def main():
# Set up the environment.
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
fail = 0
# Run the individual tests.
fail += run_deviser_test('non-existent', '-g',
gv.return_codes['failed to read file'])
fail += run_deviser_test('test_child', '-g', gv.return_codes['success'])
fail += run_deviser_test('test_child', 'missing',
gv.return_codes['missing function argument'])
fail += run_deviser_test('test_child', 'wrong',
gv.return_codes['invalid function arguments'])
# TODO sort for latest python ** UPDATE 15th December 2020 this seems to work fine on Python 2 and 3.6.12
# fail += run_deviser_test('test_child', '-l',
# gv.return_codes['success'])
fail += run_deviser_test('invalid', '-g', gv.return_codes['parsing error'])
fail += run_deviser_test('invalid', '-l', gv.return_codes['parsing error'])
fail += run_deviser_test('unknown_type', '-g',
gv.return_codes['unknown type used'])
fail += run_deviser_test('unknown_error', '-g',
gv.return_codes['missing required information'])
fail += run_deviser_test('bad_lo_element', '-g',
gv.return_codes['unknown type used'])
fail += run_deviser_test('bad_concretes', '-g',
gv.return_codes['missing required information'])
test_functions.report('EXIT CODES', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# run the individual tests
name = 'spatial'
fail += run_cmake_test(name)
name = 'spatial'
fail += run_register_test(name)
name = 'spatial'
fail += run_example_test(name)
name = 'groups'
fail += run_example_test(name)
test_functions.report('CMAKE', fail, fails, not_tested)
return fail
def main():
"""
Main function. Set up and run all tests.
"""
# Set up the environment.
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# Run the individual tests. TODO Consider using a pytest fixture.
name = 'spatial'
fail += run_cmake_test(name)
name = 'spatial'
fail += run_register_test(name)
name = 'spatial'
fail += run_example_test(name)
name = 'groups'
fail += run_example_test(name)
test_functions.report('CMAKE', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# run the individual tests
# name = 'qual'
# test_case = 'validation'
# fail += run_test(name, test_case)
#
# name = 'groups'
# test_case = 'macros'
# fail += run_test(name, test_case)
#
# name = 'groups'
# test_case = 'validation'
# fail += run_test(name, test_case)
#
# name = 'groups'
# test_case = 'body'
# fail += run_test(name, test_case)
#
# name = 'unknown_type'
# test_case = 'validation'
# fail += run_test(name, test_case)
#
# name = 'test_sidrefs'
# test_case = 'validation'
# fail += run_test(name, test_case)
#
# name = 'test_sidrefs'
# test_case = 'body'
# fail += run_test(name, test_case)
#
# name = 'test_lists'
# test_case = 'validation'
# fail += run_test(name, test_case)
#
# name = 'test_lists'
# test_case = 'body'
# fail += run_test(name, test_case)
# run the individual tests
name = 'test_att'
test_case = 'validation'
fail += run_test(name, test_case)
# write summary
test_functions.report('TEX', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
fail = 0
# run the individual tests
fail += run_deviser_test('non-existent', '-g',
global_variables.
return_codes['failed to read file'])
fail += run_deviser_test('non-existent', '-l',
global_variables.
return_codes['failed to read file'])
fail += run_deviser_test('test_child', '-g',
global_variables.
return_codes['success'])
fail += run_deviser_test('test_child', 'missing',
global_variables.
return_codes['missing function argument'])
fail += run_deviser_test('test_child', 'wrong',
global_variables.
return_codes['invalid function arguments'])
fail += run_deviser_test('test_child', '-l',
global_variables.
return_codes['success'])
fail += run_deviser_test('invalid', '-g',
global_variables.
return_codes['parsing error'])
fail += run_deviser_test('invalid', '-l',
global_variables.
return_codes['parsing error'])
fail += run_deviser_test('unknown_type', '-g',
global_variables.
return_codes['unknown type used'])
fail += run_deviser_test('unknown_error', '-g',
global_variables.
return_codes['missing required information'])
fail += run_deviser_test('bad_lo_element', '-g',
global_variables.
return_codes['unknown type used'])
fail += run_deviser_test('bad_concretes', '-g',
global_variables.
return_codes['missing required information'])
test_functions.report('EXIT CODES', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# run the individual tests
name = 'qual'
fail += run_matlab_test(name)
test_functions.report('matlab', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
fail = 0
# run the individual tests
fail += run_deviser_test('non-existent', '-g',
global_variables.
return_codes['failed to read file'])
fail += run_deviser_test('non-existent', '-l',
global_variables.
return_codes['failed to read file'])
fail += run_deviser_test('test_child', '-g',
global_variables.
return_codes['success'])
fail += run_deviser_test('test_child', 'missing',
global_variables.
return_codes['missing function argument'])
fail += run_deviser_test('test_child', 'wrong',
global_variables.
return_codes['invalid function arguments'])
fail += run_deviser_test('test_child', '-l',
global_variables.
return_codes['success'])
fail += run_deviser_test('invalid', '-g',
global_variables.
return_codes['parsing error'])
fail += run_deviser_test('invalid', '-l',
global_variables.
return_codes['parsing error'])
fail += run_deviser_test('unknown_type', '-g',
global_variables.
return_codes['unknown type used'])
fail += run_deviser_test('unknown_error', '-g',
global_variables.
return_codes['missing required information'])
test_functions.report('EXIT CODES', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# run the individual tests
name = 'spatial'
fail += run_cmake_test(name)
name = 'spatial'
fail += run_register_test(name)
test_functions.report('CMAKE', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# run the individual tests
name = 'spatial'
test_case = 'csharp'
ext = 'i'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'perl'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'php'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'python'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'r'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'csharp'
ext = 'i'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'perl'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'php'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'python'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'r'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_pkgs_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_plugin_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_pkgs_test(name, test_case, ext)
name = 'spatial'
test_case = 'csharp'
ext = 'i'
fail += run_local_test(name, test_case, ext, False)
name = 'spatial'
test_case = 'php'
ext = 'i'
fail += run_local_test(name, test_case, ext, True)
name = 'spatial'
test_case = 'swig'
ext = 'i'
fail += run_swig_test(name, test_case, ext)
name = 'spatial'
test_case = 'swig'
ext = 'h'
fail += run_swig_test(name, test_case, ext)
name = 'qual'
test_case = 'javascript'
ext = 'cpp'
fail += run_plugin_test(name, test_case, ext)
test_functions.report('BINDINGS', fail, fails, not_tested)
return fail
def main():
# Set up the environment.
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, _) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
run_all = True
if run_all:
# run the individual tests
# TODO Using pytest parameterization would be good here.
name = 'spatial'
test_case = 'csharp'
ext = 'i'
# my_tuple = ('spatial', 'csharp', 'i')
# fail += run_test(my_tuple[0], my_tuple[1], my_tuple[2])
# fail += run_test(name=my_tuple[0], binding=my_tuple[1], ext=my_tuple[2])
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'perl'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'php'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'python'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'r'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_test(name, test_case, ext)
name = 'spatial'
test_case = 'csharp'
ext = 'i'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'perl'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'php'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'python'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'r'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_ns_test(name, test_case, ext)
name = 'spatial'
test_case = 'javascript'
ext = 'cpp'
fail += run_pkgs_test(name, test_case, ext)
name = 'spatial'
test_case = 'ruby'
ext = 'cpp'
fail += run_plugin_test(name, test_case, ext)
name = 'spatial'
test_case = 'java'
ext = 'i'
fail += run_pkgs_test(name, test_case, ext)
name = 'spatial'
test_case = 'csharp'
ext = 'i'
fail += run_local_test(name, test_case, ext, False)
name = 'spatial'
test_case = 'php'
ext = 'i'
fail += run_local_test(name, test_case, ext, True)
name = 'spatial'
test_case = 'swig'
ext = 'i'
fail += run_swig_test(name, test_case, ext)
name = 'spatial'
test_case = 'swig'
ext = 'h'
fail += run_swig_test(name, test_case, ext)
name = 'qual'
test_case = 'javascript'
ext = 'cpp'
fail += run_plugin_test(name, test_case, ext)
name = 'test_vers'
test_case = 'java'
ext = 'i'
fail += run_test(name, test_case, ext)
fail += run_ns_test(name, test_case, ext)
fail += run_pkgs_test(name, test_case, ext)
else:
name = 'test_vers'
test_case = 'java'
ext = 'i'
# TODO Why are two of these tests commented out here?
# They didn't raise any errors when I tried running them.
# fail += run_test(name, test_case, ext)
fail += run_ns_test(name, test_case, ext)
# fail += run_pkgs_test(name, test_case, ext)
test_functions.report('BINDINGS', fail, fails, not_tested)
return fail
def main():
# set up the enivornment
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, other) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# # #TODO PARSER TESTS
# name = 'qual'
# num = 0
# class_name = 'QualParser'
# test_case = 'Qual Parser'
# fail += run_parser_test(name, class_name, test_case)
#
# name = 'fbc_v2'
# num = 0
# class_name = 'FbcParser'
# test_case = 'Fbc Parser'
# fail += run_parser_test(name, class_name, test_case)
#
# name = 'distrib'
# num = 0
# class_name = 'DistribParser'
# test_case = 'Distrib Parser'
# fail += run_parser_test(name, class_name, test_case)
#
# name = 'groups'
# num = 0
# class_name = 'GroupsParser'
# test_case = 'Groups Parser'
# fail += run_parser_test(name, class_name, test_case)
#
# name = 'dyn'
# num = 0
# class_name = 'DynParser'
# test_case = 'DynParser'
# fail += run_parser_test(name, class_name, test_case)
#
# name = 'spatial'
# num = 0
# class_name = 'SpatalParser'
# test_case = 'SpatialParser'
# fail += run_parser_test(name, class_name, test_case)
# TODO Plugin Tests
# name = 'qual'
# num = 0
# class_name = 'QualModelPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
# #
#
#
# name = 'groups'
# num = 0
# class_name = 'GroupsModelPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'distrib'
# num = 0
# class_name = 'DistribFunctionDefinitionPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'distrib'
# num = 1
# class_name = 'DistribSBasePluginPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'dyn'
# num = 0
# class_name = 'DynSBasePluginPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'dyn'
# num = 1
# class_name = 'DynEventPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'dyn'
# num = 2
# class_name = 'DynCompartmentPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
# #
# name = 'fbc_v2'
# num = 0
# class_name = 'FbcModelPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'fbc_v2'
# num = 1
# class_name = 'FbcSpeciesPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'fbc_v2'
# num = 2
# class_name = 'FbcReactionPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
# name = 'spatial'
# num = 0
# class_name = 'SpatialModelPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'spatial'
# num = 1
# class_name = 'SpatialCompartmentPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
#
# name = 'spatial'
# num = 2
# class_name = 'SpatialSpeciesPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
#
# name = 'spatial'
# num = 3
# class_name = 'SpatialParameterPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
#
# name = 'spatial'
# num = 4
# class_name = 'SpatialReactionPlugin'
# test_case = 'basic plugin'
# fail += run_plug_test(name, class_name, test_case, num)
# # TODO qual tests
#
# #
#
# # Whole package test
#
#
# # # # #All qual compile
# # #Compiles
name = 'qual'
num = 0
class_name = 'QualitativeSpecies'
list_of = 'ListOfQualitativeSpecies'
test_case = 'an element on QualitativeSpecies'
fail += run_test(name, num, class_name, test_case)
# Compiles
name = 'qual'
num = 1
class_name = 'Transition'
list_of = 'ListOfTransition'
test_case = 'an element on Transition'
fail += run_test(name, num, class_name, test_case)
# # #
# # # #
# Compiles
name = 'qual'
num = 2
class_name = 'Input'
list_of = 'ListOfInput'
test_case = 'an element on Input'
fail += run_test(name, num, class_name, test_case)
# # #
# # #
# Compiles
name = 'qual'
num = 3
class_name = 'Output'
list_of = 'ListOfOutput'
test_case = 'an element on Output'
fail += run_test(name, num, class_name, test_case)
#
#
#
# Compiles
name = 'qual'
num = 4
class_name = 'DefaultTerm'
list_of = 'ListOfDefaultTerm'
test_case = 'an element on DefaultTerm'
fail += run_test(name, num, class_name, test_case)
# Compiles
name = 'qual'
num = 5
class_name = 'FunctionTerm'
list_of = 'ListOfFunctionTerm'
test_case = 'an element on FunctionTerm'
fail += run_test(name, num, class_name, test_case)
# Qual Enum Types
name = 'qual'
num = 0
enum_name = 'Sign'
test_case = 'an element on Sign Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'qual'
num = 1
enum_name = 'TransitionOutputEffect'
test_case = 'an element on TransitionOutputEffect Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'qual'
num = 2
enum_name = 'TransitionInputEffect'
test_case = 'an element on TransitionInputEffect Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'qual'
num = 3
enum_name = 'QualList'
test_case = 'an element on QualList Enum'
fail += run_enum_test(name, num, enum_name, test_case)
# Qual Constants
name = 'qual'
constants_name = 'QualConstants'
test_case = 'Qual Constants'
fail += run_constant_test(name, constants_name, test_case)
name = 'qual'
num = 0
class_name = 'QualModelPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'qual'
num = 0
class_name = 'QualParser'
test_case = 'Qual Parser'
fail += run_parser_test(name, class_name, test_case)
# #
#
# # # # TODO dyn tests
# # # #Compilable
#
# Dyn Constants
name = 'dyn'
constants_name = 'DynConstants'
test_case = 'DynConstants'
fail += run_constant_test(name, constants_name, test_case)
name = 'dyn'
num = 0
enum_name = 'DynList'
test_case = 'an element on DynList Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'dyn'
num = 0
class_name = 'DynElement'
list_of = 'ListOfDynElement'
test_case = 'an element on DynElement'
fail += run_test(name, num, class_name, test_case)
name = 'dyn'
num = 1
class_name = 'SpatialComponent'
list_of = 'ListOfSpatialComponent'
test_case = 'an element on SpatialComponent'
fail += run_test(name, num, class_name, test_case)
#
#
name = 'dyn'
num = 0
class_name = 'DynSBasePlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'dyn'
num = 1
class_name = 'DynEventPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'dyn'
num = 2
class_name = 'DynCompartmentPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
#
name = 'dyn'
num = 0
class_name = 'DynParser'
test_case = 'Dyn Parser'
fail += run_parser_test(name, class_name, test_case)
#
# # #
# # # # TODO distrib tests
# Distrib constants
name = 'distrib'
constants_name = 'DistribConstants'
test_case = 'DistribConstants'
fail += run_constant_test(name, constants_name, test_case)
name = 'distrib'
num = 0
enum_name = 'DistribList'
test_case = 'an element on DistribList Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'distrib'
num = 0
class_name = 'DrawFromDistribution'
list_of = 'ListOfDrawFromDistribution'
test_case = 'an element on DrawFromDistribution'
fail += run_test(name, num, class_name, test_case)
# Compilable
name = 'distrib'
num = 1
class_name = 'DistribInput'
list_of = 'ListOfDistribInput'
test_case = 'an element on DistribInput'
fail += run_test(name, num, class_name, test_case)
name = 'distrib'
num = 2
class_name = 'Uncertainty'
list_of = 'ListOfUncertainty'
test_case = 'an element on Uncertainty'
fail += run_test(name, num, class_name, test_case)
name = 'distrib'
num = 0
class_name = 'DistribFunctionDefinitionPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'distrib'
num = 1
class_name = 'DistribSBasePlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'distrib'
num = 0
class_name = 'DistribParser'
test_case = 'Distrib Parser'
fail += run_parser_test(name, class_name, test_case)
# # # # TODO groups tests
# # #
# Groups constants
name = 'groups'
constants_name = 'GroupsConstants'
test_case = 'GroupsConstants'
fail += run_constant_test(name, constants_name, test_case)
# Groups Enum Types
name = 'groups'
num = 0
enum_name = 'GroupKind'
test_case = 'an element on GroupKind Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'groups'
num = 1
enum_name = 'GroupsList'
test_case = 'an element on GroupsList Enum'
fail += run_enum_test(name, num, enum_name, test_case)
# Compilable
name = 'groups'
num = 0
class_name = 'Group'
list_of = 'ListOfGroup'
test_case = 'an element on Group'
fail += run_test(name, num, class_name, test_case)
#
# Compilable
name = 'groups'
num = 1
class_name = 'Member'
list_of = 'ListOfMembern'
test_case = 'an element on Member'
fail += run_test(name, num, class_name, test_case)
name = 'groups'
num = 0
class_name = 'GroupsModelPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'groups'
num = 0
class_name = 'GroupsParser'
test_case = 'Groups Parser'
fail += run_parser_test(name, class_name, test_case)
#
# FBC Constants
name = 'fbc_v2'
constants_name = 'FbcConstants'
test_case = 'Fbc Constants'
fail += run_constant_test(name, constants_name, test_case)
# all pass
name = 'fbc_v2'
num = 0
class_name = 'FluxBound'
list_of = 'ListOfFluxBound'
test_case = 'an element on FluxBound'
fail += run_test(name, num, class_name, test_case)
#
name = 'fbc_v2'
num = 1
class_name = 'Objective'
list_of = 'ListOfObjective'
test_case = 'an element on Objective'
fail += run_test(name, num, class_name, test_case)
name = 'fbc_v2'
num = 2
class_name = 'FluxObjective'
list_of = 'ListOfFluxObjective'
test_case = 'an element on FluxObjective'
fail += run_test(name, num, class_name, test_case)
# FBC Enum Types
name = 'fbc_v2'
num = 0
enum_name = 'FbcType'
test_case = 'an element on FbcType Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'fbc_v2'
num = 1
enum_name = 'FbcOperation'
test_case = 'an element on FbcOperation Enum'
fail += run_enum_test(name, num, enum_name, test_case)
name = 'fbc_v2'
num = 2
enum_name = 'FbcList'
test_case = 'an element on FbcList Enum'
fail += run_enum_test(name, num, enum_name, test_case)
# Qual Constants
name = 'fbc_v2'
constants_name = 'FbcConstants'
test_case = 'Fbc Constants'
fail += run_constant_test(name, constants_name, test_case)
# #
name = 'fbc_v2'
class_name = 'FbcParser'
test_case = 'FbcParser'
fail += run_parser_test(name, class_name, test_case)
# TODO spatial tests
# Spatial constants
name = 'spatial'
constants_name = 'SpatialConstants'
test_case = 'SpatialConstants'
fail += run_constant_test(name, constants_name, test_case)
name = 'spatial'
num = 0
class_name = 'GroupsModelPlugin'
test_case = 'basic plugin'
fail += run_plug_test(name, class_name, test_case, num)
name = 'spatial'
num = 0
class_name = 'DomainType'
list_of = 'ListOfDomainType'
test_case = 'an element on DomainType'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 1
class_name = 'Domain'
list_of = 'ListOfDomain'
test_case = 'an element on Domain'
fail += run_test(name, num, class_name, test_case)
#
#
name = 'spatial'
num = 2
class_name = 'InteriorPoint'
list_of = 'ListOfInteriorPoint'
test_case = 'an element on InteriorPoint'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 3
class_name = 'Boundary'
list_of = 'ListOfBoundary'
test_case = 'an element on Boundary'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 4
class_name = 'AdjacentDomains'
list_of = 'ListOfAdjacentDomains'
test_case = 'an element on AdjacentDomains'
fail += run_test(name, num, class_name, test_case)
#
#
name = 'spatial'
num = 5
class_name = 'GeometryDefinition'
list_of = 'ListOfGeometryDefinition'
test_case = 'an element on GeometryDefinition'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 6
class_name = 'CompartmentMapping'
list_of = 'ListOfCompartmentMapping'
test_case = 'an element on CompartmentMapping'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 7
class_name = 'CoordinateComponent'
list_of = 'ListOfCoordinateComponent'
test_case = 'an element on CoordinateComponent'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 8
class_name = 'SampledFieldGeometry'
list_of = 'ListOfSampledFieldGeometry'
test_case = 'an element on SampledFieldGeometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 9
class_name = 'SampledField'
list_of = 'ListOfSampledField'
test_case = 'an element on SampledField'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 10
class_name = 'SampledVolume'
list_of = 'ListOfSampledVolume'
test_case = 'an element on SampledVolume'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 11
class_name = 'AnalyticGeometry'
list_of = 'ListOfAnalyticGeometry'
test_case = 'an element on AnalyticGeometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 12
class_name = 'AnalyticVolume'
list_of = 'ListOfAnalyticVolume'
test_case = 'an element on AnalyticVolume'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 13
class_name = 'ParametricGeometry'
list_of = 'ListOfParametricGeometry'
test_case = 'an element on ParametricGeometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 14
class_name = 'ParametricObject'
list_of = 'ListOfParametricObject'
test_case = 'an element on ParametricObject'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 15
class_name = 'CSGeometry'
list_of = 'ListOfCSGeometry'
test_case = 'an element on CSGeometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 16
class_name = 'CSGObject'
list_of = 'ListOfCSGObject'
test_case = 'an element on CSGObject'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 17
class_name = 'CSGNode'
list_of = 'ListOfCSGNode'
test_case = 'an element on CSGNode'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 18
class_name = 'CSGTransformation'
list_of = 'ListOfCSGTransformation'
test_case = 'an element on CSGTransformation'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 19
class_name = 'CSGTranslation'
list_of = 'ListOfCSGTranslation'
test_case = 'an element on CSGTranslation'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 20
class_name = 'CSGRotation'
list_of = 'ListOfCSGRotation'
test_case = 'an element on CSGRotation'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 21
class_name = 'CSGScale'
list_of = 'ListOfCSGScale'
test_case = 'an element on CSGScale'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 22
class_name = 'CSGHomogeneousTransformation'
list_of = 'ListOfCSGHomogeneousTransformation'
test_case = 'an element on CSGHomogeneousTransformation'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 23
class_name = 'TransformationComponents'
list_of = 'ListOfTransformationComponents'
test_case = 'an element on Transition'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 24
class_name = 'CSGPrimitive'
list_of = 'ListOfCSGPrimitive'
test_case = 'an element on CSGPrimitive'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 25
class_name = 'CSGPseudoPrimitive'
list_of = 'ListOfCSGPseudoPrimitive'
test_case = 'an element on CSGPseudoPrimitive'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 26
class_name = 'CSGSetOperator'
list_of = 'ListOfCSGSetOperator'
test_case = 'an element on CSGSetOperator'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 27
class_name = 'SpatialSymbolReference'
list_of = 'ListOfSpatialSymbolReference'
test_case = 'an element on SpatialSymbolReference'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 28
class_name = 'DiffusionCoefficient'
list_of = 'ListOfDiffusionCoefficient'
test_case = 'an element on DiffusionCoefficient'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 29
class_name = 'AdvectionCoefficient'
list_of = 'ListOfAdvectionCoefficient'
test_case = 'an element on AdvectionCoefficient'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 30
class_name = 'BoundaryCondition'
list_of = 'ListOfBoundaryCondition'
test_case = 'an element on BoundaryCondition'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 31
class_name = 'Geometry'
list_of = 'ListOfGeometry'
test_case = 'an element on Geometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 32
class_name = 'CoordinateReference'
list_of = 'ListOfCoordinateReference'
test_case = 'an element on CoordinateReference'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 33
class_name = 'MixedGeometry'
list_of = 'ListOfMixedGeometry'
test_case = 'an element on MixedGeometry'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 34
class_name = 'OrdinalMapping'
list_of = 'ListOfOrdinalMapping'
test_case = 'an element on OrdinalMapping'
fail += run_test(name, num, class_name, test_case)
name = 'spatial'
num = 35
class_name = 'SpatialPoints'
list_of = 'ListOfSpatialPoints'
test_case = 'an element on SpatialPoints'
fail += run_test(name, num, class_name, test_case)
#
#
#
#
# # TODO original Tests
# # name = 'qual'
# # num = 5
# # class_name = 'FunctionTerm'
# # list_of = 'ListOfFunctionTerms'
# # test_case = 'an element on ListOf'
# # fail += run_test(name, num, class_name, test_case, list_of)
#
# # name = 'qual'
# # num = 3
# # class_name = 'Output'
# # list_of = 'ListOfOutputs'
# # test_case = 'simple class'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'qual'
# # num = 1
# # class_name = 'Transition'
# # list_of = 'ListOfTransitions'
# # test_case = 'class with child list of elements'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'qual'
# # class_name = 'QualExtension'
# # test_case = 'basic extension file'
# # fail += run_ext_test(name, class_name, test_case, 0)
# #
# #
# # name = 'qual'
# # class_name = 'QualExtensionTypes'
# # test_case = 'the types '
# # fail += run_ext_test(name, class_name, test_case, 1)
# #
# # name = 'qual'
# # class_name = 'qualfwd'
# # test_case = 'forward declarations '
# # fail += run_ext_test(name, class_name, test_case, 2)
# #
# #
# # name = 'qual'
# # class_name = 'QualSBMLError'
# # test_case = 'error enumeration '
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'qual'
# # class_name = 'QualConsistencyValidator'
# # test_case = 'validator'
# # fail += run_valid_test(name, class_name, test_case, False)
#
#
#
#
#
#
# # name = 'distrib'
# # num = 2
# # class_name = 'Uncertainty'
# # list_of = ''
# # test_case = 'class with other child'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 7
# # class_name = 'CoordinateComponent'
# # list_of = 'ListOfCoordinateComponents'
# # test_case = 'class with same child element diff name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 17
# # class_name = 'CSGNode'
# # list_of = 'ListOfCSGNodes'
# # test_case = 'abstract'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 35
# # class_name = 'SpatialPoints'
# # list_of = ''
# # test_case = 'array type'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 8
# # class_name = 'SampledFieldGeometry'
# # list_of = ''
# # test_case = 'non sbase base class'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 9
# # class_name = 'SampledField'
# # list_of = ''
# # test_case = 'additional code files'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 18
# # class_name = 'CSGTransformation'
# # list_of = ''
# # test_case = 'abstract non base class'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 3
# # class_name = 'Boundary'
# # list_of = ''
# # test_case = 'overwrites element name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 13
# # class_name = 'ParametricGeometry'
# # list_of = ''
# # test_case = 'child element and child lo_element'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 12
# # class_name = 'AnalyticVolume'
# # list_of = 'ListOfAnalyticVolumes'
# # test_case = 'class with math child'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 33
# # class_name = 'MixedGeometry'
# # list_of = ''
# # test_case = 'class with math child'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 26
# # class_name = 'CSGSetOperator'
# # list_of = ''
# # test_case = 'contains list of that has abstracts that are abstract'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'spatial'
# # num = 1
# # class_name = 'SpatialCompartmentPlugin'
# # test_case = 'plugin with child element'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'spatial'
# # num = 3
# # class_name = 'SpatialParameterPlugin'
# # test_case = 'plugin with additional code'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'spatial'
# # num = 4
# # class_name = 'SpatialReactionPlugin'
# # test_case = 'plugin only attributes'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'spatial'
# # num = 5
# # class_name = 'SpatialSBMLDocumentPlugin'
# # test_case = 'include line over extends'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'spatial'
# # class_name = 'SpatialConsistencyConstraints'
# # test_case = 'constraints'
# # fail += run_constraints_test(name, class_name, test_case)
# #
# # name = 'spatial'
# # class_name = 'SpatialValidator'
# # test_case = 'validator'
# # fail += run_valid_test(name, class_name, test_case, False)
# #
# # name = 'groups'
# # num = 1
# # class_name = 'Member'
# # list_of = 'ListOfMembers'
# # test_case = 'list of with attribute'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'groups'
# # num = 0
# # class_name = 'GroupsModelPlugin'
# # test_case = 'plugin with additional code'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'test_vers'
# # num = 0
# # class_name = 'ClassOne'
# # list_of = ''
# # test_case = 'multiple versions'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'test_vers'
# # num = 2
# # class_name = 'BBB'
# # list_of = ''
# # test_case = 'multiple versions same child lo'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'test_vers'
# # num = 0
# # class_name = 'VersModelPlugin'
# # test_case = 'versions of plugins - attributes'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'test_vers'
# # num = 1
# # class_name = 'VersSpeciesPlugin'
# # test_case = 'versions of plugins - elements'
# # fail += run_plug_test(name, class_name, test_case, num)
# #
# # name = 'test_vers'
# # class_name = 'VersExtension'
# # test_case = 'multi version extension file'
# # fail += run_ext_test(name, class_name, test_case, 0)
# #
# # name = 'fbc_v2'
# # num = 5
# # class_name = 'FbcAnd'
# # list_of = ''
# # test_case = 'inline_lo_element'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'test_child'
# # num = 0
# # class_name = 'MySEDClass'
# # list_of = ''
# # test_case = 'different language'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'base_class'
# # num = 0
# # class_name = 'MyBase'
# # list_of = ''
# # test_case = 'class with no given base class'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'base_class'
# # num = 1
# # class_name = 'ClassTwo'
# # list_of = 'ListOfClassTwos'
# # test_case = 'class with lower case name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'base_class'
# # num = 2
# # class_name = 'ClassThree'
# # list_of = ''
# # test_case = 'class with enum lower case name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'base_class'
# # class_name = 'TestExtension'
# # test_case = 'default typecodes extension file'
# # fail += run_ext_test(name, class_name, test_case, 0)
# #
# # name = 'unknown_type'
# # num = 0
# # class_name = 'UnknownType'
# # list_of = ''
# # test_case = 'class using an unknown attribute type'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'test_sidrefs'
# # class_name = 'RefsSBMLError'
# # test_case = 'sidref with multiple targets '
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'test_sidrefs_1'
# # class_name = 'RefsSBMLError'
# # test_case = 'sidref with multiple targets - diff spacing'
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'test_sidrefs_2'
# # class_name = 'RefsSBMLError'
# # test_case = 'sidref with multiple targets - diff spacing'
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'test_sidrefs_3'
# # class_name = 'RefsSBMLError'
# # test_case = 'sidref with multiple targets - diff spacing'
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'test_sidrefs_4'
# # class_name = 'RefsSBMLError'
# # test_case = 'sidref with multiple targets - diff spacing'
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'test_lists'
# # class_name = 'FooSBMLError'
# # test_case = 'error enumeration '
# # fail += run_valid_test(name, class_name, test_case)
# #
# # name = 'nasty_lists'
# # num = 0
# # class_name = 'Child'
# # list_of = ''
# # test_case = 'non uniform listOf name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'nasty_lists'
# # num = 2
# # class_name = 'Parent'
# # list_of = ''
# # test_case = 'non uniform listOf name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'nasty_lists_alt1'
# # num = 2
# # class_name = 'Parent'
# # list_of = ''
# # test_case = 'non uniform listOf name'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'lo_children'
# # num = 1
# # class_name = 'ContainerX'
# # list_of = ''
# # test_case = 'variants of lo child elements and differing api/xml names'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #sbml
# # name = 'xml_names'
# # num = 0
# # class_name = 'Fred'
# # list_of = ''
# # test_case = 'attribute xml names differ'
# # fail += run_test(name, num, class_name, test_case, list_of)
# #
# # name = 'xml_names'
# # num = 1
# # class_name = 'Other'
# # list_of = ''
# # test_case = 'element xml names differ'
# # fail += run_test(name, num, class_name, test_case, list_of)
# # run the individual tests
# name = 'test_att'
# num = 1
# class_name = 'Unit'
# list_of = ''
# test_case = 'unit sid ref'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# name = 'test_att'
# num = 2
# class_name = 'MyLoTest'
# list_of = 'ListOfMyLoTests'
# test_case = 'attribute on ListOf'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# name = 'test_att'
# num = 0
# class_name = 'MyTestClass'
# list_of = ''
# test_case = 'all types of attributes'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# name = 'test_att'
# num = 3
# class_name = 'MyRequiredClass'
# list_of = ''
# test_case = 'all types attributes required'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# name = 'test_att'
# num = 4
# class_name = 'ArrayChild'
# list_of = ''
# test_case = 'child elements and arrays'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# name = 'test_att'
# num = 5
# class_name = 'Container'
# list_of = ''
# test_case = 'a listOf child that uses listOfFoo as the name'
# fail += run_test(name, num, class_name, test_case, list_of)
#
# # #TESTING PhaSE
# name = 'qual'
# class_name = 'QualExtension'
# test_case = 'default typecodes extension file'
# fail += run_ext_test(name, class_name, test_case, 0)
test_functions.report('JAVA', fail, fails, not_tested)
return fail
def main():
runall = True
# Set up the environment.
this_dir = os.path.dirname(os.path.abspath(__file__))
(path_to_tests, _) = os.path.split(this_dir)
test_functions.set_path_to_tests(path_to_tests)
if not os.path.isdir('temp'):
os.mkdir('temp')
fail = 0
# These tests are all independent from each other,
# so their order doesn't matter.
name = 'spatial'
test_case = 'body'
fail += run_test(name, test_case)
if runall:
# Run the other individual tests.
name = 'qual'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
name = 'groups'
test_case = 'macros'
fail += run_test(name, test_case)
name = 'groups'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
name = 'groups'
test_case = 'body'
fail += run_test(name, test_case)
name = 'unknown_type'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
name = 'test_sidrefs'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
name = 'test_sidrefs'
test_case = 'body'
fail += run_test(name, test_case)
name = 'test_lists'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
name = 'test_lists'
test_case = 'body'
fail += run_test(name, test_case)
name = 'test_att'
test_case = 'apdx-validation'
fail += run_test(name, test_case)
# write summary
test_functions.report('TEX', fail, fails, not_tested)
return fail