def test_activity_used_execute_methods():
"""test activity creation and used and execute methods"""
a = Activity(name='Fuzz', description='hipster beard dataset')
a.used({
'id': 'syn101',
'versionNumber': 42,
'concreteType': 'org.sagebionetworks.repo.model.FileEntity'
})
a.executed('syn102', targetVersion=1)
usedEntities = a['used']
len(usedEntities) == 2
assert a['name'] == 'Fuzz'
assert a['description'] == 'hipster beard dataset'
## ??? are activities supposed to come back in order? Let's not count on it
used_syn101 = _find_used(
a, lambda res: res['reference']['targetId'] == 'syn101')
assert used_syn101['reference']['targetVersionNumber'] == 42
assert used_syn101['wasExecuted'] == False
used_syn102 = _find_used(
a, lambda res: res['reference']['targetId'] == 'syn102')
assert used_syn102['reference']['targetVersionNumber'] == 1
assert used_syn102['wasExecuted'] == True
def test_activity_used_url():
"""test activity creation with UsedURLs"""
u1 = 'http://xkcd.com'
u2 = {'name': 'The Onion', 'url': 'http://theonion.com'}
u3 = {
'name': 'Seriously advanced code',
'url':
'https://github.com/cbare/Pydoku/blob/ef88069f70823808f3462410e941326ae7ffbbe0/solver.py',
'wasExecuted': True
}
u4 = {
'name': 'Heavy duty algorithm',
'url': 'https://github.com/cbare/Pydoku/blob/master/solver.py'
}
a = Activity(name='Foobarbat',
description='Apply foo to a bar and a bat',
used=[u1, u2, u3],
executed=[u3, u4])
a.executed(url='http://cran.r-project.org/web/packages/glmnet/index.html',
name='glm.net')
a.used(url='http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day',
name='earthquakes')
u = _find_used(a, lambda res: 'url' in res and res['url'] == u1)
assert u is not None
assert u['url'] == u1
assert u['wasExecuted'] == False
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'The Onion')
assert u is not None
assert u['url'] == 'http://theonion.com'
assert u['wasExecuted'] == False
u = _find_used(
a,
lambda res: 'name' in res and res['name'] == 'Seriously advanced code')
assert u is not None
assert u['url'] == u3['url']
assert u['wasExecuted'] == u3['wasExecuted']
u = _find_used(
a, lambda res: 'name' in res and res['name'] == 'Heavy duty algorithm')
assert u is not None
assert u['url'] == u4['url']
assert u['wasExecuted'] == True
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'glm.net')
assert u is not None
assert u[
'url'] == 'http://cran.r-project.org/web/packages/glmnet/index.html'
assert u['wasExecuted'] == True
u = _find_used(a,
lambda res: 'name' in res and res['name'] == 'earthquakes')
assert u is not None
assert u[
'url'] == 'http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day'
assert u['wasExecuted'] == False
def test_activity_used_url():
"""test activity creation with UsedURLs"""
u1 = "http://xkcd.com"
u2 = {"name": "The Onion", "url": "http://theonion.com"}
u3 = {
"name": "Seriously advanced code",
"url": "https://github.com/cbare/Pydoku/blob/ef88069f70823808f3462410e941326ae7ffbbe0/solver.py",
"wasExecuted": True,
}
u4 = {"name": "Heavy duty algorithm", "url": "https://github.com/cbare/Pydoku/blob/master/solver.py"}
a = Activity(name="Foobarbat", description="Apply foo to a bar and a bat", used=[u1, u2, u3], executed=[u3, u4])
a.executed(url="http://cran.r-project.org/web/packages/glmnet/index.html", name="glm.net")
a.used(url="http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day", name="earthquakes")
u = _find_used(a, lambda res: "url" in res and res["url"] == u1)
assert u is not None
assert u["url"] == u1
assert u["wasExecuted"] == False
u = _find_used(a, lambda res: "name" in res and res["name"] == "The Onion")
assert u is not None
assert u["url"] == "http://theonion.com"
assert u["wasExecuted"] == False
u = _find_used(a, lambda res: "name" in res and res["name"] == "Seriously advanced code")
assert u is not None
assert u["url"] == u3["url"]
assert u["wasExecuted"] == u3["wasExecuted"]
u = _find_used(a, lambda res: "name" in res and res["name"] == "Heavy duty algorithm")
assert u is not None
assert u["url"] == u4["url"]
assert u["wasExecuted"] == True
u = _find_used(a, lambda res: "name" in res and res["name"] == "glm.net")
assert u is not None
assert u["url"] == "http://cran.r-project.org/web/packages/glmnet/index.html"
assert u["wasExecuted"] == True
u = _find_used(a, lambda res: "name" in res and res["name"] == "earthquakes")
assert u is not None
assert u["url"] == "http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day"
assert u["wasExecuted"] == False
def test_activity_used_execute_methods():
"""test activity creation and used and execute methods"""
a = Activity(name='Fuzz', description='hipster beard dataset')
a.used({'id': 'syn101', 'versionNumber': 42, 'concreteType': 'org.sagebionetworks.repo.model.FileEntity'})
a.executed('syn102', targetVersion=1)
usedEntities = a['used']
len(usedEntities), 2
assert_equals(a['name'], 'Fuzz')
assert_equals(a['description'], 'hipster beard dataset')
used_syn101 = _find_used(a, lambda res: res['reference']['targetId'] == 'syn101')
assert_equals(used_syn101['reference']['targetVersionNumber'], 42)
assert_false(used_syn101['wasExecuted'])
used_syn102 = _find_used(a, lambda res: res['reference']['targetId'] == 'syn102')
assert_equals(used_syn102['reference']['targetVersionNumber'], 1)
assert_true(used_syn102['wasExecuted'])
def test_activity_used_execute_methods():
"""test activity creation and used and execute methods"""
a = Activity(name='Fuzz', description='hipster beard dataset')
a.used({'id':'syn101', 'versionNumber':42, 'concreteType': 'org.sagebionetworks.repo.model.Data'})
a.executed('syn102', targetVersion=1)
usedEntities = a['used']
len(usedEntities) == 2
assert a['name'] == 'Fuzz'
assert a['description'] == 'hipster beard dataset'
## ??? are activities supposed to come back in order? Let's not count on it
used_syn101 = _find_used(a, lambda res: res['reference']['targetId'] == 'syn101')
assert used_syn101['reference']['targetVersionNumber'] == 42
assert used_syn101['wasExecuted'] == False
used_syn102 = _find_used(a, lambda res: res['reference']['targetId'] == 'syn102')
assert used_syn102['reference']['targetVersionNumber'] == 1
assert used_syn102['wasExecuted'] == True
def test_activity_used_execute_methods():
"""test activity creation and used and execute methods"""
a = Activity(name="Fuzz", description="hipster beard dataset")
a.used({"id": "syn101", "versionNumber": 42, "concreteType": "org.sagebionetworks.repo.model.FileEntity"})
a.executed("syn102", targetVersion=1)
usedEntities = a["used"]
len(usedEntities) == 2
assert a["name"] == "Fuzz"
assert a["description"] == "hipster beard dataset"
## ??? are activities supposed to come back in order? Let's not count on it
used_syn101 = _find_used(a, lambda res: res["reference"]["targetId"] == "syn101")
assert used_syn101["reference"]["targetVersionNumber"] == 42
assert used_syn101["wasExecuted"] == False
used_syn102 = _find_used(a, lambda res: res["reference"]["targetId"] == "syn102")
assert used_syn102["reference"]["targetVersionNumber"] == 1
assert used_syn102["wasExecuted"] == True
def test_activity_used_url():
"""test activity creation with UsedURLs"""
u1 = 'http://xkcd.com'
u2 = {'name': 'The Onion', 'url': 'http://theonion.com'}
u3 = {'name': 'Seriously advanced code',
'url': 'https://github.com/cbare/Pydoku/blob/ef88069f70823808f3462410e941326ae7ffbbe0/solver.py',
'wasExecuted': True}
u4 = {'name': 'Heavy duty algorithm', 'url': 'https://github.com/cbare/Pydoku/blob/master/solver.py'}
a = Activity(name='Foobarbat', description='Apply foo to a bar and a bat', used=[u1, u2, u3], executed=[u3, u4])
a.executed(url='http://cran.r-project.org/web/packages/glmnet/index.html', name='glm.net')
a.used(url='http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day', name='earthquakes')
u = _find_used(a, lambda res: 'url' in res and res['url'] == u1)
assert_is_not_none(u)
assert_equals(u['url'], u1)
assert_false(u['wasExecuted'])
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'The Onion')
assert_is_not_none(u)
assert_equals(u['url'], 'http://theonion.com')
assert_false(u['wasExecuted'])
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'Seriously advanced code')
assert_is_not_none(u)
assert_equals(u['url'], u3['url'])
assert_equals(u['wasExecuted'], u3['wasExecuted'])
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'Heavy duty algorithm')
assert_is_not_none(u)
assert_equals(u['url'], u4['url'])
assert_true(u['wasExecuted'])
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'glm.net')
assert_is_not_none(u)
assert_equals(u['url'], 'http://cran.r-project.org/web/packages/glmnet/index.html')
assert_true(u['wasExecuted'])
u = _find_used(a, lambda res: 'name' in res and res['name'] == 'earthquakes')
assert_is_not_none(u)
assert_equals(u['url'], 'http://earthquake.usgs.gov/earthquakes/feed/geojson/2.5/day')
assert_false(u['wasExecuted'])
def test_activity_used_execute_methods():
"""test activity creation and used and execute methods"""
a = Activity(name='Fuzz', description='hipster beard dataset')
a.used({
'id': 'syn101',
'versionNumber': 42,
'concreteType': 'org.sagebionetworks.repo.model.FileEntity'
})
a.executed('syn102', targetVersion=1)
usedEntities = a['used']
len(usedEntities), 2
assert_equals(a['name'], 'Fuzz')
assert_equals(a['description'], 'hipster beard dataset')
used_syn101 = _find_used(
a, lambda res: res['reference']['targetId'] == 'syn101')
assert_equals(used_syn101['reference']['targetVersionNumber'], 42)
assert_false(used_syn101['wasExecuted'])
used_syn102 = _find_used(
a, lambda res: res['reference']['targetId'] == 'syn102')
assert_equals(used_syn102['reference']['targetVersionNumber'], 1)
assert_true(used_syn102['wasExecuted'])
