def test_issue_5596():
assert str(S("Q & C", locals=_clash1)) == 'And(C, Q)'
assert str(S('pi(x)', locals=_clash2)) == 'pi(x)'
assert str(S('pi(C, Q)', locals=_clash)) == 'pi(C, Q)'
locals = {}
exec_("from sympy.abc import Q, C", locals)
assert str(S('C&Q', locals)) == 'And(C, Q)'
def parse_expr(s, local_dict=None, transformations=standard_transformations,
global_dict=None):
"""Converts the string ``s`` to a SymPy expression, in ``local_dict``
Parameters
==========
s : str
The string to parse.
local_dict : dict, optional
A dictionary of local variables to use when parsing.
global_dict : dict, optional
A dictionary of global variables. By default, this is initialized
with ``from sympy import *``; provide this parameter to override
this behavior (for instance, to parse ``"Q & S"``).
transformations : tuple, optional
A tuple of transformation functions used to modify the tokens of the
parsed expression before evaluation. The default transformations
convert numeric literals into their SymPy equivalents, convert
undefined variables into SymPy symbols, and allow the use of standard
mathematical factorial notation (e.g. ``x!``).
Examples
========
>>> from sympy.parsing.sympy_parser import parse_expr
>>> parse_expr("1/2")
1/2
>>> type(_)
<class 'sympy.core.numbers.Half'>
>>> from sympy.parsing.sympy_parser import standard_transformations,\\
... implicit_multiplication_application
>>> transformations = (standard_transformations +
... (implicit_multiplication_application,))
>>> parse_expr("2x", transformations=transformations)
2*x
See Also
========
stringify_expr, eval_expr, standard_transformations,
implicit_multiplication_application
"""
if local_dict is None:
local_dict = {}
if global_dict is None:
global_dict = {}
exec_('from sympy import *', global_dict)
code = stringify_expr(s, local_dict, global_dict, transformations)
return eval_expr(code, local_dict, global_dict)
def test_newtons_method_function__pycode():
x = sp.Symbol('x', real=True)
expr = sp.cos(x) - x**3
func = newtons_method_function(expr, x)
py_mod = py_module(func)
namespace = {}
exec_(py_mod, namespace, namespace)
res = eval('newton(0.5)', namespace)
assert abs(res - 0.865474033102) < 1e-12
def __init__(self, args, expr, print_lambda=False, use_evalf=False,
float_wrap_evalf=False, complex_wrap_evalf=False,
use_np=False, use_python_math=False, use_python_cmath=False,
use_interval=False):
self.print_lambda = print_lambda
self.use_evalf = use_evalf
self.float_wrap_evalf = float_wrap_evalf
self.complex_wrap_evalf = complex_wrap_evalf
self.use_np = use_np
self.use_python_math = use_python_math
self.use_python_cmath = use_python_cmath
self.use_interval = use_interval
# Constructing the argument string
if not all([isinstance(a, Symbol) for a in args]):
raise ValueError('The arguments must be Symbols.')
else:
argstr = ', '.join([str(a) for a in args])
# Constructing the translation dictionaries and making the translation
self.dict_str = self.get_dict_str()
self.dict_fun = self.get_dict_fun()
exprstr = str(expr)
newexpr = self.tree2str_translate(self.str2tree(exprstr))
# Constructing the namespaces
namespace = {}
namespace.update(self.sympy_atoms_namespace(expr))
namespace.update(self.sympy_expression_namespace(expr))
# XXX Workaround
# Ugly workaround because Pow(a,Half) prints as sqrt(a)
# and sympy_expression_namespace can not catch it.
from sympy import sqrt
namespace.update({'sqrt': sqrt})
# End workaround.
if use_python_math:
namespace.update({'math': __import__('math')})
if use_python_cmath:
namespace.update({'cmath': __import__('cmath')})
if use_np:
try:
namespace.update({'np': __import__('numpy')})
except ImportError:
raise ImportError(
'experimental_lambdify failed to import numpy.')
if use_interval:
namespace.update({'imath': __import__(
'sympy.plotting.intervalmath', fromlist=['intervalmath'])})
namespace.update({'math': __import__('math')})
# Construct the lambda
if self.print_lambda:
print(newexpr)
eval_str = 'lambda %s : ( %s )' % (argstr, newexpr)
exec_("from __future__ import division; MYNEWLAMBDA = %s" % eval_str, namespace)
self.lambda_func = namespace['MYNEWLAMBDA']
def _import(module, reload=False):
"""
Creates a global translation dictionary for module.
The argument module has to be one of the following strings: "math",
"mpmath", "numpy", "sympy", "tensorflow".
These dictionaries map names of python functions to their equivalent in
other modules.
"""
# Required despite static analysis claiming it is not used
from sympy.external import import_module
try:
namespace, namespace_default, translations, import_commands = MODULES[
module]
except KeyError:
raise NameError(
"'%s' module can't be used for lambdification" % module)
# Clear namespace or exit
if namespace != namespace_default:
# The namespace was already generated, don't do it again if not forced.
if reload:
namespace.clear()
namespace.update(namespace_default)
else:
return
for import_command in import_commands:
if import_command.startswith('import_module'):
module = eval(import_command)
if module is not None:
namespace.update(module.__dict__)
continue
else:
try:
exec_(import_command, {}, namespace)
continue
except ImportError:
pass
raise ImportError(
"can't import '%s' with '%s' command" % (module, import_command))
# Add translated names to namespace
for sympyname, translation in translations.items():
namespace[sympyname] = namespace[translation]
# For computing the modulus of a sympy expression we use the builtin abs
# function, instead of the previously used fabs function for all
# translation modules. This is because the fabs function in the math
# module does not accept complex valued arguments. (see issue 9474). The
# only exception, where we don't use the builtin abs function is the
# mpmath translation module, because mpmath.fabs returns mpf objects in
# contrast to abs().
if 'Abs' not in namespace:
namespace['Abs'] = abs
def __init__(self, stmt, setup='pass', timer=timeit.default_timer, globals=globals()):
# copy of timeit.Timer.__init__
# similarity index 95%
self.timer = timer
stmt = timeit.reindent(stmt, 8)
setup = timeit.reindent(setup, 4)
src = timeit.template % {'stmt': stmt, 'setup': setup}
self.src = src # Save for traceback display
code = compile(src, timeit.dummy_src_name, "exec")
ns = {}
#exec code in globals(), ns -- original timeit code
exec_(code, globals, ns) # -- we use caller-provided globals instead
self.inner = ns["inner"]
def parse_expr(s, local_dict):
"""
Converts the string "s" to a SymPy expression, in local_dict.
It converts all numbers to Integers before feeding it to Python and
automatically creates Symbols.
"""
global_dict = {}
exec_('from sympy import *', global_dict)
try:
a = parse(s.strip(), mode="eval")
except SyntaxError:
raise SympifyError("Cannot parse %s." % repr(s))
a = Transform(local_dict, global_dict).visit(a)
e = compile(a, "<string>", "eval")
return eval(e, global_dict, local_dict)
def _import(module, reload="False"):
"""
Creates a global translation dictionary for module.
The argument module has to be one of the following strings: "math",
"mpmath", "numpy", "sympy".
These dictionaries map names of python functions to their equivalent in
other modules.
"""
try:
namespace, namespace_default, translations, import_commands = MODULES[
module]
except KeyError:
raise NameError(
"'%s' module can't be used for lambdification" % module)
# Clear namespace or exit
if namespace != namespace_default:
# The namespace was already generated, don't do it again if not forced.
if reload:
namespace.clear()
namespace.update(namespace_default)
else:
return
for import_command in import_commands:
if import_command.startswith('import_module'):
module = eval(import_command)
if module is not None:
namespace.update(module.__dict__)
continue
else:
try:
exec_(import_command, {}, namespace)
continue
except ImportError:
pass
raise ImportError(
"can't import '%s' with '%s' command" % (module, import_command))
# Add translated names to namespace
for sympyname, translation in translations.items():
namespace[sympyname] = namespace[translation]
def test_names_in_namespace():
# Every singleton name should be accessible from the 'from sympy import *'
# namespace in addition to the S object. However, it does not need to be
# by the same name (e.g., oo instead of S.Infinity).
# As a general rule, things should only be added to the singleton registry
# if they are used often enough that code can benefit either from the
# performance benefit of being able to use 'is' (this only matters in very
# tight loops), or from the memory savings of having exactly one instance
# (this matters for the numbers singletons, but very little else). The
# singleton registry is already a bit overpopulated, and things cannot be
# removed from it without breaking backwards compatibility. So if you got
# here by adding something new to the singletons, ask yourself if it
# really needs to be singletonized. Note that SymPy classes compare to one
# another just fine, so Class() == Class() will give True even if each
# Class() returns a new instance. Having unique instances is only
# necessary for the above noted performance gains. It should not be needed
# for any behavioral purposes.
# If you determine that something really should be a singleton, it must be
# accessible to sympify() without using 'S' (hence this test). Also, its
# str printer should print a form that does not use S. This is because
# sympify() disables attribute lookups by default for safety purposes.
d = {}
exec_('from sympy import *', d)
for name in dir(S) + list(S._classes_to_install):
if name.startswith('_'):
continue
if name == 'register':
continue
if isinstance(getattr(S, name), Rational):
continue
if getattr(S, name).__module__.startswith('sympy.physics'):
continue
if name in ['MySingleton', 'MySingleton_sub']:
# From the test above
continue
if name == 'NegativeInfinity':
# Accessible by -oo
continue
# Use is here because of complications with ==
assert any(getattr(S, name) is i or type(getattr(S, name)) is i for i in d.values()), name
def parse_expr(s, local_dict=None, transformations=standard_transformations,
global_dict=None, evaluate=True):
"""Converts the string ``s`` to a SymPy expression, in ``local_dict``
Parameters
==========
s : str
The string to parse.
local_dict : dict, optional
A dictionary of local variables to use when parsing.
global_dict : dict, optional
A dictionary of global variables. By default, this is initialized
with ``from sympy import *``; provide this parameter to override
this behavior (for instance, to parse ``"Q & S"``).
transformations : tuple, optional
A tuple of transformation functions used to modify the tokens of the
parsed expression before evaluation. The default transformations
convert numeric literals into their SymPy equivalents, convert
undefined variables into SymPy symbols, and allow the use of standard
mathematical factorial notation (e.g. ``x!``).
evaluate : bool, optional
When False, the order of the arguments will remain as they were in the
string and automatic simplification that would normally occur is
suppressed. (see examples)
Examples
========
>>> from sympy.parsing.sympy_parser import parse_expr
>>> parse_expr("1/2")
1/2
>>> type(_)
<class 'sympy.core.numbers.Half'>
>>> from sympy.parsing.sympy_parser import standard_transformations,\\
... implicit_multiplication_application
>>> transformations = (standard_transformations +
... (implicit_multiplication_application,))
>>> parse_expr("2x", transformations=transformations)
2*x
When evaluate=False, some automatic simplifications will not occur:
>>> parse_expr("2**3"), parse_expr("2**3", evaluate=False)
(8, 2**3)
In addition the order of the arguments will not be made canonical.
This feature allows one to tell exactly how the expression was entered:
>>> a = parse_expr('1 + x', evaluate=False)
>>> b = parse_expr('x + 1', evaluate=0)
>>> a == b
False
>>> a.args
(1, x)
>>> b.args
(x, 1)
See Also
========
stringify_expr, eval_expr, standard_transformations,
implicit_multiplication_application
"""
if local_dict is None:
local_dict = {}
if global_dict is None:
global_dict = {}
exec_('from sympy import *', global_dict)
code = stringify_expr(s, local_dict, global_dict, transformations)
if not evaluate:
code = compile(evaluateFalse(code), '<string>', 'eval')
return eval_expr(code, local_dict, global_dict)
def _build(self, code, name):
ns = {}
exec_(code, ns)
return ns[name]
from sympy import (symbols, Function, Integer, Matrix, Abs,
Rational, Float, S, WildFunction, ImmutableDenseMatrix, sin, true, false, ones,
sqrt, root, AlgebraicNumber, Symbol, Dummy, Wild)
from sympy.core.compatibility import exec_
from sympy.geometry import Point, Ellipse
from sympy.printing import srepr
from sympy.polys import ring, field, ZZ, QQ, lex, grlex, Poly
from sympy.polys.polyclasses import DMP
from sympy.polys.agca.extensions import FiniteExtension
x, y = symbols('x,y')
# eval(srepr(expr)) == expr has to succeed in the right environment. The right
# environment is the scope of "from sympy import *" for most cases.
ENV = {}
exec_("from sympy import *", ENV)
def sT(expr, string):
"""
sT := sreprTest
Tests that srepr delivers the expected string and that
the condition eval(srepr(expr))==expr holds.
"""
assert srepr(expr) == string
assert eval(string, ENV) == expr
def test_printmethod():
class R(Abs):
def lambdify(args, expr, modules=None, printer=None, use_imps=True,
dummify=False):
"""
Returns an anonymous function for fast calculation of numerical values.
If not specified differently by the user, ``modules`` defaults to
``["numpy"]`` if NumPy is installed, and ``["math", "mpmath", "sympy"]``
if it isn't, that is, SymPy functions are replaced as far as possible by
either ``numpy`` functions if available, and Python's standard library
``math``, or ``mpmath`` functions otherwise. To change this behavior, the
"modules" argument can be used. It accepts:
- the strings "math", "mpmath", "numpy", "numexpr", "sympy", "tensorflow"
- any modules (e.g. math)
- dictionaries that map names of sympy functions to arbitrary functions
- lists that contain a mix of the arguments above, with higher priority
given to entries appearing first.
.. warning::
Note that this function uses ``eval``, and thus shouldn't be used on
unsanitized input.
Arguments in the provided expression that are not valid Python identifiers
are substitued with dummy symbols. This allows for applied functions
(e.g. f(t)) to be supplied as arguments. Call the function with
dummify=True to replace all arguments with dummy symbols (if `args` is
not a string) - for example, to ensure that the arguments do not
redefine any built-in names.
For functions involving large array calculations, numexpr can provide a
significant speedup over numpy. Please note that the available functions
for numexpr are more limited than numpy but can be expanded with
implemented_function and user defined subclasses of Function. If specified,
numexpr may be the only option in modules. The official list of numexpr
functions can be found at:
https://github.com/pydata/numexpr#supported-functions
In previous releases ``lambdify`` replaced ``Matrix`` with ``numpy.matrix``
by default. As of release 1.0 ``numpy.array`` is the default.
To get the old default behavior you must pass in ``[{'ImmutableDenseMatrix':
numpy.matrix}, 'numpy']`` to the ``modules`` kwarg.
>>> from sympy import lambdify, Matrix
>>> from sympy.abc import x, y
>>> import numpy
>>> array2mat = [{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']
>>> f = lambdify((x, y), Matrix([x, y]), modules=array2mat)
>>> f(1, 2)
matrix([[1],
[2]])
Usage
=====
(1) Use one of the provided modules:
>>> from sympy import sin, tan, gamma
>>> from sympy.abc import x, y
>>> f = lambdify(x, sin(x), "math")
Attention: Functions that are not in the math module will throw a name
error when the function definition is evaluated! So this
would be better:
>>> f = lambdify(x, sin(x)*gamma(x), ("math", "mpmath", "sympy"))
(2) Use some other module:
>>> import numpy
>>> f = lambdify((x,y), tan(x*y), numpy)
Attention: There are naming differences between numpy and sympy. So if
you simply take the numpy module, e.g. sympy.atan will not be
translated to numpy.arctan. Use the modified module instead
by passing the string "numpy":
>>> f = lambdify((x,y), tan(x*y), "numpy")
>>> f(1, 2)
-2.18503986326
>>> from numpy import array
>>> f(array([1, 2, 3]), array([2, 3, 5]))
[-2.18503986 -0.29100619 -0.8559934 ]
In the above examples, the generated functions can accept scalar
values or numpy arrays as arguments. However, in some cases
the generated function relies on the input being a numpy array:
>>> from sympy import Piecewise
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "numpy")
>>> f(array([-1, 0, 1, 2]))
[-1. 0. 1. 0.5]
>>> f(0)
Traceback (most recent call last):
...
ZeroDivisionError: division by zero
In such cases, the input should be wrapped in a numpy array:
>>> float(f(array([0])))
0.0
Or if numpy functionality is not required another module can be used:
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "math")
>>> f(0)
0
(3) Use a dictionary defining custom functions:
>>> def my_cool_function(x): return 'sin(%s) is cool' % x
>>> myfuncs = {"sin" : my_cool_function}
>>> f = lambdify(x, sin(x), myfuncs); f(1)
'sin(1) is cool'
Examples
========
>>> from sympy.utilities.lambdify import implemented_function
>>> from sympy import sqrt, sin, Matrix
>>> from sympy import Function
>>> from sympy.abc import w, x, y, z
>>> f = lambdify(x, x**2)
>>> f(2)
4
>>> f = lambdify((x, y, z), [z, y, x])
>>> f(1,2,3)
[3, 2, 1]
>>> f = lambdify(x, sqrt(x))
>>> f(4)
2.0
>>> f = lambdify((x, y), sin(x*y)**2)
>>> f(0, 5)
0.0
>>> row = lambdify((x, y), Matrix((x, x + y)).T, modules='sympy')
>>> row(1, 2)
Matrix([[1, 3]])
Tuple arguments are handled and the lambdified function should
be called with the same type of arguments as were used to create
the function.:
>>> f = lambdify((x, (y, z)), x + y)
>>> f(1, (2, 4))
3
A more robust way of handling this is to always work with flattened
arguments:
>>> from sympy.utilities.iterables import flatten
>>> args = w, (x, (y, z))
>>> vals = 1, (2, (3, 4))
>>> f = lambdify(flatten(args), w + x + y + z)
>>> f(*flatten(vals))
10
Functions present in `expr` can also carry their own numerical
implementations, in a callable attached to the ``_imp_``
attribute. Usually you attach this using the
``implemented_function`` factory:
>>> f = implemented_function(Function('f'), lambda x: x+1)
>>> func = lambdify(x, f(x))
>>> func(4)
5
``lambdify`` always prefers ``_imp_`` implementations to implementations
in other namespaces, unless the ``use_imps`` input parameter is False.
Usage with Tensorflow module:
>>> import tensorflow as tf
>>> f = Max(x, sin(x))
>>> func = lambdify(x, f, 'tensorflow')
>>> result = func(tf.constant(1.0))
>>> result # a tf.Tensor representing the result of the calculation
<tf.Tensor 'Maximum:0' shape=() dtype=float32>
>>> sess = tf.Session()
>>> sess.run(result) # compute result
1.0
>>> var = tf.Variable(1.0)
>>> sess.run(tf.global_variables_initializer())
>>> sess.run(func(var)) # also works for tf.Variable and tf.Placeholder
1.0
>>> tensor = tf.constant([[1.0, 2.0], [3.0, 4.0]]) # works with any shape tensor
>>> sess.run(func(tensor))
array([[ 1., 2.],
[ 3., 4.]], dtype=float32)
"""
from sympy.core.symbol import Symbol
from sympy.utilities.iterables import flatten
# If the user hasn't specified any modules, use what is available.
module_provided = True
if modules is None:
module_provided = False
try:
_import("scipy")
except ImportError:
try:
_import("numpy")
except ImportError:
# Use either numpy (if available) or python.math where possible.
# XXX: This leads to different behaviour on different systems and
# might be the reason for irreproducible errors.
modules = ["math", "mpmath", "sympy"]
else:
modules = ["numpy"]
else:
modules = ["scipy", "numpy"]
# Get the needed namespaces.
namespaces = []
# First find any function implementations
if use_imps:
namespaces.append(_imp_namespace(expr))
# Check for dict before iterating
if isinstance(modules, (dict, str)) or not hasattr(modules, '__iter__'):
namespaces.append(modules)
else:
# consistency check
if _module_present('numexpr', modules) and len(modules) > 1:
raise TypeError("numexpr must be the only item in 'modules'")
namespaces += list(modules)
# fill namespace with first having highest priority
namespace = {}
for m in namespaces[::-1]:
buf = _get_namespace(m)
namespace.update(buf)
if hasattr(expr, "atoms"):
#Try if you can extract symbols from the expression.
#Move on if expr.atoms in not implemented.
syms = expr.atoms(Symbol)
for term in syms:
namespace.update({str(term): term})
if printer is None:
if _module_present('mpmath', namespaces):
from sympy.printing.pycode import MpmathPrinter as Printer
elif _module_present('scipy', namespaces):
from sympy.printing.pycode import SciPyPrinter as Printer
elif _module_present('numpy', namespaces):
from sympy.printing.pycode import NumPyPrinter as Printer
elif _module_present('numexpr', namespaces):
from sympy.printing.lambdarepr import NumExprPrinter as Printer
elif _module_present('tensorflow', namespaces):
from sympy.printing.lambdarepr import TensorflowPrinter as Printer
elif _module_present('sympy', namespaces):
from sympy.printing.pycode import SymPyPrinter as Printer
else:
from sympy.printing.pycode import PythonCodePrinter as Printer
user_functions = {}
for m in namespaces[::-1]:
if isinstance(m, dict):
for k in m:
user_functions[k] = k
printer = Printer({'fully_qualified_modules': False, 'inline': True,
'allow_unknown_functions': True,
'user_functions': user_functions})
# Get the names of the args, for creating a docstring
if not iterable(args):
args = (args,)
names = []
# Grab the callers frame, for getting the names by inspection (if needed)
callers_local_vars = inspect.currentframe().f_back.f_locals.items()
for n, var in enumerate(args):
if hasattr(var, 'name'):
names.append(var.name)
else:
# It's an iterable. Try to get name by inspection of calling frame.
name_list = [var_name for var_name, var_val in callers_local_vars
if var_val is var]
if len(name_list) == 1:
names.append(name_list[0])
else:
# Cannot infer name with certainty. arg_# will have to do.
names.append('arg_' + str(n))
imp_mod_lines = []
for mod, keys in (getattr(printer, 'module_imports', None) or {}).items():
for k in keys:
if k not in namespace:
imp_mod_lines.append("from %s import %s" % (mod, k))
for ln in imp_mod_lines:
exec_(ln, {}, namespace)
# Provide lambda expression with builtins, and compatible implementation of range
namespace.update({'builtins':builtins, 'range':range})
# Create the function definition code and execute it
funcname = '_lambdifygenerated'
if _module_present('tensorflow', namespaces):
funcprinter = _TensorflowEvaluatorPrinter(printer, dummify)
else:
funcprinter = _EvaluatorPrinter(printer, dummify)
funcstr = funcprinter.doprint(funcname, args, expr)
funclocals = {}
global _lambdify_generated_counter
filename = '<lambdifygenerated-%s>' % _lambdify_generated_counter
_lambdify_generated_counter += 1
c = compile(funcstr, filename, 'exec')
exec_(c, namespace, funclocals)
# mtime has to be None or else linecache.checkcache will remove it
linecache.cache[filename] = (len(funcstr), None, funcstr.splitlines(True), filename)
func = funclocals[funcname]
# Apply the docstring
sig = "func({0})".format(", ".join(str(i) for i in names))
sig = textwrap.fill(sig, subsequent_indent=' '*8)
expr_str = str(expr)
if len(expr_str) > 78:
expr_str = textwrap.wrap(expr_str, 75)[0] + '...'
func.__doc__ = (
"Created with lambdify. Signature:\n\n"
"{sig}\n\n"
"Expression:\n\n"
"{expr}\n\n"
"Source code:\n\n"
"{src}\n\n"
"Imported modules:\n\n"
"{imp_mods}"
).format(sig=sig, expr=expr_str, src=funcstr, imp_mods='\n'.join(imp_mod_lines))
return func
def parse_expr(s, local_dict=None, transformations=standard_transformations,
global_dict=None, evaluate=True):
"""Converts the string ``s`` to a SymPy expression, in ``local_dict``
Parameters
==========
s : str
The string to parse.
local_dict : dict, optional
A dictionary of local variables to use when parsing.
global_dict : dict, optional
A dictionary of global variables. By default, this is initialized
with ``from sympy import *``; provide this parameter to override
this behavior (for instance, to parse ``"Q & S"``).
transformations : tuple, optional
A tuple of transformation functions used to modify the tokens of the
parsed expression before evaluation. The default transformations
convert numeric literals into their SymPy equivalents, convert
undefined variables into SymPy symbols, and allow the use of standard
mathematical factorial notation (e.g. ``x!``).
Examples
========
>>> from sympy.parsing.sympy_parser import parse_expr
>>> parse_expr("1/2")
1/2
>>> type(_)
<class 'sympy.core.numbers.Half'>
>>> from sympy.parsing.sympy_parser import standard_transformations,\\
... implicit_multiplication_application
>>> transformations = (standard_transformations +
... (implicit_multiplication_application,))
>>> parse_expr("2x", transformations=transformations)
2*x
See Also
========
stringify_expr, eval_expr, standard_transformations,
implicit_multiplication_application
"""
if local_dict is None:
local_dict = {}
if global_dict is None:
global_dict = {}
exec_('from sympy import *', global_dict)
code = stringify_expr(s, local_dict, global_dict, transformations)
if evaluate is False:
code = compile(evaluateFalse(code), '<string>', 'eval')
return eval_expr(code, local_dict, global_dict)
# Imports used in srepr strings
from sympy.physics.quantum.constants import HBar
from sympy.physics.quantum.hilbert import DirectSumHilbertSpace, TensorProductHilbertSpace, TensorPowerHilbertSpace
from sympy.physics.quantum.spin import JzOp, J2Op
from sympy import Add, Integer, Mul, Rational, Tuple
from sympy.printing import srepr
from sympy.printing.pretty import pretty as xpretty
from sympy.printing.latex import latex
from sympy.core.compatibility import u_decode as u
MutableDenseMatrix = Matrix
ENV = {}
exec_("from sympy import *", ENV)
def sT(expr, string):
"""
sT := sreprTest
from sympy/printing/tests/test_repr.py
"""
assert srepr(expr) == string
assert eval(string) == expr
def pretty(expr):
"""ASCII pretty-printing"""
return xpretty(expr, use_unicode=False, wrap_line=False)
def parse_expr(s,
local_dict=None,
transformations=standard_transformations,
global_dict=None,
evaluate=True):
"""Converts the string ``s`` to a SymPy expression, in ``local_dict``
Parameters
==========
s : str
The string to parse.
local_dict : dict, optional
A dictionary of local variables to use when parsing.
global_dict : dict, optional
A dictionary of global variables. By default, this is initialized
with ``from sympy import *``; provide this parameter to override
this behavior (for instance, to parse ``"Q & S"``).
transformations : tuple, optional
A tuple of transformation functions used to modify the tokens of the
parsed expression before evaluation. The default transformations
convert numeric literals into their SymPy equivalents, convert
undefined variables into SymPy symbols, and allow the use of standard
mathematical factorial notation (e.g. ``x!``).
evaluate : bool, optional
When False, the order of the arguments will remain as they were in the
string and automatic simplification that would normally occur is
suppressed. (see examples)
Examples
========
>>> from sympy.parsing.sympy_parser import parse_expr
>>> parse_expr("1/2")
1/2
>>> type(_)
<class 'sympy.core.numbers.Half'>
>>> from sympy.parsing.sympy_parser import standard_transformations,\\
... implicit_multiplication_application
>>> transformations = (standard_transformations +
... (implicit_multiplication_application,))
>>> parse_expr("2x", transformations=transformations)
2*x
When evaluate=False, some automatic simplifications will not occur:
>>> parse_expr("2**3"), parse_expr("2**3", evaluate=False)
(8, 2**3)
In addition the order of the arguments will not be made canonical.
This feature allows one to tell exactly how the expression was entered:
>>> a = parse_expr('1 + x', evaluate=False)
>>> b = parse_expr('x + 1', evaluate=0)
>>> a == b
False
>>> a.args
(1, x)
>>> b.args
(x, 1)
See Also
========
stringify_expr, eval_expr, standard_transformations,
implicit_multiplication_application
"""
if local_dict is None:
local_dict = {}
elif not isinstance(local_dict, dict):
raise TypeError('expecting local_dict to be a dict')
if global_dict is None:
global_dict = {}
exec_('from sympy import *', global_dict)
elif not isinstance(global_dict, dict):
raise TypeError('expecting global_dict to be a dict')
transformations = transformations or ()
if transformations:
if not iterable(transformations):
raise TypeError('`transformations` should be a list of functions.')
for _ in transformations:
if not callable(_):
raise TypeError(
filldedent('''
expected a function in `transformations`,
not %s''' % func_name(_)))
if arity(_) != 3:
raise TypeError(
filldedent('''
a transformation should be function that
takes 3 arguments'''))
code = stringify_expr(s, local_dict, global_dict, transformations)
if not evaluate:
code = compile(evaluateFalse(code), '<string>', 'eval')
return eval_expr(code, local_dict, global_dict)
def __init__(self, args, expr, print_lambda=False, use_evalf=False,
float_wrap_evalf=False, complex_wrap_evalf=False,
use_np=False, use_python_math=False, use_python_cmath=False,
use_interval=False):
self.print_lambda = print_lambda
self.use_evalf = use_evalf
self.float_wrap_evalf = float_wrap_evalf
self.complex_wrap_evalf = complex_wrap_evalf
self.use_np = use_np
self.use_python_math = use_python_math
self.use_python_cmath = use_python_cmath
self.use_interval = use_interval
# Constructing the argument string
# - check
if not all([isinstance(a, Symbol) for a in args]):
raise ValueError('The arguments must be Symbols.')
# - use numbered symbols
syms = numbered_symbols(exclude=expr.free_symbols)
newargs = [next(syms) for i in args]
expr = expr.xreplace(dict(zip(args, newargs)))
argstr = ', '.join([str(a) for a in newargs])
del syms, newargs, args
# Constructing the translation dictionaries and making the translation
self.dict_str = self.get_dict_str()
self.dict_fun = self.get_dict_fun()
exprstr = str(expr)
# the & and | operators don't work on tuples, see discussion #12108
exprstr = exprstr.replace(" & "," and ").replace(" | "," or ")
newexpr = self.tree2str_translate(self.str2tree(exprstr))
# Constructing the namespaces
namespace = {}
namespace.update(self.sympy_atoms_namespace(expr))
namespace.update(self.sympy_expression_namespace(expr))
# XXX Workaround
# Ugly workaround because Pow(a,Half) prints as sqrt(a)
# and sympy_expression_namespace can not catch it.
from sympy import sqrt
namespace.update({'sqrt': sqrt})
namespace.update({'Eq': lambda x, y: x == y})
# End workaround.
if use_python_math:
namespace.update({'math': __import__('math')})
if use_python_cmath:
namespace.update({'cmath': __import__('cmath')})
if use_np:
try:
namespace.update({'np': __import__('numpy')})
except ImportError:
raise ImportError(
'experimental_lambdify failed to import numpy.')
if use_interval:
namespace.update({'imath': __import__(
'sympy.plotting.intervalmath', fromlist=['intervalmath'])})
namespace.update({'math': __import__('math')})
# Construct the lambda
if self.print_lambda:
print(newexpr)
eval_str = 'lambda %s : ( %s )' % (argstr, newexpr)
self.eval_str = eval_str
exec_("from __future__ import division; MYNEWLAMBDA = %s" % eval_str, namespace)
self.lambda_func = namespace['MYNEWLAMBDA']
def lambdify(args, expr, modules=None, printer=None, use_imps=True,
dummify=False):
"""
Translates a SymPy expression into an equivalent numeric function
For example, to convert the SymPy expression ``sin(x) + cos(x)`` to an
equivalent NumPy function that numerically evaluates it:
>>> from sympy import sin, cos, symbols, lambdify
>>> import numpy as np
>>> x = symbols('x')
>>> expr = sin(x) + cos(x)
>>> expr
sin(x) + cos(x)
>>> f = lambdify(x, expr, 'numpy')
>>> a = np.array([1, 2])
>>> f(a)
[1.38177329 0.49315059]
The primary purpose of this function is to provide a bridge from SymPy
expressions to numerical libraries such as NumPy, SciPy, NumExpr, mpmath,
and tensorflow. In general, SymPy functions do not work with objects from
other libraries, such as NumPy arrays, and functions from numeric
libraries like NumPy or mpmath do not work on SymPy expressions.
``lambdify`` bridges the two by converting a SymPy expression to an
equivalent numeric function.
The basic workflow with ``lambdify`` is to first create a SymPy expression
representing whatever mathematical function you wish to evaluate. This
should be done using only SymPy functions and expressions. Then, use
``lambdify`` to convert this to an equivalent function for numerical
evaluation. For instance, above we created ``expr`` using the SymPy symbol
``x`` and SymPy functions ``sin`` and ``cos``, then converted it to an
equivalent NumPy function ``f``, and called it on a NumPy array ``a``.
.. warning::
This function uses ``exec``, and thus shouldn't be used on unsanitized
input.
Arguments
=========
The first argument of ``lambdify`` is a variable or list of variables in
the expression. Variable lists may be nested. Variables can be Symbols,
undefined functions, or matrix symbols. The order and nesting of the
variables corresponds to the order and nesting of the parameters passed to
the lambdified function. For instance,
>>> from sympy.abc import x, y, z
>>> f = lambdify([x, (y, z)], x + y + z)
>>> f(1, (2, 3))
6
The second argument of ``lambdify`` is the expression, list of
expressions, or matrix to be evaluated. Lists may be nested. If the
expression is a list, the output will also be a list.
>>> f = lambdify(x, [x, [x + 1, x + 2]])
>>> f(1)
[1, [2, 3]]
If it is a matrix, an array will be returned (for the NumPy module).
>>> from sympy import Matrix
>>> f = lambdify(x, Matrix([x, x + 1]))
>>> f(1)
[[1]
[2]]
Note that the argument order here, variables then expression, is used to
emulate the Python ``lambda`` keyword. ``lambdify(x, expr)`` works
(roughly) like ``lambda x: expr`` (see :ref:`lambdify-how-it-works` below).
The third argument, ``modules`` is optional. If not specified, ``modules``
defaults to ``["scipy", "numpy"]`` if SciPy is installed, ``["numpy"]`` if
only NumPy is installed, and ``["math", "mpmath", "sympy"]`` if neither is
installed. That is, SymPy functions are replaced as far as possible by
either ``scipy`` or ``numpy`` functions if available, and Python's
standard library ``math``, or ``mpmath`` functions otherwise.
``modules`` can be one of the following types
- the strings ``"math"``, ``"mpmath"``, ``"numpy"``, ``"numexpr"``,
``"scipy"``, ``"sympy"``, or ``"tensorflow"``. This uses the
corresponding printer and namespace mapping for that module.
- a module (e.g., ``math``). This uses the global namespace of the
module. If the module is one of the above known modules, it will also
use the corresponding printer and namespace mapping (i.e.,
``modules=numpy`` is equivalent to ``modules="numpy"``).
- a dictionary that maps names of SymPy functions to arbitrary functions
(e.g., ``{'sin': custom_sin}``).
- a list that contains a mix of the arguments above, with higher priority
given to entries appearing first (e.g., to use the NumPy module but
override the ``sin`` function with a custom version, you can use
``[{'sin': custom_sin}, 'numpy']``).
The ``dummify`` keyword argument controls whether or not the variables in
the provided expression that are not valid Python identifiers are
substituted with dummy symbols. This allows for undefined functions like
``Function('f')(t)`` to be supplied as arguments. By default, the
variables are only dummified if they are not valid Python identifiers. Set
``dummify=True`` to replace all arguments with dummy symbols (if ``args``
is not a string) - for example, to ensure that the arguments do not
redefine any built-in names.
.. _lambdify-how-it-works:
How it works
============
When using this function, it helps a great deal to have an idea of what it
is doing. At its core, lambdify is nothing more than a namespace
translation, on top of a special printer that makes some corner cases work
properly.
To understand lambdify, first we must properly understand how Python
namespaces work. Say we had two files. One called ``sin_cos_sympy.py``,
with
.. code:: python
# sin_cos_sympy.py
from sympy import sin, cos
def sin_cos(x):
return sin(x) + cos(x)
and one called ``sin_cos_numpy.py`` with
.. code:: python
# sin_cos_numpy.py
from numpy import sin, cos
def sin_cos(x):
return sin(x) + cos(x)
The two files define an identical function ``sin_cos``. However, in the
first file, ``sin`` and ``cos`` are defined as the SymPy ``sin`` and
``cos``. In the second, they are defined as the NumPy versions.
If we were to import the first file and use the ``sin_cos`` function, we
would get something like
>>> from sin_cos_sympy import sin_cos # doctest: +SKIP
>>> sin_cos(1) # doctest: +SKIP
cos(1) + sin(1)
On the other hand, if we imported ``sin_cos`` from the second file, we
would get
>>> from sin_cos_numpy import sin_cos # doctest: +SKIP
>>> sin_cos(1) # doctest: +SKIP
1.38177329068
In the first case we got a symbolic output, because it used the symbolic
``sin`` and ``cos`` functions from SymPy. In the second, we got a numeric
result, because ``sin_cos`` used the numeric ``sin`` and ``cos`` functions
from NumPy. But notice that the versions of ``sin`` and ``cos`` that were
used was not inherent to the ``sin_cos`` function definition. Both
``sin_cos`` definitions are exactly the same. Rather, it was based on the
names defined at the module where the ``sin_cos`` function was defined.
The key point here is that when function in Python references a name that
is not defined in the function, that name is looked up in the "global"
namespace of the module where that function is defined.
Now, in Python, we can emulate this behavior without actually writing a
file to disk using the ``exec`` function. ``exec`` takes a string
containing a block of Python code, and a dictionary that should contain
the global variables of the module. It then executes the code "in" that
dictionary, as if it were the module globals. The following is equivalent
to the ``sin_cos`` defined in ``sin_cos_sympy.py``:
>>> import sympy
>>> module_dictionary = {'sin': sympy.sin, 'cos': sympy.cos}
>>> exec('''
... def sin_cos(x):
... return sin(x) + cos(x)
... ''', module_dictionary)
>>> sin_cos = module_dictionary['sin_cos']
>>> sin_cos(1)
cos(1) + sin(1)
and similarly with ``sin_cos_numpy``:
>>> import numpy
>>> module_dictionary = {'sin': numpy.sin, 'cos': numpy.cos}
>>> exec('''
... def sin_cos(x):
... return sin(x) + cos(x)
... ''', module_dictionary)
>>> sin_cos = module_dictionary['sin_cos']
>>> sin_cos(1)
1.38177329068
So now we can get an idea of how ``lambdify`` works. The name "lambdify"
comes from the fact that we can think of something like ``lambdify(x,
sin(x) + cos(x), 'numpy')`` as ``lambda x: sin(x) + cos(x)``, where
``sin`` and ``cos`` come from the ``numpy`` namespace. This is also why
the symbols argument is first in ``lambdify``, as opposed to most SymPy
functions where it comes after the expression: to better mimic the
``lambda`` keyword.
``lambdify`` takes the input expression (like ``sin(x) + cos(x)``) and
1. Converts it to a string
2. Creates a module globals dictionary based on the modules that are
passed in (by default, it uses the NumPy module)
3. Creates the string ``"def func({vars}): return {expr}"``, where ``{vars}`` is the
list of variables separated by commas, and ``{expr}`` is the string
created in step 1., then ``exec``s that string with the module globals
namespace and returns ``func``.
In fact, functions returned by ``lambdify`` support inspection. So you can
see exactly how they are defined by using ``inspect.getsource``, or ``??`` if you
are using IPython or the Jupyter notebook.
>>> f = lambdify(x, sin(x) + cos(x))
>>> import inspect
>>> print(inspect.getsource(f))
def _lambdifygenerated(x):
return (sin(x) + cos(x))
This shows us the source code of the function, but not the namespace it
was defined in. We can inspect that by looking at the ``__globals__``
attribute of ``f``:
>>> f.__globals__['sin']
<ufunc 'sin'>
>>> f.__globals__['cos']
<ufunc 'cos'>
>>> f.__globals__['sin'] is numpy.sin
True
This shows us that ``sin`` and ``cos`` in the namespace of ``f`` will be
``numpy.sin`` and ``numpy.cos``.
Note that there are some convenience layers in each of these steps, but at
the core, this is how ``lambdify`` works. Step 1 is done using the
``LambdaPrinter`` printers defined in the printing module (see
:mod:`sympy.printing.lambdarepr`). This allows different SymPy expressions
to define how they should be converted to a string for different modules.
You can change which printer ``lambdify`` uses by passing a custom printer
in to the ``printer`` argument.
Step 2 is augmented by certain translations. There are default
translations for each module, but you can provide your own by passing a
list to the ``modules`` argument. For instance,
>>> def mysin(x):
... print('taking the sin of', x)
... return numpy.sin(x)
...
>>> f = lambdify(x, sin(x), [{'sin': mysin}, 'numpy'])
>>> f(1)
taking the sin of 1
0.8414709848078965
The globals dictionary is generated from the list by merging the
dictionary ``{'sin': mysin}`` and the module dictionary for NumPy. The
merging is done so that earlier items take precedence, which is why
``mysin`` is used above instead of ``numpy.sin``.
If you want to modify the way ``lambdify`` works for a given function, it
is usually easiest to do so by modifying the globals dictionary as such.
In more complicated cases, it may be necessary to create and pass in a
custom printer.
Finally, step 3 is augmented with certain convenience operations, such as
the addition of a docstring.
Understanding how ``lambdify`` works can make it easier to avoid certain
gotchas when using it. For instance, a common mistake is to create a
lambdified function for one module (say, NumPy), and pass it objects from
another (say, a SymPy expression).
For instance, say we create
>>> from sympy.abc import x
>>> f = lambdify(x, x + 1, 'numpy')
Now if we pass in a NumPy array, we get that array plus 1
>>> import numpy
>>> a = numpy.array([1, 2])
>>> f(a)
[2 3]
But what happens if you make the mistake of passing in a SymPy expression
instead of a NumPy array:
>>> f(x + 1)
x + 2
This worked, but it was only by accident. Now take a different lambdified
function:
>>> from sympy import sin
>>> g = lambdify(x, x + sin(x), 'numpy')
This works as expected on NumPy arrays:
>>> g(a)
[1.84147098 2.90929743]
But if we try to pass in a SymPy expression, it fails
>>> g(x + 1)
Traceback (most recent call last):
...
AttributeError: 'Add' object has no attribute 'sin'
Now, let's look at what happened. The reason this fails is that ``g``
calls ``numpy.sin`` on the input expression, and ``numpy.sin`` does not
know how to operate on a SymPy object. **As a general rule, NumPy
functions do not know how to operate on SymPy expressions, and SymPy
functions do not know how to operate on NumPy arrays. This is why lambdify
exists: to provide a bridge between SymPy and NumPy.**
However, why is it that ``f`` did work? That's because ``f`` doesn't call
any functions, it only adds 1. So the resulting function that is created,
``def _lambdifygenerated(x): return x + 1`` does not depend on the globals
namespace it is defined in. Thus it works, but only by accident. A future
version of ``lambdify`` may remove this behavior.
Be aware that certain implementation details described here may change in
future versions of SymPy. The API of passing in custom modules and
printers will not change, but the details of how a lambda function is
created may change. However, the basic idea will remain the same, and
understanding it will be helpful to understanding the behavior of
lambdify.
**In general: you should create lambdified functions for one module (say,
NumPy), and only pass it input types that are compatible with that module
(say, NumPy arrays).** Remember that by default, if the ``module``
argument is not provided, ``lambdify`` creates functions using the NumPy
and SciPy namespaces.
Examples
========
>>> from sympy.utilities.lambdify import implemented_function
>>> from sympy import sqrt, sin, Matrix
>>> from sympy import Function
>>> from sympy.abc import w, x, y, z
>>> f = lambdify(x, x**2)
>>> f(2)
4
>>> f = lambdify((x, y, z), [z, y, x])
>>> f(1,2,3)
[3, 2, 1]
>>> f = lambdify(x, sqrt(x))
>>> f(4)
2.0
>>> f = lambdify((x, y), sin(x*y)**2)
>>> f(0, 5)
0.0
>>> row = lambdify((x, y), Matrix((x, x + y)).T, modules='sympy')
>>> row(1, 2)
Matrix([[1, 3]])
``lambdify`` can be used to translate SymPy expressions into mpmath
functions. This may be preferable to using ``evalf`` (which uses mpmath on
the backend) in some cases.
>>> import mpmath
>>> f = lambdify(x, sin(x), 'mpmath')
>>> f(1)
0.8414709848078965
Tuple arguments are handled and the lambdified function should
be called with the same type of arguments as were used to create
the function:
>>> f = lambdify((x, (y, z)), x + y)
>>> f(1, (2, 4))
3
The ``flatten`` function can be used to always work with flattened
arguments:
>>> from sympy.utilities.iterables import flatten
>>> args = w, (x, (y, z))
>>> vals = 1, (2, (3, 4))
>>> f = lambdify(flatten(args), w + x + y + z)
>>> f(*flatten(vals))
10
Functions present in ``expr`` can also carry their own numerical
implementations, in a callable attached to the ``_imp_`` attribute. This
can be used with undefined functions using the ``implemented_function``
factory:
>>> f = implemented_function(Function('f'), lambda x: x+1)
>>> func = lambdify(x, f(x))
>>> func(4)
5
``lambdify`` always prefers ``_imp_`` implementations to implementations
in other namespaces, unless the ``use_imps`` input parameter is False.
Usage with Tensorflow:
>>> import tensorflow as tf
>>> from sympy import Max, sin
>>> f = Max(x, sin(x))
>>> func = lambdify(x, f, 'tensorflow')
>>> result = func(tf.constant(1.0))
>>> print(result) # a tf.Tensor representing the result of the calculation
Tensor("Maximum:0", shape=(), dtype=float32)
>>> sess = tf.Session()
>>> sess.run(result) # compute result
1.0
>>> var = tf.Variable(1.0)
>>> sess.run(tf.global_variables_initializer())
>>> sess.run(func(var)) # also works for tf.Variable and tf.Placeholder
1.0
>>> tensor = tf.constant([[1.0, 2.0], [3.0, 4.0]]) # works with any shape tensor
>>> sess.run(func(tensor))
[[1. 2.]
[3. 4.]]
Notes
=====
- For functions involving large array calculations, numexpr can provide a
significant speedup over numpy. Please note that the available functions
for numexpr are more limited than numpy but can be expanded with
``implemented_function`` and user defined subclasses of Function. If
specified, numexpr may be the only option in modules. The official list
of numexpr functions can be found at:
https://numexpr.readthedocs.io/en/latest/user_guide.html#supported-functions
- In previous versions of SymPy, ``lambdify`` replaced ``Matrix`` with
``numpy.matrix`` by default. As of SymPy 1.0 ``numpy.array`` is the
default. To get the old default behavior you must pass in
``[{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']`` to the
``modules`` kwarg.
>>> from sympy import lambdify, Matrix
>>> from sympy.abc import x, y
>>> import numpy
>>> array2mat = [{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']
>>> f = lambdify((x, y), Matrix([x, y]), modules=array2mat)
>>> f(1, 2)
[[1]
[2]]
- In the above examples, the generated functions can accept scalar
values or numpy arrays as arguments. However, in some cases
the generated function relies on the input being a numpy array:
>>> from sympy import Piecewise
>>> from sympy.utilities.pytest import ignore_warnings
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "numpy")
>>> with ignore_warnings(RuntimeWarning):
... f(numpy.array([-1, 0, 1, 2]))
[-1. 0. 1. 0.5]
>>> f(0)
Traceback (most recent call last):
...
ZeroDivisionError: division by zero
In such cases, the input should be wrapped in a numpy array:
>>> with ignore_warnings(RuntimeWarning):
... float(f(numpy.array([0])))
0.0
Or if numpy functionality is not required another module can be used:
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "math")
>>> f(0)
0
"""
from sympy.core.symbol import Symbol
# If the user hasn't specified any modules, use what is available.
if modules is None:
try:
_import("scipy")
except ImportError:
try:
_import("numpy")
except ImportError:
# Use either numpy (if available) or python.math where possible.
# XXX: This leads to different behaviour on different systems and
# might be the reason for irreproducible errors.
modules = ["math", "mpmath", "sympy"]
else:
modules = ["numpy"]
else:
modules = ["scipy", "numpy"]
# Get the needed namespaces.
namespaces = []
# First find any function implementations
if use_imps:
namespaces.append(_imp_namespace(expr))
# Check for dict before iterating
if isinstance(modules, (dict, string_types)) or not hasattr(modules, '__iter__'):
namespaces.append(modules)
else:
# consistency check
if _module_present('numexpr', modules) and len(modules) > 1:
raise TypeError("numexpr must be the only item in 'modules'")
namespaces += list(modules)
# fill namespace with first having highest priority
namespace = {}
for m in namespaces[::-1]:
buf = _get_namespace(m)
namespace.update(buf)
if hasattr(expr, "atoms"):
#Try if you can extract symbols from the expression.
#Move on if expr.atoms in not implemented.
syms = expr.atoms(Symbol)
for term in syms:
namespace.update({str(term): term})
if printer is None:
if _module_present('mpmath', namespaces):
from sympy.printing.pycode import MpmathPrinter as Printer
elif _module_present('scipy', namespaces):
from sympy.printing.pycode import SciPyPrinter as Printer
elif _module_present('numpy', namespaces):
from sympy.printing.pycode import NumPyPrinter as Printer
elif _module_present('numexpr', namespaces):
from sympy.printing.lambdarepr import NumExprPrinter as Printer
elif _module_present('tensorflow', namespaces):
from sympy.printing.tensorflow import TensorflowPrinter as Printer
elif _module_present('sympy', namespaces):
from sympy.printing.pycode import SymPyPrinter as Printer
else:
from sympy.printing.pycode import PythonCodePrinter as Printer
user_functions = {}
for m in namespaces[::-1]:
if isinstance(m, dict):
for k in m:
user_functions[k] = k
printer = Printer({'fully_qualified_modules': False, 'inline': True,
'allow_unknown_functions': True,
'user_functions': user_functions})
# Get the names of the args, for creating a docstring
if not iterable(args):
args = (args,)
names = []
# Grab the callers frame, for getting the names by inspection (if needed)
callers_local_vars = inspect.currentframe().f_back.f_locals.items()
for n, var in enumerate(args):
if hasattr(var, 'name'):
names.append(var.name)
else:
# It's an iterable. Try to get name by inspection of calling frame.
name_list = [var_name for var_name, var_val in callers_local_vars
if var_val is var]
if len(name_list) == 1:
names.append(name_list[0])
else:
# Cannot infer name with certainty. arg_# will have to do.
names.append('arg_' + str(n))
imp_mod_lines = []
for mod, keys in (getattr(printer, 'module_imports', None) or {}).items():
for k in keys:
if k not in namespace:
imp_mod_lines.append("from %s import %s" % (mod, k))
for ln in imp_mod_lines:
exec_(ln, {}, namespace)
# Provide lambda expression with builtins, and compatible implementation of range
namespace.update({'builtins':builtins, 'range':range})
# Create the function definition code and execute it
funcname = '_lambdifygenerated'
if _module_present('tensorflow', namespaces):
funcprinter = _TensorflowEvaluatorPrinter(printer, dummify)
else:
funcprinter = _EvaluatorPrinter(printer, dummify)
funcstr = funcprinter.doprint(funcname, args, expr)
funclocals = {}
global _lambdify_generated_counter
filename = '<lambdifygenerated-%s>' % _lambdify_generated_counter
_lambdify_generated_counter += 1
c = compile(funcstr, filename, 'exec')
exec_(c, namespace, funclocals)
# mtime has to be None or else linecache.checkcache will remove it
linecache.cache[filename] = (len(funcstr), None, funcstr.splitlines(True), filename)
func = funclocals[funcname]
# Apply the docstring
sig = "func({0})".format(", ".join(str(i) for i in names))
sig = textwrap.fill(sig, subsequent_indent=' '*8)
expr_str = str(expr)
if len(expr_str) > 78:
expr_str = textwrap.wrap(expr_str, 75)[0] + '...'
func.__doc__ = (
"Created with lambdify. Signature:\n\n"
"{sig}\n\n"
"Expression:\n\n"
"{expr}\n\n"
"Source code:\n\n"
"{src}\n\n"
"Imported modules:\n\n"
"{imp_mods}"
).format(sig=sig, expr=expr_str, src=funcstr, imp_mods='\n'.join(imp_mod_lines))
return func
def spstr2spexpr(spstr):
from sympy.parsing.sympy_parser import parse_expr
from sympy.core.compatibility import exec_
global_dict = {}
exec_("from symplus import *", global_dict)
return parse_expr(spstr, global_dict=global_dict, evaluate=False)
def lambdify(args,
expr,
modules=None,
printer=None,
use_imps=True,
dummify=False):
"""
Returns an anonymous function for fast calculation of numerical values.
If not specified differently by the user, ``modules`` defaults to
``["numpy"]`` if NumPy is installed, and ``["math", "mpmath", "sympy"]``
if it isn't, that is, SymPy functions are replaced as far as possible by
either ``numpy`` functions if available, and Python's standard library
``math``, or ``mpmath`` functions otherwise. To change this behavior, the
"modules" argument can be used. It accepts:
- the strings "math", "mpmath", "numpy", "numexpr", "sympy", "tensorflow"
- any modules (e.g. math)
- dictionaries that map names of sympy functions to arbitrary functions
- lists that contain a mix of the arguments above, with higher priority
given to entries appearing first.
.. warning::
Note that this function uses ``eval``, and thus shouldn't be used on
unsanitized input.
Arguments in the provided expression that are not valid Python identifiers
are substitued with dummy symbols. This allows for applied functions
(e.g. f(t)) to be supplied as arguments. Call the function with
dummify=True to replace all arguments with dummy symbols (if `args` is
not a string) - for example, to ensure that the arguments do not
redefine any built-in names.
For functions involving large array calculations, numexpr can provide a
significant speedup over numpy. Please note that the available functions
for numexpr are more limited than numpy but can be expanded with
implemented_function and user defined subclasses of Function. If specified,
numexpr may be the only option in modules. The official list of numexpr
functions can be found at:
https://github.com/pydata/numexpr#supported-functions
In previous releases ``lambdify`` replaced ``Matrix`` with ``numpy.matrix``
by default. As of release 1.0 ``numpy.array`` is the default.
To get the old default behavior you must pass in ``[{'ImmutableDenseMatrix':
numpy.matrix}, 'numpy']`` to the ``modules`` kwarg.
>>> from sympy import lambdify, Matrix
>>> from sympy.abc import x, y
>>> import numpy
>>> array2mat = [{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']
>>> f = lambdify((x, y), Matrix([x, y]), modules=array2mat)
>>> f(1, 2)
matrix([[1],
[2]])
Usage
=====
(1) Use one of the provided modules:
>>> from sympy import sin, tan, gamma
>>> from sympy.abc import x, y
>>> f = lambdify(x, sin(x), "math")
Attention: Functions that are not in the math module will throw a name
error when the function definition is evaluated! So this
would be better:
>>> f = lambdify(x, sin(x)*gamma(x), ("math", "mpmath", "sympy"))
(2) Use some other module:
>>> import numpy
>>> f = lambdify((x,y), tan(x*y), numpy)
Attention: There are naming differences between numpy and sympy. So if
you simply take the numpy module, e.g. sympy.atan will not be
translated to numpy.arctan. Use the modified module instead
by passing the string "numpy":
>>> f = lambdify((x,y), tan(x*y), "numpy")
>>> f(1, 2)
-2.18503986326
>>> from numpy import array
>>> f(array([1, 2, 3]), array([2, 3, 5]))
[-2.18503986 -0.29100619 -0.8559934 ]
In the above examples, the generated functions can accept scalar
values or numpy arrays as arguments. However, in some cases
the generated function relies on the input being a numpy array:
>>> from sympy import Piecewise
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "numpy")
>>> f(array([-1, 0, 1, 2]))
[-1. 0. 1. 0.5]
>>> f(0)
Traceback (most recent call last):
...
ZeroDivisionError: division by zero
In such cases, the input should be wrapped in a numpy array:
>>> float(f(array([0])))
0.0
Or if numpy functionality is not required another module can be used:
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "math")
>>> f(0)
0
(3) Use a dictionary defining custom functions:
>>> def my_cool_function(x): return 'sin(%s) is cool' % x
>>> myfuncs = {"sin" : my_cool_function}
>>> f = lambdify(x, sin(x), myfuncs); f(1)
'sin(1) is cool'
Examples
========
>>> from sympy.utilities.lambdify import implemented_function
>>> from sympy import sqrt, sin, Matrix
>>> from sympy import Function
>>> from sympy.abc import w, x, y, z
>>> f = lambdify(x, x**2)
>>> f(2)
4
>>> f = lambdify((x, y, z), [z, y, x])
>>> f(1,2,3)
[3, 2, 1]
>>> f = lambdify(x, sqrt(x))
>>> f(4)
2.0
>>> f = lambdify((x, y), sin(x*y)**2)
>>> f(0, 5)
0.0
>>> row = lambdify((x, y), Matrix((x, x + y)).T, modules='sympy')
>>> row(1, 2)
Matrix([[1, 3]])
Tuple arguments are handled and the lambdified function should
be called with the same type of arguments as were used to create
the function.:
>>> f = lambdify((x, (y, z)), x + y)
>>> f(1, (2, 4))
3
A more robust way of handling this is to always work with flattened
arguments:
>>> from sympy.utilities.iterables import flatten
>>> args = w, (x, (y, z))
>>> vals = 1, (2, (3, 4))
>>> f = lambdify(flatten(args), w + x + y + z)
>>> f(*flatten(vals))
10
Functions present in `expr` can also carry their own numerical
implementations, in a callable attached to the ``_imp_``
attribute. Usually you attach this using the
``implemented_function`` factory:
>>> f = implemented_function(Function('f'), lambda x: x+1)
>>> func = lambdify(x, f(x))
>>> func(4)
5
``lambdify`` always prefers ``_imp_`` implementations to implementations
in other namespaces, unless the ``use_imps`` input parameter is False.
Usage with Tensorflow module:
>>> import tensorflow as tf
>>> f = Max(x, sin(x))
>>> func = lambdify(x, f, 'tensorflow')
>>> result = func(tf.constant(1.0))
>>> result # a tf.Tensor representing the result of the calculation
<tf.Tensor 'Maximum:0' shape=() dtype=float32>
>>> sess = tf.Session()
>>> sess.run(result) # compute result
1.0
>>> var = tf.Variable(1.0)
>>> sess.run(tf.global_variables_initializer())
>>> sess.run(func(var)) # also works for tf.Variable and tf.Placeholder
1.0
>>> tensor = tf.constant([[1.0, 2.0], [3.0, 4.0]]) # works with any shape tensor
>>> sess.run(func(tensor))
array([[ 1., 2.],
[ 3., 4.]], dtype=float32)
"""
from sympy.core.symbol import Symbol
from sympy.utilities.iterables import flatten
# If the user hasn't specified any modules, use what is available.
module_provided = True
if modules is None:
module_provided = False
try:
_import("scipy")
except ImportError:
try:
_import("numpy")
except ImportError:
# Use either numpy (if available) or python.math where possible.
# XXX: This leads to different behaviour on different systems and
# might be the reason for irreproducible errors.
modules = ["math", "mpmath", "sympy"]
else:
modules = ["numpy"]
else:
modules = ["scipy", "numpy"]
# Get the needed namespaces.
namespaces = []
# First find any function implementations
if use_imps:
namespaces.append(_imp_namespace(expr))
# Check for dict before iterating
if isinstance(modules, (dict, str)) or not hasattr(modules, '__iter__'):
namespaces.append(modules)
else:
# consistency check
if _module_present('numexpr', modules) and len(modules) > 1:
raise TypeError("numexpr must be the only item in 'modules'")
namespaces += list(modules)
# fill namespace with first having highest priority
namespace = {}
for m in namespaces[::-1]:
buf = _get_namespace(m)
namespace.update(buf)
if hasattr(expr, "atoms"):
#Try if you can extract symbols from the expression.
#Move on if expr.atoms in not implemented.
syms = expr.atoms(Symbol)
for term in syms:
namespace.update({str(term): term})
if printer is None:
if _module_present('mpmath', namespaces):
from sympy.printing.pycode import MpmathPrinter as Printer
elif _module_present('scipy', namespaces):
from sympy.printing.pycode import SciPyPrinter as Printer
elif _module_present('numpy', namespaces):
from sympy.printing.pycode import NumPyPrinter as Printer
elif _module_present('numexpr', namespaces):
from sympy.printing.lambdarepr import NumExprPrinter as Printer
elif _module_present('tensorflow', namespaces):
from sympy.printing.lambdarepr import TensorflowPrinter as Printer
elif _module_present('sympy', namespaces):
from sympy.printing.pycode import SymPyPrinter as Printer
else:
from sympy.printing.pycode import PythonCodePrinter as Printer
user_functions = {}
for m in namespaces[::-1]:
if isinstance(m, dict):
for k in m:
user_functions[k] = k
printer = Printer({
'fully_qualified_modules': False,
'inline': True,
'allow_unknown_functions': True,
'user_functions': user_functions
})
# Get the names of the args, for creating a docstring
if not iterable(args):
args = (args, )
names = []
# Grab the callers frame, for getting the names by inspection (if needed)
callers_local_vars = inspect.currentframe().f_back.f_locals.items()
for n, var in enumerate(args):
if hasattr(var, 'name'):
names.append(var.name)
else:
# It's an iterable. Try to get name by inspection of calling frame.
name_list = [
var_name for var_name, var_val in callers_local_vars
if var_val is var
]
if len(name_list) == 1:
names.append(name_list[0])
else:
# Cannot infer name with certainty. arg_# will have to do.
names.append('arg_' + str(n))
imp_mod_lines = []
for mod, keys in (getattr(printer, 'module_imports', None) or {}).items():
for k in keys:
if k not in namespace:
imp_mod_lines.append("from %s import %s" % (mod, k))
for ln in imp_mod_lines:
exec_(ln, {}, namespace)
# Provide lambda expression with builtins, and compatible implementation of range
namespace.update({'builtins': builtins, 'range': range})
# Create the function definition code and execute it
funcname = '_lambdifygenerated'
if _module_present('tensorflow', namespaces):
funcprinter = _TensorflowEvaluatorPrinter(printer, dummify)
else:
funcprinter = _EvaluatorPrinter(printer, dummify)
funcstr = funcprinter.doprint(funcname, args, expr)
funclocals = {}
global _lambdify_generated_counter
filename = '<lambdifygenerated-%s>' % _lambdify_generated_counter
_lambdify_generated_counter += 1
c = compile(funcstr, filename, 'exec')
exec_(c, namespace, funclocals)
# mtime has to be None or else linecache.checkcache will remove it
linecache.cache[filename] = (len(funcstr), None, funcstr.splitlines(True),
filename)
func = funclocals[funcname]
# Apply the docstring
sig = "func({0})".format(", ".join(str(i) for i in names))
sig = textwrap.fill(sig, subsequent_indent=' ' * 8)
expr_str = str(expr)
if len(expr_str) > 78:
expr_str = textwrap.wrap(expr_str, 75)[0] + '...'
func.__doc__ = ("Created with lambdify. Signature:\n\n"
"{sig}\n\n"
"Expression:\n\n"
"{expr}\n\n"
"Source code:\n\n"
"{src}\n\n"
"Imported modules:\n\n"
"{imp_mods}").format(sig=sig,
expr=expr_str,
src=funcstr,
imp_mods='\n'.join(imp_mod_lines))
return func
def lambdify(args: iterable,
expr,
modules=None,
printer=None,
use_imps=True,
dummify=False):
"""Convert a SymPy expression into a function that allows for fast
numeric evaluation.
.. warning::
This function uses ``exec``, and thus shouldn't be used on
unsanitized input.
.. versionchanged:: 1.7.0
Passing a set for the *args* parameter is deprecated as sets are
unordered. Use an ordered iterable such as a list or tuple.
Explanation
===========
For example, to convert the SymPy expression ``sin(x) + cos(x)`` to an
equivalent NumPy function that numerically evaluates it:
>>> from sympy import sin, cos, symbols, lambdify
>>> import numpy as np
>>> x = symbols('x')
>>> expr = sin(x) + cos(x)
>>> expr
sin(x) + cos(x)
>>> f = lambdify(x, expr, 'numpy')
>>> a = np.array([1, 2])
>>> f(a)
[1.38177329 0.49315059]
The primary purpose of this function is to provide a bridge from SymPy
expressions to numerical libraries such as NumPy, SciPy, NumExpr, mpmath,
and tensorflow. In general, SymPy functions do not work with objects from
other libraries, such as NumPy arrays, and functions from numeric
libraries like NumPy or mpmath do not work on SymPy expressions.
``lambdify`` bridges the two by converting a SymPy expression to an
equivalent numeric function.
The basic workflow with ``lambdify`` is to first create a SymPy expression
representing whatever mathematical function you wish to evaluate. This
should be done using only SymPy functions and expressions. Then, use
``lambdify`` to convert this to an equivalent function for numerical
evaluation. For instance, above we created ``expr`` using the SymPy symbol
``x`` and SymPy functions ``sin`` and ``cos``, then converted it to an
equivalent NumPy function ``f``, and called it on a NumPy array ``a``.
Parameters
==========
args : List[Symbol]
A variable or a list of variables whose nesting represents the
nesting of the arguments that will be passed to the function.
Variables can be symbols, undefined functions, or matrix symbols.
>>> from sympy import Eq
>>> from sympy.abc import x, y, z
The list of variables should match the structure of how the
arguments will be passed to the function. Simply enclose the
parameters as they will be passed in a list.
To call a function like ``f(x)`` then ``[x]``
should be the first argument to ``lambdify``; for this
case a single ``x`` can also be used:
>>> f = lambdify(x, x + 1)
>>> f(1)
2
>>> f = lambdify([x], x + 1)
>>> f(1)
2
To call a function like ``f(x, y)`` then ``[x, y]`` will
be the first argument of the ``lambdify``:
>>> f = lambdify([x, y], x + y)
>>> f(1, 1)
2
To call a function with a single 3-element tuple like
``f((x, y, z))`` then ``[(x, y, z)]`` will be the first
argument of the ``lambdify``:
>>> f = lambdify([(x, y, z)], Eq(z**2, x**2 + y**2))
>>> f((3, 4, 5))
True
If two args will be passed and the first is a scalar but
the second is a tuple with two arguments then the items
in the list should match that structure:
>>> f = lambdify([x, (y, z)], x + y + z)
>>> f(1, (2, 3))
6
expr : Expr
An expression, list of expressions, or matrix to be evaluated.
Lists may be nested.
If the expression is a list, the output will also be a list.
>>> f = lambdify(x, [x, [x + 1, x + 2]])
>>> f(1)
[1, [2, 3]]
If it is a matrix, an array will be returned (for the NumPy module).
>>> from sympy import Matrix
>>> f = lambdify(x, Matrix([x, x + 1]))
>>> f(1)
[[1]
[2]]
Note that the argument order here (variables then expression) is used
to emulate the Python ``lambda`` keyword. ``lambdify(x, expr)`` works
(roughly) like ``lambda x: expr``
(see :ref:`lambdify-how-it-works` below).
modules : str, optional
Specifies the numeric library to use.
If not specified, *modules* defaults to:
- ``["scipy", "numpy"]`` if SciPy is installed
- ``["numpy"]`` if only NumPy is installed
- ``["math", "mpmath", "sympy"]`` if neither is installed.
That is, SymPy functions are replaced as far as possible by
either ``scipy`` or ``numpy`` functions if available, and Python's
standard library ``math``, or ``mpmath`` functions otherwise.
*modules* can be one of the following types:
- The strings ``"math"``, ``"mpmath"``, ``"numpy"``, ``"numexpr"``,
``"scipy"``, ``"sympy"``, or ``"tensorflow"``. This uses the
corresponding printer and namespace mapping for that module.
- A module (e.g., ``math``). This uses the global namespace of the
module. If the module is one of the above known modules, it will
also use the corresponding printer and namespace mapping
(i.e., ``modules=numpy`` is equivalent to ``modules="numpy"``).
- A dictionary that maps names of SymPy functions to arbitrary
functions
(e.g., ``{'sin': custom_sin}``).
- A list that contains a mix of the arguments above, with higher
priority given to entries appearing first
(e.g., to use the NumPy module but override the ``sin`` function
with a custom version, you can use
``[{'sin': custom_sin}, 'numpy']``).
dummify : bool, optional
Whether or not the variables in the provided expression that are not
valid Python identifiers are substituted with dummy symbols.
This allows for undefined functions like ``Function('f')(t)`` to be
supplied as arguments. By default, the variables are only dummified
if they are not valid Python identifiers.
Set ``dummify=True`` to replace all arguments with dummy symbols
(if ``args`` is not a string) - for example, to ensure that the
arguments do not redefine any built-in names.
Examples
========
>>> from sympy.utilities.lambdify import implemented_function
>>> from sympy import sqrt, sin, Matrix
>>> from sympy import Function
>>> from sympy.abc import w, x, y, z
>>> f = lambdify(x, x**2)
>>> f(2)
4
>>> f = lambdify((x, y, z), [z, y, x])
>>> f(1,2,3)
[3, 2, 1]
>>> f = lambdify(x, sqrt(x))
>>> f(4)
2.0
>>> f = lambdify((x, y), sin(x*y)**2)
>>> f(0, 5)
0.0
>>> row = lambdify((x, y), Matrix((x, x + y)).T, modules='sympy')
>>> row(1, 2)
Matrix([[1, 3]])
``lambdify`` can be used to translate SymPy expressions into mpmath
functions. This may be preferable to using ``evalf`` (which uses mpmath on
the backend) in some cases.
>>> f = lambdify(x, sin(x), 'mpmath')
>>> f(1)
0.8414709848078965
Tuple arguments are handled and the lambdified function should
be called with the same type of arguments as were used to create
the function:
>>> f = lambdify((x, (y, z)), x + y)
>>> f(1, (2, 4))
3
The ``flatten`` function can be used to always work with flattened
arguments:
>>> from sympy.utilities.iterables import flatten
>>> args = w, (x, (y, z))
>>> vals = 1, (2, (3, 4))
>>> f = lambdify(flatten(args), w + x + y + z)
>>> f(*flatten(vals))
10
Functions present in ``expr`` can also carry their own numerical
implementations, in a callable attached to the ``_imp_`` attribute. This
can be used with undefined functions using the ``implemented_function``
factory:
>>> f = implemented_function(Function('f'), lambda x: x+1)
>>> func = lambdify(x, f(x))
>>> func(4)
5
``lambdify`` always prefers ``_imp_`` implementations to implementations
in other namespaces, unless the ``use_imps`` input parameter is False.
Usage with Tensorflow:
>>> import tensorflow as tf
>>> from sympy import Max, sin, lambdify
>>> from sympy.abc import x
>>> f = Max(x, sin(x))
>>> func = lambdify(x, f, 'tensorflow')
After tensorflow v2, eager execution is enabled by default.
If you want to get the compatible result across tensorflow v1 and v2
as same as this tutorial, run this line.
>>> tf.compat.v1.enable_eager_execution()
If you have eager execution enabled, you can get the result out
immediately as you can use numpy.
If you pass tensorflow objects, you may get an ``EagerTensor``
object instead of value.
>>> result = func(tf.constant(1.0))
>>> print(result)
tf.Tensor(1.0, shape=(), dtype=float32)
>>> print(result.__class__)
<class 'tensorflow.python.framework.ops.EagerTensor'>
You can use ``.numpy()`` to get the numpy value of the tensor.
>>> result.numpy()
1.0
>>> var = tf.Variable(2.0)
>>> result = func(var) # also works for tf.Variable and tf.Placeholder
>>> result.numpy()
2.0
And it works with any shape array.
>>> tensor = tf.constant([[1.0, 2.0], [3.0, 4.0]])
>>> result = func(tensor)
>>> result.numpy()
[[1. 2.]
[3. 4.]]
Notes
=====
- For functions involving large array calculations, numexpr can provide a
significant speedup over numpy. Please note that the available functions
for numexpr are more limited than numpy but can be expanded with
``implemented_function`` and user defined subclasses of Function. If
specified, numexpr may be the only option in modules. The official list
of numexpr functions can be found at:
https://numexpr.readthedocs.io/en/latest/user_guide.html#supported-functions
- In previous versions of SymPy, ``lambdify`` replaced ``Matrix`` with
``numpy.matrix`` by default. As of SymPy 1.0 ``numpy.array`` is the
default. To get the old default behavior you must pass in
``[{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']`` to the
``modules`` kwarg.
>>> from sympy import lambdify, Matrix
>>> from sympy.abc import x, y
>>> import numpy
>>> array2mat = [{'ImmutableDenseMatrix': numpy.matrix}, 'numpy']
>>> f = lambdify((x, y), Matrix([x, y]), modules=array2mat)
>>> f(1, 2)
[[1]
[2]]
- In the above examples, the generated functions can accept scalar
values or numpy arrays as arguments. However, in some cases
the generated function relies on the input being a numpy array:
>>> from sympy import Piecewise
>>> from sympy.testing.pytest import ignore_warnings
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "numpy")
>>> with ignore_warnings(RuntimeWarning):
... f(numpy.array([-1, 0, 1, 2]))
[-1. 0. 1. 0.5]
>>> f(0)
Traceback (most recent call last):
...
ZeroDivisionError: division by zero
In such cases, the input should be wrapped in a numpy array:
>>> with ignore_warnings(RuntimeWarning):
... float(f(numpy.array([0])))
0.0
Or if numpy functionality is not required another module can be used:
>>> f = lambdify(x, Piecewise((x, x <= 1), (1/x, x > 1)), "math")
>>> f(0)
0
.. _lambdify-how-it-works:
How it works
============
When using this function, it helps a great deal to have an idea of what it
is doing. At its core, lambdify is nothing more than a namespace
translation, on top of a special printer that makes some corner cases work
properly.
To understand lambdify, first we must properly understand how Python
namespaces work. Say we had two files. One called ``sin_cos_sympy.py``,
with
.. code:: python
# sin_cos_sympy.py
from sympy import sin, cos
def sin_cos(x):
return sin(x) + cos(x)
and one called ``sin_cos_numpy.py`` with
.. code:: python
# sin_cos_numpy.py
from numpy import sin, cos
def sin_cos(x):
return sin(x) + cos(x)
The two files define an identical function ``sin_cos``. However, in the
first file, ``sin`` and ``cos`` are defined as the SymPy ``sin`` and
``cos``. In the second, they are defined as the NumPy versions.
If we were to import the first file and use the ``sin_cos`` function, we
would get something like
>>> from sin_cos_sympy import sin_cos # doctest: +SKIP
>>> sin_cos(1) # doctest: +SKIP
cos(1) + sin(1)
On the other hand, if we imported ``sin_cos`` from the second file, we
would get
>>> from sin_cos_numpy import sin_cos # doctest: +SKIP
>>> sin_cos(1) # doctest: +SKIP
1.38177329068
In the first case we got a symbolic output, because it used the symbolic
``sin`` and ``cos`` functions from SymPy. In the second, we got a numeric
result, because ``sin_cos`` used the numeric ``sin`` and ``cos`` functions
from NumPy. But notice that the versions of ``sin`` and ``cos`` that were
used was not inherent to the ``sin_cos`` function definition. Both
``sin_cos`` definitions are exactly the same. Rather, it was based on the
names defined at the module where the ``sin_cos`` function was defined.
The key point here is that when function in Python references a name that
is not defined in the function, that name is looked up in the "global"
namespace of the module where that function is defined.
Now, in Python, we can emulate this behavior without actually writing a
file to disk using the ``exec`` function. ``exec`` takes a string
containing a block of Python code, and a dictionary that should contain
the global variables of the module. It then executes the code "in" that
dictionary, as if it were the module globals. The following is equivalent
to the ``sin_cos`` defined in ``sin_cos_sympy.py``:
>>> import sympy
>>> module_dictionary = {'sin': sympy.sin, 'cos': sympy.cos}
>>> exec('''
... def sin_cos(x):
... return sin(x) + cos(x)
... ''', module_dictionary)
>>> sin_cos = module_dictionary['sin_cos']
>>> sin_cos(1)
cos(1) + sin(1)
and similarly with ``sin_cos_numpy``:
>>> import numpy
>>> module_dictionary = {'sin': numpy.sin, 'cos': numpy.cos}
>>> exec('''
... def sin_cos(x):
... return sin(x) + cos(x)
... ''', module_dictionary)
>>> sin_cos = module_dictionary['sin_cos']
>>> sin_cos(1)
1.38177329068
So now we can get an idea of how ``lambdify`` works. The name "lambdify"
comes from the fact that we can think of something like ``lambdify(x,
sin(x) + cos(x), 'numpy')`` as ``lambda x: sin(x) + cos(x)``, where
``sin`` and ``cos`` come from the ``numpy`` namespace. This is also why
the symbols argument is first in ``lambdify``, as opposed to most SymPy
functions where it comes after the expression: to better mimic the
``lambda`` keyword.
``lambdify`` takes the input expression (like ``sin(x) + cos(x)``) and
1. Converts it to a string
2. Creates a module globals dictionary based on the modules that are
passed in (by default, it uses the NumPy module)
3. Creates the string ``"def func({vars}): return {expr}"``, where ``{vars}`` is the
list of variables separated by commas, and ``{expr}`` is the string
created in step 1., then ``exec``s that string with the module globals
namespace and returns ``func``.
In fact, functions returned by ``lambdify`` support inspection. So you can
see exactly how they are defined by using ``inspect.getsource``, or ``??`` if you
are using IPython or the Jupyter notebook.
>>> f = lambdify(x, sin(x) + cos(x))
>>> import inspect
>>> print(inspect.getsource(f))
def _lambdifygenerated(x):
return (sin(x) + cos(x))
This shows us the source code of the function, but not the namespace it
was defined in. We can inspect that by looking at the ``__globals__``
attribute of ``f``:
>>> f.__globals__['sin']
<ufunc 'sin'>
>>> f.__globals__['cos']
<ufunc 'cos'>
>>> f.__globals__['sin'] is numpy.sin
True
This shows us that ``sin`` and ``cos`` in the namespace of ``f`` will be
``numpy.sin`` and ``numpy.cos``.
Note that there are some convenience layers in each of these steps, but at
the core, this is how ``lambdify`` works. Step 1 is done using the
``LambdaPrinter`` printers defined in the printing module (see
:mod:`sympy.printing.lambdarepr`). This allows different SymPy expressions
to define how they should be converted to a string for different modules.
You can change which printer ``lambdify`` uses by passing a custom printer
in to the ``printer`` argument.
Step 2 is augmented by certain translations. There are default
translations for each module, but you can provide your own by passing a
list to the ``modules`` argument. For instance,
>>> def mysin(x):
... print('taking the sin of', x)
... return numpy.sin(x)
...
>>> f = lambdify(x, sin(x), [{'sin': mysin}, 'numpy'])
>>> f(1)
taking the sin of 1
0.8414709848078965
The globals dictionary is generated from the list by merging the
dictionary ``{'sin': mysin}`` and the module dictionary for NumPy. The
merging is done so that earlier items take precedence, which is why
``mysin`` is used above instead of ``numpy.sin``.
If you want to modify the way ``lambdify`` works for a given function, it
is usually easiest to do so by modifying the globals dictionary as such.
In more complicated cases, it may be necessary to create and pass in a
custom printer.
Finally, step 3 is augmented with certain convenience operations, such as
the addition of a docstring.
Understanding how ``lambdify`` works can make it easier to avoid certain
gotchas when using it. For instance, a common mistake is to create a
lambdified function for one module (say, NumPy), and pass it objects from
another (say, a SymPy expression).
For instance, say we create
>>> from sympy.abc import x
>>> f = lambdify(x, x + 1, 'numpy')
Now if we pass in a NumPy array, we get that array plus 1
>>> import numpy
>>> a = numpy.array([1, 2])
>>> f(a)
[2 3]
But what happens if you make the mistake of passing in a SymPy expression
instead of a NumPy array:
>>> f(x + 1)
x + 2
This worked, but it was only by accident. Now take a different lambdified
function:
>>> from sympy import sin
>>> g = lambdify(x, x + sin(x), 'numpy')
This works as expected on NumPy arrays:
>>> g(a)
[1.84147098 2.90929743]
But if we try to pass in a SymPy expression, it fails
>>> try:
... g(x + 1)
... # NumPy release after 1.17 raises TypeError instead of
... # AttributeError
... except (AttributeError, TypeError):
... raise AttributeError() # doctest: +IGNORE_EXCEPTION_DETAIL
Traceback (most recent call last):
...
AttributeError:
Now, let's look at what happened. The reason this fails is that ``g``
calls ``numpy.sin`` on the input expression, and ``numpy.sin`` does not
know how to operate on a SymPy object. **As a general rule, NumPy
functions do not know how to operate on SymPy expressions, and SymPy
functions do not know how to operate on NumPy arrays. This is why lambdify
exists: to provide a bridge between SymPy and NumPy.**
However, why is it that ``f`` did work? That's because ``f`` doesn't call
any functions, it only adds 1. So the resulting function that is created,
``def _lambdifygenerated(x): return x + 1`` does not depend on the globals
namespace it is defined in. Thus it works, but only by accident. A future
version of ``lambdify`` may remove this behavior.
Be aware that certain implementation details described here may change in
future versions of SymPy. The API of passing in custom modules and
printers will not change, but the details of how a lambda function is
created may change. However, the basic idea will remain the same, and
understanding it will be helpful to understanding the behavior of
lambdify.
**In general: you should create lambdified functions for one module (say,
NumPy), and only pass it input types that are compatible with that module
(say, NumPy arrays).** Remember that by default, if the ``module``
argument is not provided, ``lambdify`` creates functions using the NumPy
and SciPy namespaces.
"""
from sympy.core.symbol import Symbol
# If the user hasn't specified any modules, use what is available.
if modules is None:
try:
_import("scipy")
except ImportError:
try:
_import("numpy")
except ImportError:
# Use either numpy (if available) or python.math where possible.
# XXX: This leads to different behaviour on different systems and
# might be the reason for irreproducible errors.
modules = ["math", "mpmath", "sympy"]
else:
modules = ["numpy"]
else:
modules = ["numpy", "scipy"]
# Get the needed namespaces.
namespaces = []
# First find any function implementations
if use_imps:
namespaces.append(_imp_namespace(expr))
# Check for dict before iterating
if isinstance(modules, (dict, str)) or not hasattr(modules, '__iter__'):
namespaces.append(modules)
else:
# consistency check
if _module_present('numexpr', modules) and len(modules) > 1:
raise TypeError("numexpr must be the only item in 'modules'")
namespaces += list(modules)
# fill namespace with first having highest priority
namespace = {}
for m in namespaces[::-1]:
buf = _get_namespace(m)
namespace.update(buf)
if hasattr(expr, "atoms"):
#Try if you can extract symbols from the expression.
#Move on if expr.atoms in not implemented.
syms = expr.atoms(Symbol)
for term in syms:
namespace.update({str(term): term})
if printer is None:
if _module_present('mpmath', namespaces):
from sympy.printing.pycode import MpmathPrinter as Printer
elif _module_present('scipy', namespaces):
from sympy.printing.pycode import SciPyPrinter as Printer
elif _module_present('numpy', namespaces):
from sympy.printing.pycode import NumPyPrinter as Printer
elif _module_present('numexpr', namespaces):
from sympy.printing.lambdarepr import NumExprPrinter as Printer
elif _module_present('tensorflow', namespaces):
from sympy.printing.tensorflow import TensorflowPrinter as Printer
elif _module_present('sympy', namespaces):
from sympy.printing.pycode import SymPyPrinter as Printer
else:
from sympy.printing.pycode import PythonCodePrinter as Printer
user_functions = {}
for m in namespaces[::-1]:
if isinstance(m, dict):
for k in m:
user_functions[k] = k
printer = Printer({
'fully_qualified_modules': False,
'inline': True,
'allow_unknown_functions': True,
'user_functions': user_functions
})
if isinstance(args, set):
SymPyDeprecationWarning(
feature=
"The list of arguments is a `set`. This leads to unpredictable results",
useinstead=": Convert set into list or tuple",
issue=20013,
deprecated_since_version="1.6.3").warn()
# Get the names of the args, for creating a docstring
if not iterable(args):
args = (args, )
names = []
# Grab the callers frame, for getting the names by inspection (if needed)
callers_local_vars = inspect.currentframe().f_back.f_locals.items()
for n, var in enumerate(args):
if hasattr(var, 'name'):
names.append(var.name)
else:
# It's an iterable. Try to get name by inspection of calling frame.
name_list = [
var_name for var_name, var_val in callers_local_vars
if var_val is var
]
if len(name_list) == 1:
names.append(name_list[0])
else:
# Cannot infer name with certainty. arg_# will have to do.
names.append('arg_' + str(n))
# Create the function definition code and execute it
funcname = '_lambdifygenerated'
if _module_present('tensorflow', namespaces):
funcprinter = _TensorflowEvaluatorPrinter(printer, dummify)
else:
funcprinter = _EvaluatorPrinter(printer, dummify)
funcstr = funcprinter.doprint(funcname, args, expr)
# Collect the module imports from the code printers.
imp_mod_lines = []
for mod, keys in (getattr(printer, 'module_imports', None) or {}).items():
for k in keys:
if k not in namespace:
ln = "from %s import %s" % (mod, k)
try:
exec_(ln, {}, namespace)
except ImportError:
# Tensorflow 2.0 has issues with importing a specific
# function from its submodule.
# https://github.com/tensorflow/tensorflow/issues/33022
ln = "%s = %s.%s" % (k, mod, k)
exec_(ln, {}, namespace)
imp_mod_lines.append(ln)
# Provide lambda expression with builtins, and compatible implementation of range
namespace.update({'builtins': builtins, 'range': range})
funclocals = {}
global _lambdify_generated_counter
filename = '<lambdifygenerated-%s>' % _lambdify_generated_counter
_lambdify_generated_counter += 1
c = compile(funcstr, filename, 'exec')
exec_(c, namespace, funclocals)
# mtime has to be None or else linecache.checkcache will remove it
linecache.cache[filename] = (len(funcstr), None, funcstr.splitlines(True),
filename)
func = funclocals[funcname]
# Apply the docstring
sig = "func({})".format(", ".join(str(i) for i in names))
sig = textwrap.fill(sig, subsequent_indent=' ' * 8)
expr_str = str(expr)
if len(expr_str) > 78:
expr_str = textwrap.wrap(expr_str, 75)[0] + '...'
func.__doc__ = ("Created with lambdify. Signature:\n\n"
"{sig}\n\n"
"Expression:\n\n"
"{expr}\n\n"
"Source code:\n\n"
"{src}\n\n"
"Imported modules:\n\n"
"{imp_mods}").format(sig=sig,
expr=expr_str,
src=funcstr,
imp_mods='\n'.join(imp_mod_lines))
return func
from sympy.core.compatibility import exec_
from sympy.testing.pytest import XFAIL
# Imports used in srepr strings
from sympy.physics.quantum.spin import JzOp
from sympy.printing import srepr
from sympy.printing.pretty import pretty as xpretty
from sympy.printing.latex import latex
from sympy.core.compatibility import u_decode as u
MutableDenseMatrix = Matrix
ENV = {} # type: Dict[str, Any]
exec_("from sympy import *", ENV)
exec_("from sympy.physics.quantum import *", ENV)
exec_("from sympy.physics.quantum.cg import *", ENV)
exec_("from sympy.physics.quantum.spin import *", ENV)
exec_("from sympy.physics.quantum.hilbert import *", ENV)
exec_("from sympy.physics.quantum.qubit import *", ENV)
exec_("from sympy.physics.quantum.qexpr import *", ENV)
exec_("from sympy.physics.quantum.gate import *", ENV)
exec_("from sympy.physics.quantum.constants import *", ENV)
def sT(expr, string):
"""
sT := sreprTest
from sympy/printing/tests/test_repr.py
"""
def _build(self, code, name):
ns = {}
exec_(code, ns)
return ns[name]
def __init__(self, args, expr, print_lambda=False, use_evalf=False,
float_wrap_evalf=False, complex_wrap_evalf=False,
use_np=False, use_python_math=False, use_python_cmath=False,
use_interval=False):
self.print_lambda = print_lambda
self.use_evalf = use_evalf
self.float_wrap_evalf = float_wrap_evalf
self.complex_wrap_evalf = complex_wrap_evalf
self.use_np = use_np
self.use_python_math = use_python_math
self.use_python_cmath = use_python_cmath
self.use_interval = use_interval
# Constructing the argument string
# - check
if not all([isinstance(a, Symbol) for a in args]):
raise ValueError('The arguments must be Symbols.')
# - use numbered symbols
syms = numbered_symbols(exclude=expr.free_symbols)
newargs = [next(syms) for i in args]
expr = expr.xreplace(dict(zip(args, newargs)))
argstr = ', '.join([str(a) for a in newargs])
del syms, newargs, args
# Constructing the translation dictionaries and making the translation
self.dict_str = self.get_dict_str()
self.dict_fun = self.get_dict_fun()
exprstr = str(expr)
newexpr = self.tree2str_translate(self.str2tree(exprstr))
# Constructing the namespaces
namespace = {}
namespace.update(self.sympy_atoms_namespace(expr))
namespace.update(self.sympy_expression_namespace(expr))
# XXX Workaround
# Ugly workaround because Pow(a,Half) prints as sqrt(a)
# and sympy_expression_namespace can not catch it.
from sympy import sqrt
namespace.update({'sqrt': sqrt})
namespace.update({'Eq': lambda x, y: x == y})
# End workaround.
if use_python_math:
namespace.update({'math': __import__('math')})
if use_python_cmath:
namespace.update({'cmath': __import__('cmath')})
if use_np:
try:
namespace.update({'np': __import__('numpy')})
except ImportError:
raise ImportError(
'experimental_lambdify failed to import numpy.')
if use_interval:
namespace.update({'imath': __import__(
'sympy.plotting.intervalmath', fromlist=['intervalmath'])})
namespace.update({'math': __import__('math')})
# Construct the lambda
if self.print_lambda:
print(newexpr)
eval_str = 'lambda %s : ( %s )' % (argstr, newexpr)
self.eval_str = eval_str
exec_("from __future__ import division; MYNEWLAMBDA = %s" % eval_str, namespace)
self.lambda_func = namespace['MYNEWLAMBDA']
