0000;\'>CDS</span> 2058..3272<br> /gene=\"nad4\"<br> /codon_start=1<br> /transl_table=9<br> /product=\"NADH dehydrogenase subunit 4\"<br> /protein_id=\"YP_009442302.1\"<br> <span style=\'font-weight:600; color:#ff0000;\'>tRNA</span> 3274..3336<br> /product=\"Q\"<br> <span style=\'font-weight:600; color:#ff0000;\'>rRNA</span> 8524..9472<br> /product=\"rrnL\"<br>\n"
"</font>\n"
"</div>\n"
"</body>\n"
"</html>"))
self.label_2.setToolTip(
_translate("ExtractSettings",
"Values corresponding to specific qualifiers"))
self.label_2.setText(
_translate("ExtractSettings", "Names unification:"))
self.checkBox.setText(
_translate("ExtractSettings", "Only extract these genes"))
self.toolButton_6.setToolTip(
_translate("ExtractSettings", "Import Table (.csv)"))
self.toolButton_6.setText(_translate("ExtractSettings", "..."))
self.toolButton_5.setToolTip(
_translate("ExtractSettings", "Export Table"))
self.toolButton_5.setText(_translate("ExtractSettings", "..."))
self.toolButton_3.setToolTip(_translate("ExtractSettings", "Add"))
self.toolButton_3.setText(_translate("ExtractSettings", "..."))
self.toolButton_4.setToolTip(_translate("ExtractSettings", "Delete"))
self.toolButton_4.setText(_translate("ExtractSettings", "..."))
self.tableView.setToolTip(
_translate(
"ExtractSettings", "<html>\n"
"<head>\n"
"<meta http-equiv=content-type content=text/html;charset=ISO-8859-1>\n"
"</head>\n"
"<body>\n"
"<div>\n"
"<font face=\"Courier New\">\n"
"<span style=\'font-weight:600; color:purple;\'>For Example:</span><br>\n"
" CDS 2058..3272\n"
" /gene=\"<span style=\'font-weight:600; color:#ff0000;\'>nad4</span>\"\n"
" /codon_start=1\n"
" /transl_table=9\n"
" /product=\"<span style=\'font-weight:600; color:#ff0000;\'>NADH dehydrogenase subunit 4</span>\"\n"
" /protein_id=\"YP_009442302.1\"\n"
" tRNA 3274..3336\n"
" /product=\"<span style=\'font-weight:600; color:#ff0000;\'>Q</span>\"\n"
" rRNA 8524..9472\n"
" /product=\"<span style=\'font-weight:600; color:#ff0000;\'>rrnL</span>\"\n"
"</font>\n"
"</div>\n"
"</body>\n"
"</html>"))
self.label_3.setText(
_translate("ExtractSettings", "Qualifiers to be recognized:"))
self.toolButton_2.setToolTip(_translate("ExtractSettings", "Add"))
self.toolButton_2.setText(_translate("ExtractSettings", "..."))
self.listWidget_2.setToolTip(
_translate(
"ExtractSettings", "<html>\n"
"<head>\n"
"<meta http-equiv=content-type content=text/html;charset=ISO-8859-1>\n"
"</head>\n"
"<body>\n"
"<div>\n"
"<font face=\"Courier New\">\n"
"<span style=\'font-weight:600; color:purple;\'>For Example:</span><br>\n"
" CDS 2058..3272\n"
" /<span style=\'font-weight:600; color:#ff0000;\'>gene</span>=\"nad4\"\n"
" /codon_start=1\n"
" /transl_table=9\n"
" /<span style=\'font-weight:600; color:#ff0000;\'>product</span>=\"NADH dehydrogenase subunit 4\"\n"
" /protein_id=\"YP_009442302.1\"\n"
" tRNA 3274..3336\n"
" /<span style=\'font-weight:600; color:#ff0000;\'>product</span>=\"Q\"\n"
" rRNA 8524..9472\n"
" /<span style=\'font-weight:600; color:#ff0000;\'>product</span>=\"rrnL\"\n"
"</font>\n"
"</div>\n"
"</body>\n"
"</html>"))
self.checkBox_3.setText(
_translate("ExtractSettings",
"Extract intergenic regions (> ? bp):"))
self.checkBox_4.setText(
_translate("ExtractSettings",
"Extract overlapping regions (> ? bp):"))
self.pushButton_14.setText(_translate("ExtractSettings", "Version"))
self.pushButton_13.setText(
_translate("ExtractSettings", "import/export settings"))
self.label_6.setToolTip(_translate("ExtractSettings", "Brief example"))
class Ui_MrBayes(object):
def setupUi(self, MrBayes):
MrBayes.setObjectName("MrBayes")
MrBayes.resize(574, 636)
self.verticalLayout_3 = QtWidgets.QVBoxLayout(MrBayes)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.scrollArea = QtWidgets.QScrollArea(MrBayes)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, 0, 556, 618))
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(
self.scrollAreaWidgetContents)
self.verticalLayout_2.setContentsMargins(0, 0, 0, 0)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.groupBox_4 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout_2.addWidget(self.label_5, 0, 0, 1, 1)
self.lineEdit = InputQLineEdit(self.groupBox_4)
self.lineEdit.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit.setText("")
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout_2.addWidget(self.lineEdit, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_31 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_31.setFont(font)
self.label_31.setObjectName("label_31")
self.gridLayout_2.addWidget(self.label_31, 1, 0, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_3.setChecked(True)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout.addWidget(self.checkBox_3)
self.label_9 = ClickedLableGif(self.groupBox_4)
self.label_9.setText("")
self.label_9.setObjectName("label_9")
self.horizontalLayout.addWidget(self.label_9)
self.gridLayout_2.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.comboBox_5 = CheckableComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.gridLayout_2.addWidget(self.comboBox_5, 1, 1, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_4)
self.groupBox = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox.setToolTip("")
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout.addWidget(self.label_25, 0, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_7.setObjectName("comboBox_7")
self.gridLayout.addWidget(self.comboBox_7, 0, 1, 1, 1)
self.pushButton_partition = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_partition.sizePolicy().hasHeightForWidth())
self.pushButton_partition.setSizePolicy(sizePolicy)
self.pushButton_partition.setLayoutDirection(QtCore.Qt.LeftToRight)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/pie-chart.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_partition.setIcon(icon)
self.pushButton_partition.setCheckable(True)
self.pushButton_partition.setObjectName("pushButton_partition")
self.gridLayout.addWidget(self.pushButton_partition, 0, 2, 1, 1)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setObjectName("checkBox_4")
self.gridLayout.addWidget(self.checkBox_4, 1, 0, 1, 1)
self.comboBox_10 = QtWidgets.QComboBox(self.groupBox)
self.comboBox_10.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_10.sizePolicy().hasHeightForWidth())
self.comboBox_10.setSizePolicy(sizePolicy)
self.comboBox_10.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_10.setObjectName("comboBox_10")
self.gridLayout.addWidget(self.comboBox_10, 1, 1, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_28 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_28.setFont(font)
self.label_28.setObjectName("label_28")
self.horizontalLayout_2.addWidget(self.label_28)
self.spinBox = QtWidgets.QSpinBox(self.groupBox)
self.spinBox.setMinimum(2)
self.spinBox.setMaximum(64)
self.spinBox.setProperty("value", 4)
self.spinBox.setObjectName("spinBox")
self.horizontalLayout_2.addWidget(self.spinBox)
self.gridLayout.addLayout(self.horizontalLayout_2, 1, 2, 1, 1)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout.addWidget(self.label_26, 2, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout.addWidget(self.comboBox_4, 2, 1, 1, 2)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setObjectName("label_27")
self.gridLayout.addWidget(self.label_27, 3, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.gridLayout.addWidget(self.comboBox_6, 3, 1, 1, 2)
self.verticalLayout_2.addWidget(self.groupBox)
self.groupBox_5 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_4.setObjectName("gridLayout_4")
self.label = QtWidgets.QLabel(self.groupBox_5)
self.label.setObjectName("label")
self.gridLayout_4.addWidget(self.label, 0, 0, 1, 2)
self.spinBox_2 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_2.sizePolicy().hasHeightForWidth())
self.spinBox_2.setSizePolicy(sizePolicy)
self.spinBox_2.setWrapping(True)
self.spinBox_2.setMinimum(1)
self.spinBox_2.setMaximum(999999999)
self.spinBox_2.setSingleStep(1)
self.spinBox_2.setProperty("value", 2000000)
self.spinBox_2.setObjectName("spinBox_2")
self.gridLayout_4.addWidget(self.spinBox_2, 0, 2, 1, 1)
self.label_2 = QtWidgets.QLabel(self.groupBox_5)
self.label_2.setObjectName("label_2")
self.gridLayout_4.addWidget(self.label_2, 0, 3, 1, 1)
self.spinBox_6 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_6.sizePolicy().hasHeightForWidth())
self.spinBox_6.setSizePolicy(sizePolicy)
self.spinBox_6.setMinimum(1)
self.spinBox_6.setMaximum(99999999)
self.spinBox_6.setProperty("value", 100)
self.spinBox_6.setObjectName("spinBox_6")
self.gridLayout_4.addWidget(self.spinBox_6, 0, 5, 1, 1)
self.label_3 = QtWidgets.QLabel(self.groupBox_5)
self.label_3.setObjectName("label_3")
self.gridLayout_4.addWidget(self.label_3, 1, 0, 1, 2)
self.spinBox_7 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_7.sizePolicy().hasHeightForWidth())
self.spinBox_7.setSizePolicy(sizePolicy)
self.spinBox_7.setWrapping(True)
self.spinBox_7.setMinimum(1)
self.spinBox_7.setMaximum(9999)
self.spinBox_7.setSingleStep(1)
self.spinBox_7.setProperty("value", 2)
self.spinBox_7.setObjectName("spinBox_7")
self.gridLayout_4.addWidget(self.spinBox_7, 1, 2, 1, 1)
self.label_4 = QtWidgets.QLabel(self.groupBox_5)
self.label_4.setObjectName("label_4")
self.gridLayout_4.addWidget(self.label_4, 1, 3, 1, 2)
self.spinBox_8 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_8.sizePolicy().hasHeightForWidth())
self.spinBox_8.setSizePolicy(sizePolicy)
self.spinBox_8.setWrapping(True)
self.spinBox_8.setMinimum(1)
self.spinBox_8.setMaximum(9999)
self.spinBox_8.setSingleStep(1)
self.spinBox_8.setProperty("value", 4)
self.spinBox_8.setObjectName("spinBox_8")
self.gridLayout_4.addWidget(self.spinBox_8, 1, 5, 1, 1)
self.checkBox = QtWidgets.QCheckBox(self.groupBox_5)
self.checkBox.setChecked(True)
self.checkBox.setObjectName("checkBox")
self.buttonGroup = QtWidgets.QButtonGroup(MrBayes)
self.buttonGroup.setObjectName("buttonGroup")
self.buttonGroup.addButton(self.checkBox)
self.gridLayout_4.addWidget(self.checkBox, 2, 0, 1, 2)
self.doubleSpinBox_2 = QtWidgets.QDoubleSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.doubleSpinBox_2.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_2.setSizePolicy(sizePolicy)
self.doubleSpinBox_2.setMaximum(1.0)
self.doubleSpinBox_2.setSingleStep(0.01)
self.doubleSpinBox_2.setProperty("value", 0.25)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.gridLayout_4.addWidget(self.doubleSpinBox_2, 2, 2, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_5)
self.checkBox_2.setObjectName("checkBox_2")
self.buttonGroup.addButton(self.checkBox_2)
self.gridLayout_4.addWidget(self.checkBox_2, 2, 3, 1, 1)
self.spinBox_10 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_10.sizePolicy().hasHeightForWidth())
self.spinBox_10.setSizePolicy(sizePolicy)
self.spinBox_10.setWrapping(True)
self.spinBox_10.setMinimum(1)
self.spinBox_10.setMaximum(999999999)
self.spinBox_10.setSingleStep(1)
self.spinBox_10.setProperty("value", 250)
self.spinBox_10.setObjectName("spinBox_10")
self.gridLayout_4.addWidget(self.spinBox_10, 2, 5, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox_5)
self.label_6.setObjectName("label_6")
self.gridLayout_4.addWidget(self.label_6, 3, 0, 1, 1)
self.label_7 = QtWidgets.QLabel(self.groupBox_5)
self.label_7.setObjectName("label_7")
self.gridLayout_4.addWidget(self.label_7, 3, 3, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_4.addWidget(self.comboBox_8, 3, 2, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_4.addWidget(self.comboBox_9, 3, 5, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_5)
self.groupBox_3 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
self.pushButton.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setAutoExclusive(False)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(
":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"
), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon2)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.gridLayout_3.addWidget(self.pushButton_continue, 0, 1, 1, 1)
self.pushButton_10 = QtWidgets.QPushButton(self.groupBox_3)
icon3 = QtGui.QIcon()
icon3.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_10.setIcon(icon3)
self.pushButton_10.setObjectName("pushButton_10")
self.gridLayout_3.addWidget(self.pushButton_10, 1, 0, 1, 1)
self.pushButton_2 = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon4 = QtGui.QIcon()
icon4.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon4)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 1, 1, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_6.setObjectName("groupBox_6")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox_6)
self.verticalLayout.setObjectName("verticalLayout")
self.label_8 = QtWidgets.QLabel(self.groupBox_6)
self.label_8.setObjectName("label_8")
self.verticalLayout.addWidget(self.label_8)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.verticalLayout.addWidget(self.progressBar)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.verticalLayout.addWidget(self.pushButton_9)
self.verticalLayout_2.addWidget(self.groupBox_6)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.verticalLayout_3.addWidget(self.scrollArea)
self.retranslateUi(MrBayes)
self.pushButton_partition.toggled['bool'].connect(
self.comboBox_7.setDisabled)
self.checkBox_4.toggled['bool'].connect(self.comboBox_10.setEnabled)
QtCore.QMetaObject.connectSlotsByName(MrBayes)
MrBayes.setTabOrder(self.pushButton_3, self.pushButton_9)
MrBayes.setTabOrder(self.pushButton_9, self.lineEdit)
MrBayes.setTabOrder(self.lineEdit, self.pushButton_2)
MrBayes.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, MrBayes):
_translate = QtCore.QCoreApplication.translate
MrBayes.setWindowTitle(_translate("MrBayes", "MrBayes"))
self.groupBox_4.setTitle(_translate("MrBayes", "Input"))
self.label_5.setText(_translate("MrBayes", "Alignment File:"))
self.lineEdit.setPlaceholderText(
_translate("MrBayes", "The file should be NEXUS format"))
self.label_31.setText(_translate("MrBayes", "Outgroup(s):"))
self.label_14.setText(
_translate(
"MrBayes",
"<html><head/><body><p>Click <a href=\"http://mrbayes.sourceforge.net/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">MrBayes</span></p></body></html>"
))
self.checkBox_3.setText(_translate("MrBayes", "Save Log"))
self.label_9.setToolTip(_translate("MrBayes", "Brief example"))
self.groupBox.setTitle(_translate("MrBayes", "Parameters"))
self.label_25.setText(_translate("MrBayes", "Models:"))
self.pushButton_partition.setText(
_translate("MrBayes", "Partition Models"))
self.checkBox_4.setText(_translate("MrBayes", "Threads:"))
self.label_28.setText(_translate("MrBayes", "Gamma categories:"))
self.label_26.setText(_translate("MrBayes", "State freq:"))
self.comboBox_4.setItemText(
0, _translate("MrBayes", "dirichlet(1.0,1.0,1.0,1.0)"))
self.comboBox_4.setItemText(1, _translate("MrBayes", "fixed(equal)"))
self.comboBox_4.setItemText(2, _translate("MrBayes",
"fixed(empirical)"))
self.label_27.setToolTip(_translate("MrBayes", "Rate Variation"))
self.label_27.setText(_translate("MrBayes", "Rate Var.:"))
self.comboBox_6.setItemText(
0, _translate("MrBayes", "equal (No rate variation across sites)"))
self.comboBox_6.setItemText(
1, _translate("MrBayes",
"gamma (+G, Gamma-distributed variation)"))
self.comboBox_6.setItemText(
2, _translate("MrBayes",
"lnorm (Log Normal-distributed variation)"))
self.comboBox_6.setItemText(
3,
_translate("MrBayes",
"propinv (+I, Proportion of sites invariable)"))
self.comboBox_6.setItemText(
4,
_translate(
"MrBayes",
"invgamma (+I+G, Proportion invariable, remaining gamma)"))
self.comboBox_6.setItemText(
5, _translate("MrBayes", "adgamma (Autocorrelated variation)"))
self.groupBox_5.setTitle(_translate("MrBayes", "MCMC Settings"))
self.label.setText(_translate("MrBayes", "Generations:"))
self.label_2.setText(_translate("MrBayes", "Sampling Freq:"))
self.label_3.setText(_translate("MrBayes", "Number of Runs:"))
self.label_4.setText(_translate("MrBayes", "Number of Chains:"))
self.checkBox.setText(_translate("MrBayes", "Burnin Fraction:"))
self.checkBox_2.setText(_translate("MrBayes", "Burnin:"))
self.label_6.setToolTip(_translate("MrBayes",
"Type of consensus tree"))
self.label_6.setText(_translate("MrBayes", "Contype:"))
self.label_7.setToolTip(
_translate("MrBayes", "Format of consensus tree"))
self.label_7.setText(_translate("MrBayes", "Conformat:"))
self.comboBox_8.setItemText(0, _translate("MrBayes", "Halfcompat"))
self.comboBox_8.setItemText(1, _translate("MrBayes", "Allcompat"))
self.comboBox_9.setItemText(0, _translate("MrBayes", "Simple"))
self.comboBox_9.setItemText(1, _translate("MrBayes", "Figtree"))
self.groupBox_3.setTitle(_translate("MrBayes", "Run"))
self.pushButton.setText(_translate("MrBayes", "Start"))
self.pushButton_continue.setText(
_translate("MrBayes", "Continue Previous Analysis"))
self.pushButton_10.setText(
_translate("MrBayes", "Show MrBayes Data Block"))
self.pushButton_2.setText(_translate("MrBayes", "Stop"))
self.groupBox_6.setTitle(_translate("MrBayes", "Progress"))
self.label_8.setText(_translate("MrBayes", "Bayesian inference"))
self.pushButton_9.setText(_translate("MrBayes", "Show log"))
class Ui_PF2ExePath(object):
def setupUi(self, PF2ExePath):
PF2ExePath.setObjectName("PF2ExePath")
PF2ExePath.resize(550, 539)
PF2ExePath.setMinimumSize(QtCore.QSize(550, 0))
PF2ExePath.setMaximumSize(QtCore.QSize(16777215, 16777215))
self.verticalLayout_4 = QtWidgets.QVBoxLayout(PF2ExePath)
self.verticalLayout_4.setObjectName("verticalLayout_4")
self.groupBox_5 = QtWidgets.QGroupBox(PF2ExePath)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_4.setHorizontalSpacing(2)
self.gridLayout_4.setObjectName("gridLayout_4")
self.label_16 = QtWidgets.QLabel(self.groupBox_5)
self.label_16.setWordWrap(True)
self.label_16.setObjectName("label_16")
self.gridLayout_4.addWidget(self.label_16, 0, 0, 1, 3)
self.label_17 = QtWidgets.QLabel(self.groupBox_5)
self.label_17.setObjectName("label_17")
self.gridLayout_4.addWidget(self.label_17, 1, 0, 1, 1)
self.lineEdit_3 = QtWidgets.QLineEdit(self.groupBox_5)
self.lineEdit_3.setDragEnabled(True)
self.lineEdit_3.setReadOnly(True)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_4.addWidget(self.lineEdit_3, 1, 1, 1, 1)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_5)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_ok.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon)
self.pushButton_9.setObjectName("pushButton_9")
self.horizontalLayout_3.addWidget(self.pushButton_9)
self.pushButton_10 = QtWidgets.QPushButton(self.groupBox_5)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_close.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_10.setIcon(icon1)
self.pushButton_10.setObjectName("pushButton_10")
self.horizontalLayout_3.addWidget(self.pushButton_10)
self.gridLayout_4.addLayout(self.horizontalLayout_3, 2, 0, 1, 3)
self.toolButton_5 = QtWidgets.QToolButton(self.groupBox_5)
self.toolButton_5.setStyleSheet("")
self.toolButton_5.setText("")
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/Open_folder_add_512px_1186192_easyicon.net.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_5.setIcon(icon2)
self.toolButton_5.setIconSize(QtCore.QSize(30, 30))
self.toolButton_5.setCheckable(False)
self.toolButton_5.setChecked(False)
self.toolButton_5.setAutoRaise(True)
self.toolButton_5.setObjectName("toolButton_5")
self.gridLayout_4.addWidget(self.toolButton_5, 1, 2, 1, 1)
self.verticalLayout_4.addWidget(self.groupBox_5)
self.label_14 = QtWidgets.QLabel(PF2ExePath)
self.label_14.setWordWrap(True)
self.label_14.setObjectName("label_14")
self.verticalLayout_4.addWidget(self.label_14)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_10 = QtWidgets.QLabel(PF2ExePath)
self.label_10.setObjectName("label_10")
self.horizontalLayout.addWidget(self.label_10)
self.comboBox = QtWidgets.QComboBox(PF2ExePath)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.comboBox.addItem("")
self.horizontalLayout.addWidget(self.comboBox)
self.verticalLayout_4.addLayout(self.horizontalLayout)
self.groupBox_2 = QtWidgets.QGroupBox(PF2ExePath)
self.groupBox_2.setCheckable(True)
self.groupBox_2.setObjectName("groupBox_2")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox_2)
self.verticalLayout.setObjectName("verticalLayout")
self.pushButton_6 = QtWidgets.QPushButton(self.groupBox_2)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/Install.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_6.setIcon(icon3)
self.pushButton_6.setObjectName("pushButton_6")
self.verticalLayout.addWidget(self.pushButton_6)
self.label_7 = QtWidgets.QLabel(self.groupBox_2)
self.label_7.setWordWrap(True)
self.label_7.setOpenExternalLinks(True)
self.label_7.setObjectName("label_7")
self.verticalLayout.addWidget(self.label_7)
self.label_18 = QtWidgets.QLabel(self.groupBox_2)
self.label_18.setWordWrap(True)
self.label_18.setObjectName("label_18")
self.verticalLayout.addWidget(self.label_18)
self.verticalLayout_4.addWidget(self.groupBox_2)
self.groupBox_3 = QtWidgets.QGroupBox(PF2ExePath)
self.groupBox_3.setCheckable(True)
self.groupBox_3.setChecked(False)
self.groupBox_3.setObjectName("groupBox_3")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.groupBox_3)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.groupBox_4 = QtWidgets.QGroupBox(self.groupBox_3)
self.groupBox_4.setObjectName("groupBox_4")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox_4)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.pushButton_8 = QtWidgets.QPushButton(self.groupBox_4)
self.pushButton_8.setIcon(icon3)
self.pushButton_8.setObjectName("pushButton_8")
self.verticalLayout_2.addWidget(self.pushButton_8)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setWordWrap(True)
self.label_8.setOpenExternalLinks(True)
self.label_8.setObjectName("label_8")
self.verticalLayout_2.addWidget(self.label_8)
self.verticalLayout_3.addWidget(self.groupBox_4)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label_5 = QtWidgets.QLabel(self.groupBox_3)
self.label_5.setObjectName("label_5")
self.horizontalLayout_4.addWidget(self.label_5)
self.pushButton_11 = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_11.sizePolicy().hasHeightForWidth())
self.pushButton_11.setSizePolicy(sizePolicy)
self.pushButton_11.setObjectName("pushButton_11")
self.horizontalLayout_4.addWidget(self.pushButton_11)
self.verticalLayout_3.addLayout(self.horizontalLayout_4)
self.verticalLayout_4.addWidget(self.groupBox_3)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_6 = QtWidgets.QLabel(PF2ExePath)
self.label_6.setObjectName("label_6")
self.horizontalLayout_2.addWidget(self.label_6)
self.label_9 = ClickedLableGif(PF2ExePath)
self.label_9.setText("")
self.label_9.setObjectName("label_9")
self.horizontalLayout_2.addWidget(self.label_9)
spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_2.addItem(spacerItem)
self.verticalLayout_4.addLayout(self.horizontalLayout_2)
self.retranslateUi(PF2ExePath)
QtCore.QMetaObject.connectSlotsByName(PF2ExePath)
def retranslateUi(self, PF2ExePath):
_translate = QtCore.QCoreApplication.translate
PF2ExePath.setWindowTitle(_translate("PF2ExePath", "Specify excutable path"))
self.groupBox_5.setTitle(_translate("PF2ExePath", "Specify"))
self.label_16.setText(_translate("PF2ExePath", "<html><head/><body><p>If you have a PartitionFinder2 (python script or excutable file), please <span style=\" font-weight:600; color:#ff0000;\">specify (folder)</span>.</p></body></html>"))
self.label_17.setText(_translate("PF2ExePath", "PF2 Path:"))
self.lineEdit_3.setPlaceholderText(_translate("PF2ExePath", "C:\\R-3.4.4\\bin\\Rscript.exe"))
self.pushButton_9.setText(_translate("PF2ExePath", "Ok"))
self.pushButton_10.setText(_translate("PF2ExePath", "Cancel"))
self.label_14.setText(_translate("PF2ExePath", "<html><head/><body><p>If you don\'t have PartitionFinder2, please <span style=\" font-weight:600; color:#ff0000;\">download.</span> Please select one of the two ways to install PartitionFinder2 below:</p></body></html>"))
self.label_10.setText(_translate("PF2ExePath", "Downloading source:"))
self.comboBox.setItemText(0, _translate("PF2ExePath", "Github"))
self.comboBox.setItemText(1, _translate("PF2ExePath", "Gitlab"))
self.comboBox.setItemText(2, _translate("PF2ExePath", "Chinese resource"))
self.groupBox_2.setTitle(_translate("PF2ExePath", "Install compiled PartitionFinder2 (recommended)"))
self.pushButton_6.setText(_translate("PF2ExePath", "Download"))
self.label_7.setText(_translate("PF2ExePath", "<html><head/><body><p>If you fail to download this, click here to download it manually.</p></body></html>"))
self.label_18.setText(_translate("PF2ExePath", "This executable file was compiled by us, if it is not working, please select the option below."))
self.groupBox_3.setTitle(_translate("PF2ExePath", "Install python 2.7 and PartitionFinder2"))
self.groupBox_4.setTitle(_translate("PF2ExePath", "Download PartitionFinder2"))
self.pushButton_8.setText(_translate("PF2ExePath", "Download"))
self.label_8.setText(_translate("PF2ExePath", "<html><head/><body><p>If you fail to download this, click here to download it manually.</p></body></html>"))
self.label_5.setText(_translate("PF2ExePath", "python 2.7:"))
self.pushButton_11.setText(_translate("PF2ExePath", "Configure"))
self.label_6.setText(_translate("PF2ExePath", "Don\'t know how to configure? Please see"))
self.label_9.setToolTip(_translate("PF2ExePath", "Brief example"))
class Ui_ConverFMT(object):
def setupUi(self, ConverFMT):
ConverFMT.setObjectName("ConverFMT")
ConverFMT.resize(536, 362)
ConverFMT.setSizeGripEnabled(True)
self.gridLayout_4 = QtWidgets.QGridLayout(ConverFMT)
self.gridLayout_4.setObjectName("gridLayout_4")
self.groupBox_4 = QtWidgets.QGroupBox(ConverFMT)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_4 = QtWidgets.QLabel(self.groupBox_4)
self.label_4.setObjectName("label_4")
self.gridLayout_2.addWidget(self.label_4, 0, 0, 1, 1)
self.comboBox_4 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setAcceptDrops(True)
self.comboBox_4.setEditable(True)
self.comboBox_4.setSizeAdjustPolicy(
QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_4.setObjectName("comboBox_4")
self.gridLayout_2.addWidget(self.comboBox_4, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.horizontalLayout.addWidget(self.label_5)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.label_2 = ClickedLableGif(self.groupBox_4)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.gridLayout_2.addLayout(self.horizontalLayout, 1, 0, 1, 3)
self.gridLayout_4.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(ConverFMT)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setObjectName("checkBox")
self.gridLayout.addWidget(self.checkBox, 0, 0, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_5.setObjectName("checkBox_5")
self.gridLayout.addWidget(self.checkBox_5, 0, 1, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout.addWidget(self.checkBox_2, 1, 0, 1, 1)
self.checkBox_12 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_12.setObjectName("checkBox_12")
self.gridLayout.addWidget(self.checkBox_12, 1, 1, 1, 1)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout.addWidget(self.checkBox_3, 2, 0, 1, 1)
self.checkBox_9 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_9.setObjectName("checkBox_9")
self.gridLayout.addWidget(self.checkBox_9, 2, 1, 1, 1)
self.checkBox_13 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_13.setObjectName("checkBox_13")
self.gridLayout.addWidget(self.checkBox_13, 3, 0, 1, 1)
self.gridLayout_4.addWidget(self.groupBox, 1, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(ConverFMT)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon1)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_3.setColumnStretch(0, 1)
self.gridLayout_3.setColumnStretch(1, 1)
self.gridLayout_4.addWidget(self.groupBox_3, 2, 0, 1, 1)
self.groupBox_5 = QtWidgets.QGroupBox(ConverFMT)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_5.setObjectName("gridLayout_5")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_5)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_5.addWidget(self.progressBar, 0, 0, 1, 1)
self.gridLayout_4.addWidget(self.groupBox_5, 3, 0, 1, 1)
self.retranslateUi(ConverFMT)
QtCore.QMetaObject.connectSlotsByName(ConverFMT)
def retranslateUi(self, ConverFMT):
_translate = QtCore.QCoreApplication.translate
ConverFMT.setWindowTitle(
_translate("ConverFMT", "Convert Sequence format"))
self.groupBox_4.setTitle(_translate("ConverFMT", "Input"))
self.label_4.setText(_translate("ConverFMT", "Input:"))
self.label_5.setText(
_translate(
"ConverFMT",
"<html><head/><body><p>Try to drag your <span style=\" font-weight:600; color:#ff0000;\">alignments</span> file and drop here if you want to use custom files</p></body></html>"
))
self.label_2.setToolTip(_translate("ConverFMT", "Brief example"))
self.groupBox.setTitle(_translate("ConverFMT", "Parameter"))
self.checkBox.setText(_translate("ConverFMT", "Phylip Format"))
self.checkBox_5.setText(_translate("ConverFMT", "Paml Format"))
self.checkBox_2.setText(
_translate("ConverFMT", "Nexus Format (sequential)"))
self.checkBox_12.setText(_translate("ConverFMT", "Fasta Format"))
self.checkBox_3.setText(
_translate("ConverFMT", "Nexus Format (interleave)"))
self.checkBox_9.setText(
_translate("ConverFMT", "Sequence Statistics File"))
self.checkBox_13.setText(
_translate("ConverFMT", "Axt Format (for KaKs_Calculator2)"))
self.groupBox_3.setTitle(_translate("ConverFMT", "Run"))
self.pushButton.setText(_translate("ConverFMT", "Start"))
self.pushButton_2.setText(_translate("ConverFMT", "Stop"))
self.groupBox_5.setTitle(_translate("ConverFMT", "Progress"))
class Ui_RSCUfig(object):
def setupUi(self, RSCUfig):
RSCUfig.setObjectName("RSCUfig")
RSCUfig.resize(537, 597)
self.gridLayout_3 = QtWidgets.QGridLayout(RSCUfig)
self.gridLayout_3.setObjectName("gridLayout_3")
self.splitter = QtWidgets.QSplitter(RSCUfig)
self.splitter.setMidLineWidth(0)
self.splitter.setOrientation(QtCore.Qt.Vertical)
self.splitter.setHandleWidth(5)
self.splitter.setObjectName("splitter")
self.groupBox = QtWidgets.QGroupBox(self.splitter)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.listWidget_3 = QtWidgets.QListWidget(self.groupBox)
self.listWidget_3.setAcceptDrops(True)
self.listWidget_3.setEditTriggers(
QtWidgets.QAbstractItemView.AnyKeyPressed
| QtWidgets.QAbstractItemView.DoubleClicked
| QtWidgets.QAbstractItemView.EditKeyPressed)
self.listWidget_3.setDragEnabled(True)
self.listWidget_3.setDragDropMode(
QtWidgets.QAbstractItemView.InternalMove)
self.listWidget_3.setDefaultDropAction(QtCore.Qt.MoveAction)
self.listWidget_3.setSelectionMode(
QtWidgets.QAbstractItemView.ExtendedSelection)
self.listWidget_3.setViewMode(QtWidgets.QListView.ListMode)
self.listWidget_3.setObjectName("listWidget_3")
self.gridLayout.addWidget(self.listWidget_3, 0, 0, 1, 1)
self.verticalLayout_2 = QtWidgets.QVBoxLayout()
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 30))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 30))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.verticalLayout_2.addWidget(self.pushButton_3)
self.toolButton_T = QtWidgets.QToolButton(self.groupBox)
self.toolButton_T.setMinimumSize(QtCore.QSize(30, 30))
self.toolButton_T.setMaximumSize(QtCore.QSize(30, 30))
self.toolButton_T.setText("")
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_T.setIcon(icon)
self.toolButton_T.setIconSize(QtCore.QSize(26, 26))
self.toolButton_T.setAutoRaise(True)
self.toolButton_T.setObjectName("toolButton_T")
self.verticalLayout_2.addWidget(self.toolButton_T)
spacerItem = QtWidgets.QSpacerItem(20, 40,
QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
self.verticalLayout_2.addItem(spacerItem)
self.gridLayout.addLayout(self.verticalLayout_2, 0, 1, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_16 = QtWidgets.QLabel(self.groupBox)
self.label_16.setOpenExternalLinks(True)
self.label_16.setObjectName("label_16")
self.horizontalLayout.addWidget(self.label_16)
spacerItem1 = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem1)
self.label_3 = QtWidgets.QLabel(self.groupBox)
self.label_3.setObjectName("label_3")
self.horizontalLayout.addWidget(self.label_3)
self.label_2 = ClickedLableGif(self.groupBox)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.gridLayout.addLayout(self.horizontalLayout, 1, 0, 1, 2)
self.groupBox_2 = QtWidgets.QGroupBox(self.splitter)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_6 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_6.setObjectName("gridLayout_6")
self.verticalLayout_3 = QtWidgets.QVBoxLayout()
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.label_4 = QtWidgets.QLabel(self.groupBox_2)
self.label_4.setObjectName("label_4")
self.verticalLayout_3.addWidget(self.label_4)
self.listWidget_2 = QtWidgets.QListWidget(self.groupBox_2)
self.listWidget_2.setEditTriggers(
QtWidgets.QAbstractItemView.NoEditTriggers)
self.listWidget_2.setDragEnabled(True)
self.listWidget_2.setDragDropMode(
QtWidgets.QAbstractItemView.InternalMove)
self.listWidget_2.setDefaultDropAction(QtCore.Qt.MoveAction)
self.listWidget_2.setSelectionMode(
QtWidgets.QAbstractItemView.ExtendedSelection)
self.listWidget_2.setObjectName("listWidget_2")
self.verticalLayout_3.addWidget(self.listWidget_2)
self.gridLayout_6.addLayout(self.verticalLayout_3, 0, 0, 1, 1)
self.verticalLayout = QtWidgets.QVBoxLayout()
self.verticalLayout.setObjectName("verticalLayout")
self.label_6 = QtWidgets.QLabel(self.groupBox_2)
self.label_6.setObjectName("label_6")
self.verticalLayout.addWidget(self.label_6)
self.pushButton_color = QtWidgets.QPushButton(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_color.sizePolicy().hasHeightForWidth())
self.pushButton_color.setSizePolicy(sizePolicy)
self.pushButton_color.setAutoFillBackground(False)
self.pushButton_color.setStyleSheet("")
self.pushButton_color.setText("")
self.pushButton_color.setObjectName("pushButton_color")
self.verticalLayout.addWidget(self.pushButton_color)
self.pushButton_color_2 = QtWidgets.QPushButton(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_color_2.sizePolicy().hasHeightForWidth())
self.pushButton_color_2.setSizePolicy(sizePolicy)
self.pushButton_color_2.setAutoFillBackground(False)
self.pushButton_color_2.setStyleSheet("")
self.pushButton_color_2.setText("")
self.pushButton_color_2.setObjectName("pushButton_color_2")
self.verticalLayout.addWidget(self.pushButton_color_2)
self.pushButton_color_3 = QtWidgets.QPushButton(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_color_3.sizePolicy().hasHeightForWidth())
self.pushButton_color_3.setSizePolicy(sizePolicy)
self.pushButton_color_3.setAutoFillBackground(False)
self.pushButton_color_3.setStyleSheet("")
self.pushButton_color_3.setText("")
self.pushButton_color_3.setObjectName("pushButton_color_3")
self.verticalLayout.addWidget(self.pushButton_color_3)
self.pushButton_color_4 = QtWidgets.QPushButton(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Minimum,
QtWidgets.QSizePolicy.Expanding)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_color_4.sizePolicy().hasHeightForWidth())
self.pushButton_color_4.setSizePolicy(sizePolicy)
self.pushButton_color_4.setAutoFillBackground(False)
self.pushButton_color_4.setStyleSheet("")
self.pushButton_color_4.setText("")
self.pushButton_color_4.setObjectName("pushButton_color_4")
self.verticalLayout.addWidget(self.pushButton_color_4)
self.gridLayout_6.addLayout(self.verticalLayout, 0, 1, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_9 = QtWidgets.QLabel(self.groupBox_2)
self.label_9.setObjectName("label_9")
self.horizontalLayout_2.addWidget(self.label_9)
self.spinBox_5 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_5.sizePolicy().hasHeightForWidth())
self.spinBox_5.setSizePolicy(sizePolicy)
self.spinBox_5.setMinimum(1)
self.spinBox_5.setMaximum(999)
self.spinBox_5.setProperty("value", 9)
self.spinBox_5.setObjectName("spinBox_5")
self.horizontalLayout_2.addWidget(self.spinBox_5)
self.label_15 = QtWidgets.QLabel(self.groupBox_2)
self.label_15.setObjectName("label_15")
self.horizontalLayout_2.addWidget(self.label_15)
self.spinBox_6 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_6.sizePolicy().hasHeightForWidth())
self.spinBox_6.setSizePolicy(sizePolicy)
self.spinBox_6.setMinimum(1)
self.spinBox_6.setMaximum(999)
self.spinBox_6.setProperty("value", 8)
self.spinBox_6.setObjectName("spinBox_6")
self.horizontalLayout_2.addWidget(self.spinBox_6)
self.gridLayout_6.addLayout(self.horizontalLayout_2, 1, 0, 1, 2)
self.gridLayout_2 = QtWidgets.QGridLayout()
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_13 = QtWidgets.QLabel(self.groupBox_2)
self.label_13.setObjectName("label_13")
self.gridLayout_2.addWidget(self.label_13, 0, 0, 1, 2)
self.doubleSpinBox_2 = MyDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_2.setReadOnly(False)
self.doubleSpinBox_2.setDecimals(1)
self.doubleSpinBox_2.setSingleStep(0.1)
self.doubleSpinBox_2.setProperty("value", 2.0)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.gridLayout_2.addWidget(self.doubleSpinBox_2, 0, 2, 1, 1)
self.doubleSpinBox_3 = MyDoubleSpinBox(self.groupBox_2)
self.doubleSpinBox_3.setToolTip("")
self.doubleSpinBox_3.setReadOnly(False)
self.doubleSpinBox_3.setDecimals(1)
self.doubleSpinBox_3.setSingleStep(0.1)
self.doubleSpinBox_3.setProperty("value", 6.5)
self.doubleSpinBox_3.setObjectName("doubleSpinBox_3")
self.gridLayout_2.addWidget(self.doubleSpinBox_3, 1, 2, 1, 1)
self.label_14 = QtWidgets.QLabel(self.groupBox_2)
self.label_14.setObjectName("label_14")
self.gridLayout_2.addWidget(self.label_14, 1, 0, 1, 2)
self.gridLayout_6.addLayout(self.gridLayout_2, 2, 0, 1, 2)
self.gridLayout_3.addWidget(self.splitter, 0, 0, 1, 1)
self.groupBox_3 = QtWidgets.QGroupBox(RSCUfig)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_5.setObjectName("gridLayout_5")
self.pushButton = ArrowPushButton(self.groupBox_3)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.gridLayout_5.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_5.addWidget(self.pushButton_2, 0, 1, 1, 1)
self.gridLayout_5.setColumnStretch(0, 1)
self.gridLayout_5.setColumnStretch(1, 1)
self.gridLayout_3.addWidget(self.groupBox_3, 1, 0, 1, 1)
self.groupBox_5 = QtWidgets.QGroupBox(RSCUfig)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_4.setObjectName("gridLayout_4")
self.progressBar = QtWidgets.QProgressBar(self.groupBox_5)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_4.addWidget(self.progressBar, 0, 0, 1, 1)
self.gridLayout_3.addWidget(self.groupBox_5, 2, 0, 1, 1)
self.retranslateUi(RSCUfig)
QtCore.QMetaObject.connectSlotsByName(RSCUfig)
def retranslateUi(self, RSCUfig):
_translate = QtCore.QCoreApplication.translate
RSCUfig.setWindowTitle(_translate("RSCUfig", "Draw RSCU Figure"))
self.groupBox.setTitle(_translate("RSCUfig", "Input"))
self.listWidget_3.setToolTip(
_translate("RSCUfig", "Try to drag to reorder"))
self.toolButton_T.setShortcut(_translate("RSCUfig", "Del"))
self.label_16.setText(
_translate(
"RSCUfig",
"<html><head/><body><p>Try to drag <span style=\" font-weight:600; color:#ff0105;\">RSCU</span> tables (<span style=\" font-weight:600; color:#ff0000;\">_stack.csv</span>) and drop here</p></body></html>"
))
self.label_3.setText(_translate("RSCUfig", "Demo:"))
self.label_2.setToolTip(_translate("RSCUfig", "Brief example"))
self.groupBox_2.setTitle(_translate("RSCUfig", "Parameters"))
self.label_4.setText(_translate("RSCUfig", "Order on the x-axis:"))
self.listWidget_2.setToolTip(
_translate("RSCUfig", "Try to drag to reorder"))
self.label_6.setText(_translate("RSCUfig", "Color of stacks:"))
self.pushButton_color.setToolTip(
_translate("RSCUfig", "Click to change color"))
self.pushButton_color_2.setToolTip(
_translate("RSCUfig", "Click to change color"))
self.pushButton_color_3.setToolTip(
_translate("RSCUfig", "Click to change color"))
self.pushButton_color_4.setToolTip(
_translate("RSCUfig", "Click to change color"))
self.label_9.setText(_translate("RSCUfig", "Figure height:"))
self.label_15.setText(_translate("RSCUfig", "Figure width:"))
self.label_13.setText(
_translate("RSCUfig",
"Adjust height ratio of RSCU figure to bottom legend:"))
self.doubleSpinBox_2.setToolTip(
_translate("RSCUfig", "the input must be multiple of 0.5"))
self.label_14.setText(_translate("RSCUfig",
"Maximum value of y-axis:"))
self.groupBox_3.setTitle(_translate("RSCUfig", "Run"))
self.pushButton.setText(_translate("RSCUfig", "Start"))
self.pushButton_2.setText(_translate("RSCUfig", "Close"))
self.groupBox_5.setTitle(_translate("RSCUfig", "Progress"))
class Ui_SerhNCBI(object):
def setupUi(self, SerhNCBI):
SerhNCBI.setObjectName("SerhNCBI")
SerhNCBI.resize(761, 659)
self.centralwidget = QtWidgets.QWidget(SerhNCBI)
self.centralwidget.setObjectName("centralwidget")
self.gridLayout = QtWidgets.QGridLayout(self.centralwidget)
self.gridLayout.setObjectName("gridLayout")
self.lineEdit = SearchQLineEdit(self.centralwidget)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout.addWidget(self.lineEdit, 0, 0, 1, 1)
self.label_6 = ClickedLableGif(self.centralwidget)
self.label_6.setText("")
self.label_6.setObjectName("label_6")
self.gridLayout.addWidget(self.label_6, 0, 1, 1, 1)
self.horizontalLayout_6 = QtWidgets.QHBoxLayout()
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setSpacing(0)
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.label = QtWidgets.QLabel(self.centralwidget)
self.label.setObjectName("label")
self.horizontalLayout_3.addWidget(self.label)
self.lineEdit_2 = QtWidgets.QLineEdit(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.lineEdit_2.sizePolicy().hasHeightForWidth())
self.lineEdit_2.setSizePolicy(sizePolicy)
self.lineEdit_2.setMinimumSize(QtCore.QSize(150, 0))
self.lineEdit_2.setMaximumSize(QtCore.QSize(16777215, 16777215))
self.lineEdit_2.setObjectName("lineEdit_2")
self.horizontalLayout_3.addWidget(self.lineEdit_2)
self.toolButton = QtWidgets.QToolButton(self.centralwidget)
self.toolButton.setText("")
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/Question-mark.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton.setIcon(icon)
self.toolButton.setAutoRaise(True)
self.toolButton.setObjectName("toolButton")
self.horizontalLayout_3.addWidget(self.toolButton)
self.horizontalLayout_6.addLayout(self.horizontalLayout_3)
self.line = QtWidgets.QFrame(self.centralwidget)
self.line.setFrameShape(QtWidgets.QFrame.VLine)
self.line.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line.setObjectName("line")
self.horizontalLayout_6.addWidget(self.line)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_3 = QtWidgets.QLabel(self.centralwidget)
self.label_3.setObjectName("label_3")
self.horizontalLayout.addWidget(self.label_3)
self.spinBox = QtWidgets.QSpinBox(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox.sizePolicy().hasHeightForWidth())
self.spinBox.setSizePolicy(sizePolicy)
self.spinBox.setMaximum(999999999)
self.spinBox.setSingleStep(1)
self.spinBox.setProperty("value", 100)
self.spinBox.setObjectName("spinBox")
self.horizontalLayout.addWidget(self.spinBox)
self.label_4 = QtWidgets.QLabel(self.centralwidget)
self.label_4.setObjectName("label_4")
self.horizontalLayout.addWidget(self.label_4)
self.toolButton_2 = QtWidgets.QToolButton(self.centralwidget)
self.toolButton_2.setText("")
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/refresh-icon.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_2.setIcon(icon1)
self.toolButton_2.setAutoRaise(True)
self.toolButton_2.setObjectName("toolButton_2")
self.horizontalLayout.addWidget(self.toolButton_2)
self.horizontalLayout_6.addLayout(self.horizontalLayout)
self.gridLayout.addLayout(self.horizontalLayout_6, 1, 0, 1, 2)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label_5 = QtWidgets.QLabel(self.centralwidget)
self.label_5.setObjectName("label_5")
self.horizontalLayout_4.addWidget(self.label_5)
self.comboBox_2 = QtWidgets.QComboBox(self.centralwidget)
self.comboBox_2.setObjectName("comboBox_2")
self.comboBox_2.addItem("")
self.comboBox_2.addItem("")
self.horizontalLayout_4.addWidget(self.comboBox_2)
self.horizontalLayout_5.addLayout(self.horizontalLayout_4)
self.line_2 = QtWidgets.QFrame(self.centralwidget)
self.line_2.setFrameShape(QtWidgets.QFrame.VLine)
self.line_2.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_2.setObjectName("line_2")
self.horizontalLayout_5.addWidget(self.line_2)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setSpacing(0)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_2 = QtWidgets.QLabel(self.centralwidget)
self.label_2.setObjectName("label_2")
self.horizontalLayout_2.addWidget(self.label_2)
self.comboBox = QtWidgets.QComboBox(self.centralwidget)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.horizontalLayout_2.addWidget(self.comboBox)
self.toolButton_3 = QtWidgets.QToolButton(self.centralwidget)
self.toolButton_3.setText("")
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/download_2.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton_3.setIcon(icon2)
self.toolButton_3.setAutoRaise(True)
self.toolButton_3.setObjectName("toolButton_3")
self.horizontalLayout_2.addWidget(self.toolButton_3)
self.horizontalLayout_5.addLayout(self.horizontalLayout_2)
self.gridLayout.addLayout(self.horizontalLayout_5, 2, 0, 1, 2)
self.tableView = QtWidgets.QTableView(self.centralwidget)
self.tableView.setSelectionBehavior(
QtWidgets.QAbstractItemView.SelectRows)
self.tableView.setSortingEnabled(True)
self.tableView.setObjectName("tableView")
self.gridLayout.addWidget(self.tableView, 3, 0, 1, 2)
SerhNCBI.setCentralWidget(self.centralwidget)
self.statusbar = QtWidgets.QStatusBar(SerhNCBI)
self.statusbar.setObjectName("statusbar")
SerhNCBI.setStatusBar(self.statusbar)
self.retranslateUi(SerhNCBI)
QtCore.QMetaObject.connectSlotsByName(SerhNCBI)
def retranslateUi(self, SerhNCBI):
_translate = QtCore.QCoreApplication.translate
SerhNCBI.setWindowTitle(_translate("SerhNCBI", "Search in NCBI"))
self.lineEdit.setPlaceholderText(
_translate(
"SerhNCBI",
"Insecta[ORGN] AND (mitochondrion[TITL] OR mitochondrial[TITL]) AND 10000:50000[SLEN]"
))
self.label_6.setToolTip(_translate("SerhNCBI", "Brief example"))
self.label.setText(_translate("SerhNCBI", "Email:"))
self.lineEdit_2.setPlaceholderText(
_translate("SerhNCBI", "*****@*****.**"))
self.label_3.setText(_translate("SerhNCBI", "Display"))
self.label_4.setText(_translate("SerhNCBI", "items of ? (total)"))
self.toolButton_2.setToolTip(_translate("SerhNCBI", "Refresh"))
self.label_5.setText(_translate("SerhNCBI", "Databases:"))
self.comboBox_2.setItemText(0, _translate("SerhNCBI", "nucleotide"))
self.comboBox_2.setItemText(1, _translate("SerhNCBI", "protein"))
self.label_2.setText(
_translate("SerhNCBI", "Download all sequences to:"))
self.toolButton_3.setToolTip(_translate("SerhNCBI", "Download"))
class Ui_DisplaySettings(object):
def setupUi(self, DisplaySettings):
DisplaySettings.setObjectName("DisplaySettings")
DisplaySettings.resize(786, 529)
self.verticalLayout_2 = QtWidgets.QVBoxLayout(DisplaySettings)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.splitter = QtWidgets.QSplitter(DisplaySettings)
self.splitter.setOrientation(QtCore.Qt.Horizontal)
self.splitter.setObjectName("splitter")
self.layoutWidget = QtWidgets.QWidget(self.splitter)
self.layoutWidget.setObjectName("layoutWidget")
self.verticalLayout_3 = QtWidgets.QVBoxLayout(self.layoutWidget)
self.verticalLayout_3.setContentsMargins(0, 0, 0, 0)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.label = QtWidgets.QLabel(self.layoutWidget)
self.label.setObjectName("label")
self.verticalLayout_3.addWidget(self.label)
self.treeView = QtWidgets.QTreeView(self.layoutWidget)
self.treeView.setObjectName("treeView")
self.treeView.header().setVisible(False)
self.verticalLayout_3.addWidget(self.treeView)
self.widget = QtWidgets.QWidget(self.splitter)
self.widget.setObjectName("widget")
self.gridLayout = QtWidgets.QGridLayout(self.widget)
self.gridLayout.setContentsMargins(0, 0, 0, 0)
self.gridLayout.setObjectName("gridLayout")
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_2 = QtWidgets.QLabel(self.widget)
self.label_2.setStatusTip("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.widget)
self.label_3.setObjectName("label_3")
self.horizontalLayout.addWidget(self.label_3)
self.label_6 = ClickedLableGif(self.widget)
self.label_6.setText("")
self.label_6.setAlignment(QtCore.Qt.AlignCenter)
self.label_6.setObjectName("label_6")
self.horizontalLayout.addWidget(self.label_6)
self.gridLayout.addLayout(self.horizontalLayout, 0, 0, 1, 2)
self.listWidget = QtWidgets.QListWidget(self.widget)
self.listWidget.setAcceptDrops(True)
self.listWidget.setTabKeyNavigation(True)
self.listWidget.setDragEnabled(True)
self.listWidget.setDragDropOverwriteMode(False)
self.listWidget.setDragDropMode(QtWidgets.QAbstractItemView.InternalMove)
self.listWidget.setDefaultDropAction(QtCore.Qt.MoveAction)
self.listWidget.setAlternatingRowColors(True)
self.listWidget.setSelectionMode(QtWidgets.QAbstractItemView.ExtendedSelection)
self.listWidget.setSelectionRectVisible(False)
self.listWidget.setObjectName("listWidget")
self.gridLayout.addWidget(self.listWidget, 1, 0, 1, 1)
self.verticalLayout = QtWidgets.QVBoxLayout()
self.verticalLayout.setObjectName("verticalLayout")
self.pushButton_del = QtWidgets.QPushButton(self.widget)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/delete.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_del.setIcon(icon)
self.pushButton_del.setObjectName("pushButton_del")
self.verticalLayout.addWidget(self.pushButton_del)
spacerItem1 = QtWidgets.QSpacerItem(20, 40, QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Expanding)
self.verticalLayout.addItem(spacerItem1)
self.pushButton = QtWidgets.QPushButton(self.widget)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_ok.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setObjectName("pushButton")
self.verticalLayout.addWidget(self.pushButton)
self.pushButton_2 = QtWidgets.QPushButton(self.widget)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/btn_close.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.verticalLayout.addWidget(self.pushButton_2)
self.gridLayout.addLayout(self.verticalLayout, 1, 1, 1, 1)
self.verticalLayout_2.addWidget(self.splitter)
self.retranslateUi(DisplaySettings)
QtCore.QMetaObject.connectSlotsByName(DisplaySettings)
def retranslateUi(self, DisplaySettings):
_translate = QtCore.QCoreApplication.translate
DisplaySettings.setWindowTitle(_translate("DisplaySettings", "Displayed settings of table"))
self.label.setText(_translate("DisplaySettings", "All available information to display:"))
self.treeView.setToolTip(_translate("DisplaySettings", "Click to add"))
self.label_2.setText(_translate("DisplaySettings", "Informations selected to display:"))
self.label_3.setText(_translate("DisplaySettings", "Demo:"))
self.label_6.setToolTip(_translate("DisplaySettings", "Brief example"))
self.listWidget.setToolTip(_translate("DisplaySettings", "try to drag to reorder"))
self.pushButton_del.setToolTip(_translate("DisplaySettings", "Delete selected item(s)"))
self.pushButton_del.setText(_translate("DisplaySettings", "Delete"))
self.pushButton.setText(_translate("DisplaySettings", "Ok"))
self.pushButton_2.setText(_translate("DisplaySettings", "Cancel"))
class Ui_addFile(object):
def setupUi(self, addFile):
addFile.setObjectName("addFile")
addFile.resize(548, 535)
self.verticalLayout_2 = QtWidgets.QVBoxLayout(addFile)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.groupBox_3 = QtWidgets.QGroupBox(addFile)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_2 = QtWidgets.QLabel(self.groupBox_3)
self.label_2.setObjectName("label_2")
self.horizontalLayout_2.addWidget(self.label_2)
self.comboBox = QtWidgets.QComboBox(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox.sizePolicy().hasHeightForWidth())
self.comboBox.setSizePolicy(sizePolicy)
self.comboBox.setObjectName("comboBox")
self.horizontalLayout_2.addWidget(self.comboBox)
self.label_3 = ClickedLableGif(self.groupBox_3)
self.label_3.setText("")
self.label_3.setObjectName("label_3")
self.horizontalLayout_2.addWidget(self.label_3)
self.verticalLayout_2.addWidget(self.groupBox_3)
self.groupBox = QtWidgets.QGroupBox(addFile)
self.groupBox.setCheckable(False)
self.groupBox.setChecked(False)
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.pushButton = QtWidgets.QPushButton(self.groupBox)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/Open_folder_add_512px_1186192_easyicon.net.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setIconSize(QtCore.QSize(16, 18))
self.pushButton.setObjectName("pushButton")
self.gridLayout.addWidget(self.pushButton, 0, 0, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox)
self.groupBox_2 = QtWidgets.QGroupBox(addFile)
self.groupBox_2.setEnabled(True)
self.groupBox_2.setFlat(False)
self.groupBox_2.setCheckable(False)
self.groupBox_2.setChecked(False)
self.groupBox_2.setObjectName("groupBox_2")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox_2)
self.verticalLayout.setObjectName("verticalLayout")
self.plainTextEdit = QtWidgets.QPlainTextEdit(self.groupBox_2)
self.plainTextEdit.setEnabled(True)
self.plainTextEdit.viewport().setProperty("cursor", QtGui.QCursor(QtCore.Qt.IBeamCursor))
self.plainTextEdit.setMouseTracking(True)
self.plainTextEdit.setFocusPolicy(QtCore.Qt.ClickFocus)
self.plainTextEdit.setPlaceholderText("")
self.plainTextEdit.setObjectName("plainTextEdit")
self.verticalLayout.addWidget(self.plainTextEdit)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setSpacing(0)
self.horizontalLayout.setObjectName("horizontalLayout")
self.label = QtWidgets.QLabel(self.groupBox_2)
self.label.setObjectName("label")
self.horizontalLayout.addWidget(self.label)
self.lineEdit = QtWidgets.QLineEdit(self.groupBox_2)
self.lineEdit.setObjectName("lineEdit")
self.horizontalLayout.addWidget(self.lineEdit)
self.toolButton = QtWidgets.QToolButton(self.groupBox_2)
self.toolButton.setText("")
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/Question-mark.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.toolButton.setIcon(icon1)
self.toolButton.setAutoRaise(True)
self.toolButton.setObjectName("toolButton")
self.horizontalLayout.addWidget(self.toolButton)
self.verticalLayout.addLayout(self.horizontalLayout)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_2)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_3.addWidget(self.pushButton_2)
self.pushButton_8 = QtWidgets.QPushButton(self.groupBox_2)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/NCBI-logo-2.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_8.setIcon(icon3)
self.pushButton_8.setObjectName("pushButton_8")
self.horizontalLayout_3.addWidget(self.pushButton_8)
self.verticalLayout.addLayout(self.horizontalLayout_3)
self.verticalLayout_2.addWidget(self.groupBox_2)
self.retranslateUi(addFile)
self.groupBox_2.toggled['bool'].connect(self.groupBox.setEnabled)
self.groupBox.toggled['bool'].connect(self.groupBox_2.setEnabled)
QtCore.QMetaObject.connectSlotsByName(addFile)
def retranslateUi(self, addFile):
_translate = QtCore.QCoreApplication.translate
addFile.setWindowTitle(_translate("addFile", "Input"))
self.groupBox_3.setTitle(_translate("addFile", "Export"))
self.label_2.setText(_translate("addFile", "Export path:"))
self.label_3.setToolTip(_translate("addFile", "Brief example"))
self.groupBox.setTitle(_translate("addFile", "Input by files"))
self.pushButton.setText(_translate("addFile", "Choose Files"))
self.groupBox_2.setTitle(_translate("addFile", "Input by IDs"))
self.plainTextEdit.setToolTip(_translate("addFile", "<html><head/><body><p>\n"
"<pre style=\" font-size:12pt;\">\n"
"One id per line, for example:\n"
"KX289585\n"
"MF187611\n"
"GU130252\n"
"GU130251\n"
"EF643519\n"
"</pre>\n"
"</p></body></html>"))
self.label.setText(_translate("addFile", "Email:"))
self.lineEdit.setPlaceholderText(_translate("addFile", "*****@*****.**"))
self.pushButton_2.setText(_translate("addFile", "Start"))
self.pushButton_8.setText(_translate("addFile", "Search in NCBI"))