def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam('Time valve center',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.03,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct','on_next_correct',
'only_if_correct','simulated'],
value=3,group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=0,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam('Mean delay to target',value=0.3,
units='s',group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam('+/-',value=0.05,
units='s',group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to target',value=0.3,
units='s',group='Timing parameters',
enabled=False,decimals=3)
self.params['targetDuration'] = paramgui.NumericParam('Target duration',value=0.1,
units='s',group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward availability',value=4,
units='s',group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam('Punishment (early)',value=0,
units='s',group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
self.params['trialsPerBlock'] = paramgui.NumericParam('Trials per block',value=300,
units='trials (0=no-switch)',
group='Switching parameters')
self.params['currentBlock'] = paramgui.MenuParam('Current block',
['mid_boundary','low_boundary','high_boundary'],
value=0,group='Switching parameters')
switchingParams = self.params.layout_group('Switching parameters')
self.params['psycurveMode'] = paramgui.MenuParam('PsyCurve Mode',
['off','uniform'],
value=0,group='Psychometric parameters')
psychometricParams = self.params.layout_group('Psychometric parameters')
self.params['automationMode'] = paramgui.MenuParam('Automation Mode',
['off','increase_delay'],
value=0,group='Automation')
automationParams = self.params.layout_group('Automation')
# 5000, 7000, 9800 (until 2014-03-19)
self.params['highFreq'] = paramgui.NumericParam('High freq',value=16000,
units='Hz',group='Sound parameters')
self.params['midFreq'] = paramgui.NumericParam('Middle freq',value=7000,
units='Hz',group='Sound parameters')
self.params['lowFreq'] = paramgui.NumericParam('Low freq',value=3000,
units='Hz',group='Sound parameters')
self.params['targetFrequency'] = paramgui.NumericParam('Target freq',value=0,
units='Hz',enabled=False,group='Sound parameters')
self.params['targetIntensityMode'] = paramgui.MenuParam('Intensity mode',
['fixed','randMinus20'],
value=1,group='Sound parameters')
self.params['targetMaxIntensity'] = paramgui.NumericParam('Max intensity',value=60,
units='dB-SPL',group='Sound parameters')
self.params['targetIntensity'] = paramgui.NumericParam('Intensity',value=0.0,units='dB-SPL',
enabled=False,group='Sound parameters')
'''
self.params['targetAmplitudeHigh'] = paramgui.NumericParam('AmplitudeHigh',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['targetAmplitudeMid'] = paramgui.NumericParam('AmplitudeMid',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['targetAmplitudeLow'] = paramgui.NumericParam('AmplitudeLow',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
'''
self.params['targetAmplitude'] = paramgui.NumericParam('Target amplitude',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['punishSoundAmplitude'] = paramgui.NumericParam('Punish amplitude',value=0.01,
units='[0-1]',enabled=False,
group='Sound parameters')
'''
self.params['highFreq'] = paramgui.NumericParam('High freq',value=500,
units='Hz',group='Sound parameters')
self.params['midFreq'] = paramgui.NumericParam('Middle freq',value=440,
units='Hz',group='Sound parameters')
self.params['lowFreq'] = paramgui.NumericParam('Low freq',value=400,
units='Hz',group='Sound parameters')
#4200, 9200, 20200
'''
soundParams = self.params.layout_group('Sound parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(switchingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(psychometricParams)
layoutCol3.addStretch()
layoutCol4.addWidget(automationParams)
layoutCol3.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol3.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# -- Define first block --
import datetime
if (datetime.datetime.now().day%2):
self.params['currentBlock'].set_string('low_boundary')
else:
self.params['currentBlock'].set_string('high_boundary')
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
# -- Connect to sound server and define sounds --
print 'Conecting to soundserver...'
print '***** FIXME: HARDCODED TIME DELAY TO WAIT FOR SERIAL PORT! *****' ### DEBUG
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
'''
highFreq = self.params['highFreq'].get_value()
lowFreq = self.params['lowFreq'].get_value()
stimDur = self.params['targetDuration'].get_value()
s1 = {'type':'tone', 'frequency':lowFreq, 'duration':stimDur, 'amplitude':0.01}
s2 = {'type':'tone', 'frequency':highFreq, 'duration':stimDur, 'amplitude':0.01}
self.soundClient.set_sound(1,s1)
self.soundClient.set_sound(2,s2)
'''
punishSoundAmplitude = self.params['punishSoundAmplitude'].get_value()
sNoise = {'type':'noise', 'duration':0.5, 'amplitude':punishSoundAmplitude}
self.punishSoundID = 127
self.soundClient.set_sound(self.punishSoundID,sNoise)
self.soundClient.start()
def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.03,enabled=False,
units='s',group='Water delivery')
self.params['baseWaterValveL'] = paramgui.NumericParam('Base time left',value=0.03,
units='s',group='Water delivery')
self.params['factorWaterValveL'] = paramgui.NumericParam('Factor left',value=1,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.03,enabled=False,
units='s',group='Water delivery')
self.params['baseWaterValveR'] = paramgui.NumericParam('Base time right',value=0.03,
units='s',group='Water delivery')
self.params['factorWaterValveR'] = paramgui.NumericParam('Factor right',value=1,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct','on_next_correct',
'only_if_correct','simulated'],
value=3,group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=0,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam('Mean delay to target',value=0.04,
units='s',group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam('+/-',value=0.0,
units='s',group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to target',value=0.3,
units='s',group='Timing parameters',
enabled=False,decimals=3)
self.params['targetDuration'] = paramgui.NumericParam('Target duration',value=0.5,
units='s',group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward availability',value=4,
units='s',group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
self.params['automationMode'] = paramgui.MenuParam('Automation Mode',
['off','increase_delay','same_left_right','same_right_left','left_right_left'],
value=0,group='Automation')
automationParams = self.params.layout_group('Automation')
self.params['threshMode'] = paramgui.MenuParam('Threshold Mode',
['max_only','linear','exponential'],
value=0,group='Threshold detection parameters')
# -- tone intensity refers to difference between tone and masking noise --
self.params['minSNR'] = paramgui.NumericParam('Minimum signal to noise',value=2, decimals=1,
units='dB',group='Threshold detection parameters')
self.params['maxSNR'] = paramgui.NumericParam('Maximum signal to noise',value=20,decimals=0,
units='dB',group='Threshold detection parameters')
self.params['numSNRs'] = paramgui.NumericParam('Number of SNRs', value=2, decimals=0, units='dB', group='Threshold detection parameters')
threshParams = self.params.layout_group('Threshold detection parameters')
self.params['bandMode'] = paramgui.MenuParam('Bandwidth Mode', ['white_only', 'max_only', 'uniform'], value=0, group='Bandwidth parameters')
self.params['minBand'] = paramgui.NumericParam('Minimum bandwidth',value=0.25,decimals=2,
units='octaves',group='Bandwidth parameters')
self.params['maxBand'] = paramgui.NumericParam('Maximum bandwidth',value=4.0,decimals=2,
units='octaves',group='Bandwidth parameters')
self.params['numBands'] = paramgui.NumericParam('Number of bandwidths',
value=5, decimals=0, group='Bandwidth parameters')
self.params['includeWhite'] = paramgui.MenuParam('Include white noise?', ['yes', 'no'], value=0, group='Bandwidth parameters')
bandParams = self.params.layout_group('Bandwidth parameters')
self.params['noiseMode'] = paramgui.MenuParam('Masker amplitude mode', ['max_only', 'uniform'], value=1, group='Masker amplitude parameters')
# -- power refers to average power of noise stimulus
self.params['minNoiseAmp'] = paramgui.NumericParam('Minimum noise power',value=30,decimals=0,
units='dB',group='Masker amplitude parameters')
self.params['maxNoiseAmp'] = paramgui.NumericParam('Maximum noise power',value=40,decimals=0,
units='dB',group='Masker amplitude parameters')
self.params['numAmps'] = paramgui.NumericParam('Number of noise amplitudes',
value=2, decimals=0, group='Masker amplitude parameters')
noiseParams = self.params.layout_group('Masker amplitude parameters')
self.params['toneFreq'] = paramgui.NumericParam('Tone frequency',value=8000,
units='Hz',group='Sound parameters')
self.params['modRate'] = paramgui.NumericParam('Modulation Rate',value=8,
units='Hz',group='Sound parameters')
soundParams = self.params.layout_group('Sound parameters')
self.params['currentBand'] = paramgui.NumericParam('Trial bandwidth',value=0.0,decimals=2,
units='octaves', enabled=False, group='Current Trial')
self.params['currentNoiseAmp'] = paramgui.NumericParam('Trial noise power',value=0.0,decimals=0,
units='dB', enabled=False, group='Current Trial')
self.params['currentSNR'] = paramgui.NumericParam('Trial SNR',value=0.0,decimals=1,
units='dB', enabled=False, group='Current Trial')
self.params['laserTrialType'] = paramgui.MenuParam('Laser trial type',
['no_laser','laser_onset1','laser_onset2',
'laser_onset3'],
value=0, enabled=False, group='Current Trial')
self.params['laserSide'] = paramgui.MenuParam('Laser side', ['none', 'left', 'right', 'bilateral'],
value=0, enabled=False, group='Current Trial')
self.params['laserOnset'] = paramgui.NumericParam('Trial laser onset',value=0.0,decimals=1,
units='s', enabled=False, group='Current Trial')
trialParams = self.params.layout_group('Current Trial')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
# Photostim params
self.params['laserDuration'] = paramgui.NumericParam('Laser duration',value=0.5,
units='s',group='Laser Stimulation')
self.params['laserOnsetFromSoundOnset1'] = paramgui.NumericParam('Laser onset 1 (from sound)',value=-0.1,
units='s',group='Laser Stimulation')
self.params['laserOnsetFromSoundOnset2'] = paramgui.NumericParam('Laser onset 2 (from sound)',value=0,
units='s',group='Laser Stimulation')
self.params['laserOnsetFromSoundOnset3'] = paramgui.NumericParam('Laser onset 3 (from sound)',value=0.1,
units='s',group='Laser Stimulation')
self.params['nOnsetsToUse'] = paramgui.MenuParam('Number of onsets to use',
['0','1','2','3'],
value=1, group='Laser Stimulation')
# -- Percent trials each laser type. Remaining trials will be no laser.
self.params['fractionTrialsLaser'] = paramgui.NumericParam('Fraction trials with laser',value=0.25,
units='',group='Laser Stimulation')
self.params['stimMode'] = paramgui.MenuParam('Stimulation Mode',
['unilateral_left','unilateral_right', 'bilateral', 'mixed_unilateral', 'mixed_all'],
value=2,group='Laser Stimulation')
photostimParams = self.params.layout_group('Laser Stimulation')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol2.addWidget(automationParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(photostimParams)
layoutCol3.addStretch()
layoutCol3.addWidget(trialParams)
layoutCol3.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol4.addStretch()
layoutCol4.addWidget(threshParams)
layoutCol4.addStretch()
layoutCol4.addWidget(bandParams)
layoutCol4.addStretch()
layoutCol4.addWidget(noiseParams)
layoutCol4.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
# -- Connect to sound server and define sounds --
print 'Conecting to soundserver...'
print '***** FIXME: HARDCODED TIME DELAY TO WAIT FOR SERIAL PORT! *****' ### DEBUG
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
self.soundClient.start()
# -- Specify state matrix with extratimer --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='ready_next_trial',
extratimers=['laserTimer'])
def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
self.name = 'lightDiscrim'
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam('Time valve center',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.03,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct','on_next_correct',
'only_if_correct','simulated', 'if_correct_leave_on'],
value=3,group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=0,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam('Mean delay to target',value=0.2,
units='s',group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam('+/-',value=0.05,
units='s',group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to target',value=0.3,
units='s',group='Timing parameters',
enabled=False,decimals=3)
self.params['targetDuration'] = paramgui.NumericParam('Target duration',value=0.2,
units='s',group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward availability',value=4,
units='s',group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam('Punishment (early)',value=0,
units='s',group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
'''
self.params['trialsPerBlock'] = paramgui.NumericParam('Trials per block',value=300,
units='trials (0=no-switch)',
group='Switching parameters')
self.params['currentBlock'] = paramgui.MenuParam('Current block',
['mid_boundary','low_boundary','high_boundary'],
value=0,group='Switching parameters')
switchingParams = self.params.layout_group('Switching parameters')
'''
self.params['automationMode'] = paramgui.MenuParam('Automation Mode',
['off','increase_delay'],
value=0,group='Automation')
automationParams = self.params.layout_group('Automation')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
#layoutCol3.addWidget(switchingParams)
#layoutCol3.addStretch()
#layoutCol3.addWidget(psychometricParams)
#layoutCol3.addStretch()
layoutCol3.addWidget(automationParams)
layoutCol3.addStretch()
#layoutCol4.addWidget(soundParams)
#layoutCol3.addStretch()
layoutCol3.addWidget(reportParams)
layoutCol3.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
'''
# -- Define first block --
import datetime
if (datetime.datetime.now().day%2):
self.params['currentBlock'].set_string('low_boundary')
else:
self.params['currentBlock'].set_string('high_boundary')
'''
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam('Time valve center',value=0.03,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.03,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct','on_next_correct',
'only_if_correct','simulated'],
value=3,group='Choice parameters')
self.params['allowEarlyWithdrawal'] = paramgui.MenuParam('Allow early withdraw',
['off','on'], enabled=False,
value=1, group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=0,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam('Mean delay to target',value=0.3,
units='s',group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam('+/-',value=0.05,
units='s',group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to target',value=0.3,
units='s',group='Timing parameters',
enabled=False,decimals=3)
self.params['targetDuration'] = paramgui.NumericParam('Target duration',value=0.1,
units='s',group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward availability',value=4,
units='s',group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam('Punishment (early)',value=0,
units='s',group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
'''
self.params['trialsPerBlock'] = paramgui.NumericParam('Trials per block',value=300,
units='trials (0=no-switch)',
group='Switching parameters')
self.params['currentBlock'] = paramgui.MenuParam('Current block',
['mid_boundary','low_boundary','high_boundary'],
value=0,group='Switching parameters')
switchingParams = self.params.layout_group('Switching parameters')
'''
self.params['psycurveMode'] = paramgui.MenuParam('PsyCurve Mode',
['off','uniform','extreme80pc'],
value=0,group='Psychometric parameters')
#self.params['psycurveNfreq'] = paramgui.NumericParam('N frequencies',value=8,decimals=0,
# group='Psychometric parameters')
psychometricParams = self.params.layout_group('Psychometric parameters')
self.params['relevantFeature'] = paramgui.MenuParam('Relevant feature',
['spectral','temporal'],
value=0,group='Categorization parameters')
self.params['soundActionMode'] = paramgui.MenuParam('Sound-action mode',
['low_left','high_left'],
value=0,group='Categorization parameters')
categorizationParams = self.params.layout_group('Categorization parameters')
self.params['automationMode'] = paramgui.MenuParam('Automation Mode',
['off','increase_delay'],
value=0,group='Automation')
automationParams = self.params.layout_group('Automation')
# -- In this version the laser is set to last as long as the target --
self.params['laserMode'] = paramgui.MenuParam('Laser mode',
['none','bilateral'],
value=0, group='Photostimulation parameters')
self.params['laserTrial'] = paramgui.MenuParam('Laser trial', ['no','yes'],
value=0, enabled=False,
group='Photostimulation parameters')
self.params['laserOnset'] = paramgui.NumericParam('Laser onset (from sound)',value=0.0,
enabled=False,
units='s',group='Photostimulation parameters')
self.params['laserDuration'] = paramgui.NumericParam('Laser duration',value=0.4, enabled=True,
units='s',group='Photostimulation parameters')
# -- Percent trials with laser. Remaining trials will be no laser.
self.params['fractionLaserTrials'] = paramgui.NumericParam('Fraction trials with laser',value=0.25,
units='',group='Photostimulation parameters')
photostimParams = self.params.layout_group('Photostimulation parameters')
# 5000, 7000, 9800 (until 2014-03-19)
'''
self.params['highFreq'] = paramgui.NumericParam('High freq',value=5000,
units='Hz',group='Sound parameters')
self.params['lowFreq'] = paramgui.NumericParam('Low freq',value=3000,
units='Hz',group='Sound parameters')
self.params['targetFrequency'] = paramgui.NumericParam('Target freq',value=0,decimals=0,
units='Hz',enabled=False,group='Sound parameters')
'''
self.params['targetFrequency'] = paramgui.NumericParam('Target percentage',value=0,decimals=0,
units='percentage',enabled=False,group='Sound parameters')
self.params['targetIntensityMode'] = paramgui.MenuParam('Intensity mode',
['fixed','randMinus20'],
value=0,group='Sound parameters')
# This intensity corresponds to the intensity of each component of the chord
self.params['targetMaxIntensity'] = paramgui.NumericParam('Max intensity',value=70,
units='dB-SPL',group='Sound parameters')
self.params['targetIntensity'] = paramgui.NumericParam('Intensity',value=0.0,units='dB-SPL',
enabled=False,group='Sound parameters')
self.params['targetAmplitude'] = paramgui.NumericParam('Target amplitude',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['punishSoundIntensity'] = paramgui.NumericParam('Punish intensity',value=50,
units='dB-SPL',enabled=True,
group='Sound parameters')
self.params['punishSoundAmplitude'] = paramgui.NumericParam('Punish amplitude',value=0.01,
units='[0-1]',enabled=False,
group='Sound parameters')
soundParams = self.params.layout_group('Sound parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(psychometricParams)
layoutCol3.addStretch()
layoutCol3.addWidget(categorizationParams)
layoutCol3.addStretch()
layoutCol3.addWidget(automationParams)
layoutCol3.addStretch()
layoutCol4.addWidget(photostimParams)
layoutCol4.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol4.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# Saving outcome as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
# -- Load speaker calibration --
self.spkCal = speakercalibration.Calibration(rigsettings.SPEAKER_CALIBRATION_CHORD)
self.spkNoiseCal = speakercalibration.NoiseCalibration(rigsettings.SPEAKER_CALIBRATION_NOISE)
# -- Connect to sound server and define sounds --
print('Conecting to soundserver (waiting for 200ms) ...')
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
self.soundClient.start()
# -- Prepare sounds --
self.punishSoundID = 100
#self.targetSoundID = {'leftSpectral':1, 'rightSpectral':2,
# 'leftTemporal':3, 'rightTemporal':4}
self.targetSoundID = {'spectral000':1, 'spectral020':2, 'spectral040':3,
'spectral060':4, 'spectral080':5, 'spectral100':6,
'temporal000':11, 'temporal020':12, 'temporal040':13,
'temporal060':14, 'temporal080':15, 'temporal100':16}
self.currentSoundID = None
# -- Specify state matrix with extratimer --
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='readyForNextTrial',
extratimers=['laserTimer'])
def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.02,
units='s',group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam('Time valve center',value=0.02,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.02,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
###['sides direct','direct','on next correct','only if correct'],
###['sidesDirect','direct','onNextCorrect','onlyIforrect'],
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct',
'on_next_correct','only_if_correct'],
value=3,group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=1,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to Target',value=0.1,
units='s',group='Timing Parameters')
self.params['targetDuration'] = paramgui.NumericParam('Target Duration',value=0.1,
units='s',group='Timing Parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward Availability',value=4,
units='s',group='Timing Parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing Parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam('Punishment (early)',value=0,
units='s',group='Timing Parameters')
timingParams = self.params.layout_group('Timing Parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addWidget(waterDelivery)
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(
nTrials=400, winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam(
'Time valve left', value=0.03, units='s', group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam(
'Time valve center', value=0.03, units='s', group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam(
'Time valve right', value=0.03, units='s', group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam(
'Outcome mode', [
'sides_direct', 'direct', 'on_next_correct', 'only_if_correct',
'simulated'
],
value=3,
group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam(
'Anti-bias mode', ['off', 'repeat_mistake'],
value=0,
group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam(
'Mean delay to target',
value=0.3,
units='s',
group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam(
'+/-', value=0.05, units='s', group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam(
'Delay to target',
value=0.3,
units='s',
group='Timing parameters',
enabled=False,
decimals=3)
self.params['targetDuration'] = paramgui.NumericParam(
'Target duration', value=0.1, units='s', group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam(
'Reward availability',
value=4,
units='s',
group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam(
'Punishment (error)',
value=0,
units='s',
group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam(
'Punishment (early)',
value=0,
units='s',
group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
self.params['trialsPerBlock'] = paramgui.NumericParam(
'Trials per block',
value=300,
units='trials (0=no-switch)',
group='Switching parameters')
self.params['currentBlock'] = paramgui.MenuParam(
'Current block', ['mid_boundary', 'low_boundary', 'high_boundary'],
value=0,
group='Switching parameters')
switchingParams = self.params.layout_group('Switching parameters')
self.params['psycurveMode'] = paramgui.MenuParam(
'PsyCurve Mode', ['off', 'uniform'],
value=0,
group='Psychometric parameters')
self.params['psycurveNfreq'] = paramgui.NumericParam(
'N frequencies',
value=8,
decimals=0,
group='Psychometric parameters')
psychometricParams = self.params.layout_group(
'Psychometric parameters')
self.params['automationMode'] = paramgui.MenuParam(
'Automation Mode', ['off', 'increase_delay'],
value=0,
group='Automation')
automationParams = self.params.layout_group('Automation')
# 5000, 7000, 9800 (until 2014-03-19)
self.params['highFreq'] = paramgui.NumericParam(
'High freq', value=16000, units='Hz', group='Sound parameters')
self.params['midFreq'] = paramgui.NumericParam(
'Middle freq', value=7000, units='Hz', group='Sound parameters')
self.params['lowFreq'] = paramgui.NumericParam(
'Low freq', value=3000, units='Hz', group='Sound parameters')
self.params['targetFrequency'] = paramgui.NumericParam(
'Target freq',
value=0,
decimals=0,
units='Hz',
enabled=False,
group='Sound parameters')
self.params['targetIntensityMode'] = paramgui.MenuParam(
'Intensity mode', ['fixed', 'randMinus20'],
value=1,
group='Sound parameters')
self.params['targetMaxIntensity'] = paramgui.NumericParam(
'Max intensity',
value=60,
units='dB-SPL',
group='Sound parameters')
self.params['targetIntensity'] = paramgui.NumericParam(
'Intensity',
value=0.0,
units='dB-SPL',
enabled=False,
group='Sound parameters')
'''
self.params['targetAmplitudeHigh'] = paramgui.NumericParam('AmplitudeHigh',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['targetAmplitudeMid'] = paramgui.NumericParam('AmplitudeMid',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['targetAmplitudeLow'] = paramgui.NumericParam('AmplitudeLow',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
'''
self.params['targetAmplitude'] = paramgui.NumericParam(
'Target amplitude',
value=0.0,
units='[0-1]',
enabled=False,
decimals=4,
group='Sound parameters')
self.params['punishSoundAmplitude'] = paramgui.NumericParam(
'Punish amplitude',
value=0.01,
units='[0-1]',
enabled=False,
group='Sound parameters')
'''
self.params['highFreq'] = paramgui.NumericParam('High freq',value=500,
units='Hz',group='Sound parameters')
self.params['midFreq'] = paramgui.NumericParam('Middle freq',value=440,
units='Hz',group='Sound parameters')
self.params['lowFreq'] = paramgui.NumericParam('Low freq',value=400,
units='Hz',group='Sound parameters')
#4200, 9200, 20200
'''
soundParams = self.params.layout_group('Sound parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',
value=0,
units='',
enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',
value=0,
units='',
enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(switchingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(psychometricParams)
layoutCol3.addStretch()
layoutCol4.addWidget(automationParams)
layoutCol3.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol3.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left': 0, 'right': 1}
self.results['rewardSide'] = np.random.randint(2, size=maxNtrials)
self.results.labels['choice'] = {'left': 0, 'right': 1, 'none': 2}
self.results['choice'] = np.empty(maxNtrials, dtype=int)
self.results.labels['outcome'] = {
'correct': 1,
'error': 0,
'invalid': 2,
'free': 3,
'nochoice': 4,
'aftererror': 5,
'aborted': 6
}
self.results['outcome'] = np.empty(maxNtrials, dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,
dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials, dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials, dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials, dtype=float)
# -- Define first block --
import datetime
if (datetime.datetime.now().day % 2):
self.params['currentBlock'].set_string('low_boundary')
else:
self.params['currentBlock'].set_string('high_boundary')
# -- Load parameters from a file --
self.params.from_file(paramfile, paramdictname)
# -- Connect to sound server and define sounds --
print 'Conecting to soundserver...'
print '***** XFIXME: HARDCODED TIME DELAY TO WAIT FOR SERIAL PORT! *****' ### DEBUG
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
'''
highFreq = self.params['highFreq'].get_value()
lowFreq = self.params['lowFreq'].get_value()
stimDur = self.params['targetDuration'].get_value()
s1 = {'type':'tone', 'frequency':lowFreq, 'duration':stimDur, 'amplitude':0.01}
s2 = {'type':'tone', 'frequency':highFreq, 'duration':stimDur, 'amplitude':0.01}
self.soundClient.set_sound(1,s1)
self.soundClient.set_sound(2,s2)
'''
punishSoundAmplitude = self.params['punishSoundAmplitude'].get_value()
sNoise = {
'type': 'noise',
'duration': 0.5,
'amplitude': punishSoundAmplitude
}
self.punishSoundID = 127
self.soundClient.set_sound(self.punishSoundID, sNoise)
self.soundClient.start()
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(
nTrials=400, winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam(
'Time valve left', value=0.02, units='s', group='Water delivery')
self.params['timeWaterValveC'] = paramgui.NumericParam(
'Time valve center', value=0.02, units='s', group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam(
'Time valve right', value=0.02, units='s', group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
###['sides direct','direct','on next correct','only if correct'],
###['sidesDirect','direct','onNextCorrect','onlyIforrect'],
self.params['outcomeMode'] = paramgui.MenuParam(
'Outcome mode',
['sides_direct', 'direct', 'on_next_correct', 'only_if_correct'],
value=3,
group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam(
'Anti-bias mode', ['off', 'repeat_mistake'],
value=1,
group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTarget'] = paramgui.NumericParam(
'Delay to Target', value=0.1, units='s', group='Timing Parameters')
self.params['targetDuration'] = paramgui.NumericParam(
'Target Duration', value=0.1, units='s', group='Timing Parameters')
self.params['rewardAvailability'] = paramgui.NumericParam(
'Reward Availability',
value=4,
units='s',
group='Timing Parameters')
self.params['punishTimeError'] = paramgui.NumericParam(
'Punishment (error)',
value=0,
units='s',
group='Timing Parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam(
'Punishment (early)',
value=0,
units='s',
group='Timing Parameters')
timingParams = self.params.layout_group('Timing Parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',
value=0,
units='',
enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',
value=0,
units='',
enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addWidget(waterDelivery)
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left': 0, 'right': 1}
self.results['rewardSide'] = np.random.randint(2, size=maxNtrials)
self.results.labels['choice'] = {'left': 0, 'right': 1, 'none': 2}
self.results['choice'] = np.empty(maxNtrials, dtype=int)
self.results.labels['outcome'] = {
'correct': 1,
'error': 0,
'invalid': 2,
'free': 3,
'nochoice': 4,
'aftererror': 5,
'aborted': 6
}
self.results['outcome'] = np.empty(maxNtrials, dtype=int)
self.results['timeTrialStart'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials, dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials, dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile, paramdictname)
def __init__(self, parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(
nTrials=400, winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam(
'Time valve left',
value=0.03,
enabled=False,
units='s',
group='Water delivery')
self.params['baseWaterValveL'] = paramgui.NumericParam(
'Base time left', value=0.03, units='s', group='Water delivery')
self.params['factorWaterValveL'] = paramgui.NumericParam(
'Factor left', value=1, units='s', group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam(
'Time valve right',
value=0.03,
enabled=False,
units='s',
group='Water delivery')
self.params['baseWaterValveR'] = paramgui.NumericParam(
'Base time right', value=0.03, units='s', group='Water delivery')
self.params['factorWaterValveR'] = paramgui.NumericParam(
'Factor right', value=1, units='s', group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam(
'Outcome mode', [
'sides_direct', 'direct', 'on_next_correct', 'only_if_correct',
'simulated'
],
value=3,
group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam(
'Anti-bias mode', ['off', 'repeat_mistake'],
value=0,
group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam(
'Mean delay to target',
value=0.04,
units='s',
group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam(
'+/-', value=0.0, units='s', group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam(
'Delay to target',
value=0.3,
units='s',
group='Timing parameters',
enabled=False,
decimals=3)
self.params['targetDuration'] = paramgui.NumericParam(
'Target duration', value=0.5, units='s', group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam(
'Reward availability',
value=4,
units='s',
group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam(
'Punishment (error)',
value=0,
units='s',
group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam(
'Punishment (early)',
value=0,
units='s',
group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
self.params['automationMode'] = paramgui.MenuParam('Automation Mode', [
'off', 'increase_delay', 'same_left_right', 'same_right_left',
'left_right_left'
],
value=0,
group='Automation')
automationParams = self.params.layout_group('Automation')
self.params['threshMode'] = paramgui.MenuParam(
'Threshold Mode', ['max_only', 'linear', 'exponential'],
value=0,
group='Threshold detection parameters')
# -- tone intensity refers to difference between tone and masking noise --
self.params['minSNR'] = paramgui.NumericParam(
'Minimum signal to noise',
value=2,
decimals=1,
units='dB',
group='Threshold detection parameters')
self.params['maxSNR'] = paramgui.NumericParam(
'Maximum signal to noise',
value=20,
decimals=0,
units='dB',
group='Threshold detection parameters')
self.params['numSNRs'] = paramgui.NumericParam(
'Number of SNRs',
value=2,
decimals=0,
units='dB',
group='Threshold detection parameters')
threshParams = self.params.layout_group(
'Threshold detection parameters')
self.params['bandMode'] = paramgui.MenuParam(
'Bandwidth Mode', ['white_only', 'max_only', 'uniform'],
value=0,
group='Bandwidth parameters')
self.params['minBand'] = paramgui.NumericParam(
'Minimum bandwidth',
value=0.25,
decimals=2,
units='octaves',
group='Bandwidth parameters')
self.params['maxBand'] = paramgui.NumericParam(
'Maximum bandwidth',
value=4.0,
decimals=2,
units='octaves',
group='Bandwidth parameters')
self.params['numBands'] = paramgui.NumericParam(
'Number of bandwidths',
value=5,
decimals=0,
group='Bandwidth parameters')
self.params['includeWhite'] = paramgui.MenuParam(
'Include white noise?', ['yes', 'no'],
value=0,
group='Bandwidth parameters')
bandParams = self.params.layout_group('Bandwidth parameters')
self.params['noiseMode'] = paramgui.MenuParam(
'Masker amplitude mode', ['max_only', 'uniform'],
value=1,
group='Masker amplitude parameters')
# -- power refers to average power of noise stimulus
self.params['minNoiseAmp'] = paramgui.NumericParam(
'Minimum noise power',
value=30,
decimals=0,
units='dB',
group='Masker amplitude parameters')
self.params['maxNoiseAmp'] = paramgui.NumericParam(
'Maximum noise power',
value=40,
decimals=0,
units='dB',
group='Masker amplitude parameters')
self.params['numAmps'] = paramgui.NumericParam(
'Number of noise amplitudes',
value=2,
decimals=0,
group='Masker amplitude parameters')
noiseParams = self.params.layout_group('Masker amplitude parameters')
self.params['toneFreq'] = paramgui.NumericParam(
'Tone frequency', value=8000, units='Hz', group='Sound parameters')
self.params['modRate'] = paramgui.NumericParam(
'Modulation Rate', value=8, units='Hz', group='Sound parameters')
self.params['punishSoundAmplitude'] = paramgui.NumericParam(
'Punish amplitude',
value=0.01,
units='[0-1]',
enabled=True,
group='Sound parameters')
soundParams = self.params.layout_group('Sound parameters')
self.params['currentBand'] = paramgui.NumericParam(
'Trial bandwidth',
value=0.0,
decimals=2,
units='octaves',
enabled=False,
group='Current Trial')
self.params['currentNoiseAmp'] = paramgui.NumericParam(
'Trial noise power',
value=0.0,
decimals=0,
units='dB',
enabled=False,
group='Current Trial')
self.params['currentSNR'] = paramgui.NumericParam(
'Trial SNR',
value=0.0,
decimals=1,
units='dB',
enabled=False,
group='Current Trial')
trialParams = self.params.layout_group('Current Trial')
self.params['nValid'] = paramgui.NumericParam('N valid',
value=0,
units='',
enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',
value=0,
units='',
enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(automationParams)
layoutCol3.addStretch()
layoutCol3.addWidget(trialParams)
layoutCol3.addStretch()
layoutCol3.addWidget(reportParams)
layoutCol3.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol4.addStretch()
layoutCol4.addWidget(threshParams)
layoutCol4.addStretch()
layoutCol4.addWidget(bandParams)
layoutCol4.addStretch()
layoutCol4.addWidget(noiseParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left': 0, 'right': 1}
self.results['rewardSide'] = np.random.randint(2, size=maxNtrials)
self.results.labels['choice'] = {'left': 0, 'right': 1, 'none': 2}
self.results['choice'] = np.empty(maxNtrials, dtype=int)
self.results.labels['outcome'] = {
'correct': 1,
'error': 0,
'invalid': 2,
'free': 3,
'nochoice': 4,
'aftererror': 5,
'aborted': 6
}
self.results['outcome'] = np.empty(maxNtrials, dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,
dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials, dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials, dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials, dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials, dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile, paramdictname)
# -- Connect to sound server and define sounds --
print 'Conecting to soundserver...'
print '***** FIXME: HARDCODED TIME DELAY TO WAIT FOR SERIAL PORT! *****' ### DEBUG
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
self.punishSoundID = 127
self.soundClient.start()
def __init__(self,parent=None, paramfile=None, paramdictname=None):
super(Paradigm, self).__init__(parent)
# -- Performance dynamics plot --
performancedynamicsplot.set_pg_colors(self)
self.myPerformancePlot = performancedynamicsplot.PerformanceDynamicsPlot(nTrials=400,winsize=10)
# -- Add parameters --
self.params['timeWaterValveL'] = paramgui.NumericParam('Time valve left',value=0.03,enabled=False,
units='s',group='Water delivery')
self.params['baseWaterValveL'] = paramgui.NumericParam('Base time left',value=0.03,
units='s',group='Water delivery')
self.params['factorWaterValveL'] = paramgui.NumericParam('Factor left',value=1,
units='s',group='Water delivery')
self.params['timeWaterValveR'] = paramgui.NumericParam('Time valve right',value=0.03,enabled=False,
units='s',group='Water delivery')
self.params['baseWaterValveR'] = paramgui.NumericParam('Base time right',value=0.03,
units='s',group='Water delivery')
self.params['factorWaterValveR'] = paramgui.NumericParam('Factor right',value=1,
units='s',group='Water delivery')
waterDelivery = self.params.layout_group('Water delivery')
self.params['outcomeMode'] = paramgui.MenuParam('Outcome mode',
['sides_direct','direct','on_next_correct',
'only_if_correct','simulated'],
value=3,group='Choice parameters')
self.params['antibiasMode'] = paramgui.MenuParam('Anti-bias mode',
['off','repeat_mistake'],
value=0,group='Choice parameters')
choiceParams = self.params.layout_group('Choice parameters')
self.params['delayToTargetMean'] = paramgui.NumericParam('Mean delay to target',value=0.04,
units='s',group='Timing parameters')
self.params['delayToTargetHalfRange'] = paramgui.NumericParam('+/-',value=0.0,
units='s',group='Timing parameters')
self.params['delayToTarget'] = paramgui.NumericParam('Delay to target',value=0.3,
units='s',group='Timing parameters',
enabled=False,decimals=3)
self.params['targetDuration'] = paramgui.NumericParam('Target duration',value=0.5,
units='s',group='Timing parameters')
self.params['rewardAvailability'] = paramgui.NumericParam('Reward availability',value=4,
units='s',group='Timing parameters')
self.params['punishTimeError'] = paramgui.NumericParam('Punishment (error)',value=0,
units='s',group='Timing parameters')
self.params['punishTimeEarly'] = paramgui.NumericParam('Punishment (early)',value=0,
units='s',group='Timing parameters')
timingParams = self.params.layout_group('Timing parameters')
self.params['trialsPerBlock'] = paramgui.NumericParam('Trials per block',value=200,
units='trials (0=no-switch)',
group='Switching parameters')
self.params['currentBlock'] = paramgui.MenuParam('Current block',
['same_reward','more_left','more_right','more_both'],
value=0,group='Switching parameters')
switchingParams = self.params.layout_group('Switching parameters')
self.params['psycurveMode'] = paramgui.MenuParam('PsyCurve Mode',
['off','uniform'],
value=0,group='Psychometric parameters')
self.params['psycurveNfreq'] = paramgui.NumericParam('N frequencies',value=8,decimals=0,
group='Psychometric parameters')
psychometricParams = self.params.layout_group('Psychometric parameters')
self.params['laserMode'] = paramgui.MenuParam('Laser Mode',
['none', 'random'],
value=0, group='Laser parameters')
self.params['laserProbability'] = paramgui.NumericParam('Laser probability',
value=0.25, group='Laser parameters')
self.params['laserDuration'] = paramgui.NumericParam('Laser duration', value=0.5,
group='Laser parameters')
self.params['laserOn'] = paramgui.NumericParam('Laser On', value=0,
enabled=False, group='Laser parameters')
laserParams = self.params.layout_group('Laser parameters')
self.params['automationMode'] = paramgui.MenuParam('Automation Mode',
['off','increase_delay','same_left_right','same_right_left','left_right_left'],
value=0,group='Automation')
automationParams = self.params.layout_group('Automation')
# 5000, 7000, 9800 (until 2014-03-19)
self.params['highSoundFreq'] = paramgui.NumericParam('High sound freq',value=16000,
units='Hz',group='Sound parameters')
self.params['lowSoundFreq'] = paramgui.NumericParam('Low sound freq',value=5000,
units='Hz',group='Sound parameters')
self.params['highModFreq'] = paramgui.NumericParam('High mod freq',value=32,
units='Hz',group='Sound parameters')
self.params['lowModFreq'] = paramgui.NumericParam('Low mod freq',value=8,
units='Hz',group='Sound parameters')
self.params['targetFrequency'] = paramgui.NumericParam('Target freq',value=0,decimals=0,
units='Hz',enabled=False,group='Sound parameters')
self.params['targetIntensityMode'] = paramgui.MenuParam('Intensity mode',
['fixed','randMinus20'],
value=0,group='Sound parameters')
self.params['soundTypeMode'] = paramgui.MenuParam('Sound mode',
['amp_mod','tones', 'chords', 'mixed_tones', 'mixed_chords'],
value=0,group='Sound parameters')
self.params['soundType'] = paramgui.MenuParam('Sound type',
['amp_mod','tones', 'chords'],
value=0,group='Sound parameters')
# This intensity corresponds to the intensity of each component of the chord
self.params['targetMaxIntensity'] = paramgui.NumericParam('Max intensity',value=50,
units='dB-SPL',group='Sound parameters')
self.params['targetIntensity'] = paramgui.NumericParam('Intensity',value=0.0,units='dB-SPL',
enabled=False,group='Sound parameters')
self.params['targetAmplitude'] = paramgui.NumericParam('Target amplitude',value=0.0,units='[0-1]',
enabled=False,decimals=4,group='Sound parameters')
self.params['punishSoundAmplitude'] = paramgui.NumericParam('Punish amplitude',value=0.01,
units='[0-1]',enabled=True,
group='Sound parameters')
soundParams = self.params.layout_group('Sound parameters')
self.params['nValid'] = paramgui.NumericParam('N valid',value=0,
units='',enabled=False,
group='Report')
self.params['nRewarded'] = paramgui.NumericParam('N rewarded',value=0,
units='',enabled=False,
group='Report')
reportParams = self.params.layout_group('Report')
#
self.params['experimenter'].set_value('santiago')
self.params['subject'].set_value('test')
# -- Add graphical widgets to main window --
self.centralWidget = QtGui.QWidget()
layoutMain = QtGui.QVBoxLayout()
layoutTop = QtGui.QVBoxLayout()
layoutBottom = QtGui.QHBoxLayout()
layoutCol1 = QtGui.QVBoxLayout()
layoutCol2 = QtGui.QVBoxLayout()
layoutCol3 = QtGui.QVBoxLayout()
layoutCol4 = QtGui.QVBoxLayout()
layoutMain.addLayout(layoutTop)
#layoutMain.addStretch()
layoutMain.addSpacing(0)
layoutMain.addLayout(layoutBottom)
layoutTop.addWidget(self.mySidesPlot)
layoutTop.addWidget(self.myPerformancePlot)
layoutBottom.addLayout(layoutCol1)
layoutBottom.addLayout(layoutCol2)
layoutBottom.addLayout(layoutCol3)
layoutBottom.addLayout(layoutCol4)
layoutCol1.addWidget(self.saveData)
layoutCol1.addWidget(self.sessionInfo)
layoutCol1.addWidget(self.dispatcherView)
layoutCol2.addWidget(self.manualControl)
layoutCol2.addStretch()
layoutCol2.addWidget(waterDelivery)
layoutCol2.addStretch()
layoutCol2.addWidget(choiceParams)
layoutCol2.addStretch()
layoutCol3.addWidget(timingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(switchingParams)
layoutCol3.addStretch()
layoutCol3.addWidget(psychometricParams)
layoutCol3.addStretch()
layoutCol3.addWidget(laserParams)
layoutCol3.addStretch()
layoutCol4.addWidget(automationParams)
layoutCol3.addStretch()
layoutCol4.addWidget(soundParams)
layoutCol3.addStretch()
layoutCol4.addWidget(reportParams)
layoutCol4.addStretch()
self.centralWidget.setLayout(layoutMain)
self.setCentralWidget(self.centralWidget)
# -- Add variables for storing results --
maxNtrials = 4000 # Preallocating space for each vector makes things easier
self.results = arraycontainer.Container()
self.results.labels['rewardSide'] = {'left':0,'right':1}
self.results['rewardSide'] = np.random.randint(2,size=maxNtrials)
self.results.labels['choice'] = {'left':0,'right':1,'none':2}
self.results['choice'] = np.empty(maxNtrials,dtype=int)
self.results.labels['outcome'] = {'correct':1,'error':0,'invalid':2,
'free':3,'nochoice':4,'aftererror':5,'aborted':6}
self.results['outcome'] = np.empty(maxNtrials,dtype=int)
# Saving as bool creates an 'enum' vector, so I'm saving as 'int'
self.results['valid'] = np.zeros(maxNtrials,dtype='int8') # redundant but useful
self.results['timeTrialStart'] = np.empty(maxNtrials,dtype=float)
self.results['timeTarget'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterIn'] = np.empty(maxNtrials,dtype=float)
self.results['timeCenterOut'] = np.empty(maxNtrials,dtype=float)
self.results['timeSideIn'] = np.empty(maxNtrials,dtype=float)
# -- Load parameters from a file --
self.params.from_file(paramfile,paramdictname)
# -- Connect to sound server and define sounds --
print 'Conecting to soundserver...'
print '***** FIXME: HARDCODED TIME DELAY TO WAIT FOR SERIAL PORT! *****' ### DEBUG
time.sleep(0.2)
self.soundClient = soundclient.SoundClient()
'''
highFreq = self.params['highFreq'].get_value()
lowFreq = self.params['lowFreq'].get_value()
stimDur = self.params['targetDuration'].get_value()
s1 = {'type':'tone', 'frequency':lowFreq, 'duration':stimDur, 'amplitude':0.01}
s2 = {'type':'tone', 'frequency':highFreq, 'duration':stimDur, 'amplitude':0.01}
self.soundClient.set_sound(1,s1)
self.soundClient.set_sound(2,s2)
'''
'''
# This code was moved to the method prepare_punish_sound()
punishSoundAmplitude = self.params['punishSoundAmplitude'].get_value()
sNoise = {'type':'noise', 'duration':0.5, 'amplitude':punishSoundAmplitude}
self.punishSoundID = 127
self.soundClient.set_sound(self.punishSoundID,sNoise)
'''
self.punishSoundID = 127
self.soundClient.start()
# -- Specify state matrix with extratimer --
if rigsettings.OUTPUTS.has_key('stim1') and rigsettings.OUTPUTS.has_key('stim2'):
self.laserPin = ['stim1', 'stim2']
else:
self.laserPin = ['centerLED'] # Use center LED during emulation
self.sm = statematrix.StateMatrix(inputs=rigsettings.INPUTS,
outputs=rigsettings.OUTPUTS,
readystate='readyForNextTrial',
extratimers=['laserTimer', 'rewardAvailabilityTimer'])
