Example #1
0
    def _g_create_common(self, expectedrows):
        """Create a new array in file (common part)."""

        self._v_version = obversion

        if self._v_chunkshape is None:
            # Compute the optimal chunk size
            self._v_chunkshape = self._calc_chunkshape(
                expectedrows, self.rowsize, self.atom.size)
        # Compute the optimal nrowsinbuf
        self.nrowsinbuf = self._calc_nrowsinbuf()
        # Correct the byteorder if needed
        if self.byteorder is None:
            self.byteorder = correct_byteorder(self.atom.type, sys.byteorder)

        try:
            # ``self._v_objectid`` needs to be set because would be
            # needed for setting attributes in some descendants later
            # on
            self._v_objectid = self._create_carray(self._v_new_title)
        except:  # XXX
            # Problems creating the Array on disk. Close node and re-raise.
            self.close(flush=0)
            raise

        return self._v_objectid
Example #2
0
    def _g_create_common(self, expectedrows):
        """Create a new array in file (common part)."""

        self._v_version = obversion

        if self._v_chunkshape is None:
            # Compute the optimal chunk size
            self._v_chunkshape = self._calc_chunkshape(expectedrows,
                                                       self.rowsize,
                                                       self.atom.size)
        # Compute the optimal nrowsinbuf
        self.nrowsinbuf = self._calc_nrowsinbuf()
        # Correct the byteorder if needed
        if self.byteorder is None:
            self.byteorder = correct_byteorder(self.atom.type, sys.byteorder)

        try:
            # ``self._v_objectid`` needs to be set because would be
            # needed for setting attributes in some descendants later
            # on
            self._v_objectid = self._create_carray(self._v_new_title)
        except:  # XXX
            # Problems creating the Array on disk. Close node and re-raise.
            self.close(flush=0)
            raise

        return self._v_objectid
Example #3
0
    def _g_create(self):
        """Create a variable length array (ragged array)."""

        atom = self.atom
        self._v_version = obversion
        # Check for zero dims in atom shape (not allowed in VLArrays)
        zerodims = numpy.sum(numpy.array(atom.shape) == 0)
        if zerodims > 0:
            raise ValueError, \
"""When creating VLArrays, none of the dimensions of the Atom instance can
be zero."""

        if not hasattr(atom, 'size'):  # it is a pseudo-atom
            self._atomicdtype = atom.base.dtype
            self._atomicsize = atom.base.size
            self._basesize = atom.base.itemsize
        else:
            self._atomicdtype = atom.dtype
            self._atomicsize = atom.size
            self._basesize = atom.itemsize
        self._atomictype = atom.type
        self._atomicshape = atom.shape

        # Compute the optimal chunkshape, if needed
        if self._v_chunkshape is None:
            self._v_chunkshape = self._calc_chunkshape(
                self._v_expectedsizeinMB)
        self.nrows = SizeType(0)  # No rows at creation time

        # Correct the byteorder if needed
        if self.byteorder is None:
            self.byteorder = correct_byteorder(atom.type, sys.byteorder)

        # After creating the vlarray, ``self._v_objectID`` needs to be
        # set because it is needed for setting attributes afterwards.
        self._v_objectID = self._createArray(self._v_new_title)

        # Add an attribute in case we have a pseudo-atom so that we
        # can retrieve the proper class after a re-opening operation.
        if not hasattr(atom, 'size'):  # it is a pseudo-atom
            self.attrs.PSEUDOATOM = atom.kind

        return self._v_objectID
Example #4
0
    def _g_create(self):
        """Create a variable length array (ragged array)."""

        atom = self.atom
        self._v_version = obversion
        # Check for zero dims in atom shape (not allowed in VLArrays)
        zerodims = numpy.sum(numpy.array(atom.shape) == 0)
        if zerodims > 0:
            raise ValueError, \
"""When creating VLArrays, none of the dimensions of the Atom instance can
be zero."""

        if not hasattr(atom, 'size'):  # it is a pseudo-atom
            self._atomicdtype = atom.base.dtype
            self._atomicsize = atom.base.size
            self._basesize = atom.base.itemsize
        else:
            self._atomicdtype = atom.dtype
            self._atomicsize = atom.size
            self._basesize = atom.itemsize
        self._atomictype = atom.type
        self._atomicshape = atom.shape

        # Compute the optimal chunkshape, if needed
        if self._v_chunkshape is None:
            self._v_chunkshape = self._calc_chunkshape(
                self._v_expectedsizeinMB)
        self.nrows = SizeType(0)     # No rows at creation time

        # Correct the byteorder if needed
        if self.byteorder is None:
            self.byteorder = correct_byteorder(atom.type, sys.byteorder)

        # After creating the vlarray, ``self._v_objectID`` needs to be
        # set because it is needed for setting attributes afterwards.
        self._v_objectID = self._createArray(self._v_new_title)

        # Add an attribute in case we have a pseudo-atom so that we
        # can retrieve the proper class after a re-opening operation.
        if not hasattr(atom, 'size'):  # it is a pseudo-atom
            self.attrs.PSEUDOATOM = atom.kind

        return self._v_objectID