def test(self):
# Testing pandas has special requirements.
# See: https://github.com/pandas-dev/pandas/issues/37939
# Obtain all the paths of the relevant test modules. This uses the
# subprocess module to execute `conda run`, which then runs a single
# Python command in the correct environment to import the test module
# and print it's __file__ attribute.
paths = []
for module_subpath in (
"util",
"groupby.aggregate",
"groupby.transform",
"window",
):
path = execute('conda run -n pandas python -c '
'"from pandas.tests.{} import test_numba ; '
'print(test_numba.__file__)"'.format(
module_subpath), capture=True)
paths.append(path.decode("utf-8").strip())
# Run pytest on all the testing modules. This again uses subprocess to
# execute conda run to run pytest in the correct environment on the
# correct paths of the test module.
execute('conda run --no-capture-output -n pandas pytest '
'{}'.format(" ".join(paths)))
def test_execute_false(self):
with self.assertRaises(subprocess.CalledProcessError) as e:
texasbbq.execute("false")
self.assertIn(
"Command '['false']' returned non-zero exit status 1.",
str(e)
)
def install(self):
if not os.path.exists(self.name):
git_clone_ref(self.clone_url, self.git_ref, self.name)
os.chdir(self.name)
execute("conda run -n {} {}".format(self.name,
"python setup.py install"))
os.chdir("awkward-numba")
execute("conda run -n {} {}".format(self.name,
"python setup.py install"))
os.chdir('../../')
def test_execute_capture(self):
result = texasbbq.execute("echo -n 'test'", capture=True)
self.assertEqual(b"test", result)
def test_execute_true(self):
# shoud be a no-op
texasbbq.execute("true")
def install(self):
""" Custom install function for TARDIS """
if not os.path.exists(self.name):
self.clone()
os.chdir(self.name)
execute("conda run --no-capture-output -n {} {}".format(self.name, "pip install dokuwiki pytest-azurepipelines"))
execute("conda run --no-capture-output -n {} {}".format(self.name, self.install_command))
execute("mkdir -p tardis-refdata/atom_data")
#Download the necessary refdata
execute("wget 'https://dev.azure.com/tardis-sn/TARDIS/_apis/git/repositories/tardis-refdata/items?path=atom_data/kurucz_cd23_chianti_H_He.h5&resolveLfs=true' -O tardis-refdata/atom_data/kurucz_cd23_chianti_H_He.h5")
execute("wget 'https://dev.azure.com/tardis-sn/TARDIS/_apis/git/repositories/tardis-refdata/items?path=atom_data/chianti_He.h5&resolveLfs=true' -O tardis-refdata/atom_data/chianti_He.h5")
execute("wget 'https://dev.azure.com/tardis-sn/TARDIS/_apis/git/repositories/tardis-refdata/items?path=unit_test_data.h5&resolveLfs=true' -O tardis-refdata/unit_test_data.h5")
execute("wget 'https://dev.azure.com/tardis-sn/TARDIS/_apis/git/repositories/tardis-refdata/items?path=packet_unittest.h5&resolveLfs=true' -O tardis-refdata/packet_unittest.h5")
execute("wget 'https://dev.azure.com/tardis-sn/TARDIS/_apis/git/repositories/tardis-refdata/items?path=montecarlo_1e5_compare_data.h5&resolveLfs=true' -O tardis-refdata/montecarlo_1e5_compare_data.h5")
os.chdir('../')
def clone(self):
# Awkward has special needs when cloning, --recursive.
execute(f"git clone -b {self.git_ref} {self.clone_url} "
f"--recursive {self.name}")