type="model_container")
my_model_container.Load('tests/cells/singlep.ndf')
#
# Must create solver.
#
my_heccer = scheduler.CreateSolver('My solver', 'heccer')
# Sets the segment of the model to run from
my_heccer.SetModelName('/singlep')
# set the timestep for the entire scheduler (solvers, inputs and outputs)
my_heccer.SetTimeStep(1e-05)
my_output = scheduler.CreateOutput('output_object', 'live_output')
my_output.AddOutput('/singlep/segments/soma', 'Vm')
my_output.SetAppend(True)
my_output.SetOrder('column')
scheduler.Run(steps=5)
output1 = my_output.GetData()
for i in range(0, len(output1[0])):
print "Timestep: %f, Vm: %f" % (output1[0][i], output1[1][i])
# Sets the segment of the model to run from
my_heccer.SetModelName('/singlep')
# set the timestep for the entire scheduler (solvers, inputs and outputs)
my_heccer.SetTimeStep(1e-05)
#
# Create a perfectclamp object for current holding.
#
my_input = scheduler.CreateInput('purkinje cell perfect clamp', 'perfectclamp')
my_input.AddInput('/singlep/segments/soma', 'Vm')
my_input.SetCommand(-0.06)
#
# Create Outputs
#
my_output = scheduler.CreateOutput('My output object', 'double_2_ascii')
my_output.SetFilename('/tmp/output')
my_output.AddOutput('/singlep/segments/soma', 'Vm')
my_output.SetMode('steps')
scheduler.Run(steps=30, finish=True)
print "Done!"
#
# Must create solver.
#
my_heccer = scheduler.CreateSolver('My solver', 'heccer')
# Sets the segment of the model to run from
my_heccer.SetModelName('/purk_test')
# set the timestep for the entire scheduler (solvers, inputs and outputs)
my_heccer.SetTimeStep(2e-05)
#
# Create Outputs
#
my_output = scheduler.CreateOutput('My output object', 'line')
my_output.AddOutput('/purk_test/segments/soma', 'Vm')
my_output.AddOutput('/purk_test/segments/soma/ca_pool', 'Ca')
my_output.AddOutput('/purk_test/segments/soma/km', 'state_n')
my_output.AddOutput('/purk_test/segments/soma/kdr', 'state_m')
my_output.AddOutput('/purk_test/segments/soma/kdr', 'state_h')
my_output.AddOutput('/purk_test/segments/soma/ka', 'state_m')
my_output.AddOutput('/purk_test/segments/soma/ka', 'state_h')
my_output.AddOutput('/purk_test/segments/soma/kh', 'state_m')
my_output.AddOutput('/purk_test/segments/soma/kh', 'state_h')
my_output.AddOutput('/purk_test/segments/soma/nap', 'state_n')
my_output.AddOutput('/purk_test/segments/soma/naf', 'state_m')
my_output.AddOutput('/purk_test/segments/soma/naf', 'state_h')
my_output.AddOutput('/purk_test/segments/soma/cat/cat_gate_activation', 'state_m')
my_output.AddOutput('/purk_test/segments/soma/cat/cat_gate_activation', 'state_h')