def _get_4pi_dipole(self, detector, proper, quats, ind, dipole):
# Rotate velocity into the detector frame. This must be the same
# frame (Pxx or Dxx) the 4pi coefficients were computed in.
# Pure qa.inv(quats) rotates into the Dxx frame
# Adding psi_uv rotates into Pxx
if self.full4pi == 'npipe':
# NPIPE factors are computed in Dxx
psi_uv = np.radians(self.rimo[detector].psi_uv)
psi_pol = np.radians(self.rimo[detector].psi_pol)
polrot = qa.rotation(ZAXIS, -(psi_uv + psi_pol))
vel = qa.rotate(qa.inv(qa.mult(np.atleast_2d(quats)[ind], polrot)),
proper * CINV)
else:
# LFI factors are in Pxx
psi_pol = np.radians(self.rimo[detector].psi_pol)
polrot = qa.rotation(ZAXIS, -psi_pol)
vel = qa.rotate(qa.inv(qa.mult(np.atleast_2d(quats)[ind], polrot)),
proper * CINV)
dipole_amplitude = self.get_fourpi_prod(vel, detector, 0)
# relativistic corrections for the quadrupole
vel2 = vel.T.copy()
for i in range(3):
dipole_amplitude += self.q * vel2[i] \
* self.get_fourpi_prod(vel, detector, i + 1)
dipole_amplitude *= self.tcmb
if self.full4pi == 'npipe':
# Apply beam efficiency correction so the template
# reflects unit response to a dipole signal
dipole_amplitude /= self._last_params[4]
dipole[ind] = dipole_amplitude
return
def _get_pntg(self,
detector,
local_start,
n,
deaberrate=True,
margin=0,
velocity=None,
full_output=False,
satquats=None):
if detector[-1] in '01' and detector[-2] != '-':
# Single diode, use common radiometer pointing
det = to_radiometer(detector)
else:
det = detector
detquat = self.RIMO[det].quat
if satquats is None:
# Get the satellite attitude
satquats, _ = read_eff(
local_start - margin, n + 2 * margin, self.globalfirst,
self.local_samples[0], self.ringdb, self.ringdb_path,
self.freq, self.effdir_pntg, 'attitude', self.satquatmask,
self.eff_cache, self.cache, self.filenames[self.effdir_pntg])
satquats = satquats.T.copy()
# Rotate into detector frame and convert to desired format
quats = qa.mult(qa.norm(satquats), detquat)
if deaberrate:
# Correct for aberration
if velocity is None:
velocity = self._get_velocity(local_start, n, margin=margin)
# Manipulate the quaternions in buffers not to allocate excessive
# Python memory
buflen = 10000
for istart in range(0, len(quats), buflen):
istop = min(istart + buflen, len(quats))
ind = slice(istart, istop)
if deaberrate:
vec = qa.rotate(quats[ind], ZAXIS)
abvec = np.cross(vec, velocity[ind])
lens = np.linalg.norm(abvec, axis=1)
ang = lens * CINV
abvec /= np.tile(lens, (3, 1)).T # Normalize for direction
abquat = qa.rotation(abvec, -ang)
quats[ind] = qa.mult(abquat, quats[ind])
if self.coordquat is not None:
quats[ind] = qa.mult(self.coordquat, quats[ind])
if full_output:
return quats, satquats
else:
return quats
def rotate_focalplane(args, data, comm):
""" The LAT focalplane projected on the sky rotates as the cryostat
(co-rotator) tilts. Usually the tilt is the same as the observing
elevation to maintain constant angle between the mirror and the cryostat.
This method must be called *before* expanding the detector pointing
from boresight.
"""
log = Logger.get()
timer = Timer()
timer.start()
for obs in data.obs:
if obs["telescope"] != "LAT":
continue
tod = obs["tod"]
cache_name = "corotator_angle_deg"
if tod.cache.exists(cache_name):
corotator_angle = tod.cache.reference(cache_name)
else:
# If a vector of co-rotator angles isn't already cached,
# make one now from the observation metadata. This will
# ensure they get recorded in the so3g files.
corotator_angle = obs["corotator_angle_deg"]
offset, nsample = tod.local_samples
tod.cache.put(cache_name, np.zeros(nsample) + corotator_angle)
el = np.degrees(tod.read_boresight_el())
rot = qa.rotation(
ZAXIS, np.radians(corotator_angle + el + LAT_COROTATOR_OFFSET_DEG)
)
quats = tod.read_boresight()
quats[:] = qa.mult(quats, rot)
try:
# If there are horizontal boresight quaternions, they need
# to be rotated as well.
quats = tod.read_boresight(azel=True)
quats[:] = qa.mult(quats, rot)
except Exception as e:
pass
if comm.comm_world is None or comm.comm_world.rank == 0:
timer.report_clear("Rotate focalplane")
return
def main():
parser = argparse.ArgumentParser(
description="This program measures the median offset of subset of "
"detectors from boresight.",
usage="get_wafer_offset [options] (use --help for details)")
group = parser.add_mutually_exclusive_group(required=True)
group.add_argument(
"--tube_slots",
help="Comma-separated list of optics tube slots: c1 (UHF), i5 (UHF), "
" i6 (MF), i1 (MF), i3 (MF), i4 (MF), o6 (LF). ")
group.add_argument("--wafer_slots",
help="Comma-separated list of optics tube slots. ")
parser.add_argument("--reverse",
action="store_true",
help="Reverse offsets")
# LAT specific params
parser.add_argument(
"--corotate-lat",
required=False,
action="store_true",
help="Rotate LAT receiver to maintain focalplane orientation",
dest="corotate_lat",
)
parser.add_argument(
"--no-corotate-lat",
required=False,
action="store_false",
help="Do not Rotate LAT receiver to maintain focalplane orientation",
dest="corotate_lat",
)
parser.set_defaults(corotate_lat=True)
parser.add_argument(
"--elevation-deg",
required=False,
type=np.float,
help="Observing elevation",
)
args = parser.parse_args()
hw = hardware.get_example()
# Which telescope?
if args.wafer_slots is not None:
wafer_slots = args.wafer_slots.split(",")
wafer_map = hw.wafer_map()
tube_slots = [wafer_map["tube_slots"][ws] for ws in wafer_slots]
else:
tube_slots = args.tube_slots.split(",")
telescope = None
for tube_slot in tube_slots:
for telescope_name, telescope_data in hw.data["telescopes"].items():
if tube_slot in telescope_data["tube_slots"]:
if telescope is None:
telescope = telescope_name
elif telescope != telescope.name:
raise RuntimeError(
f"Tubes '{tube_slots}' span more than one telescope")
if telescope is None:
raise RuntimeError(
f"Failed to match tube_slot = '{tube_slot}' with a telescope")
# Which detectors?
hw.data["detectors"] = hardware.sim_telescope_detectors(hw, telescope)
match = {}
tube_slots = None
if args.wafer_slots is not None:
match["wafer_slot"] = args.wafer_slots.split(",")
elif args.tube_slots is not None:
tube_slots = args.tube_slots.split(",")
hw = hw.select(tube_slots=tube_slots, match=match)
ndet = len(hw.data["detectors"])
# print(f"tube_slots = {tube_slots}, match = {match} leaves {ndet} detectors")
# Optional corotator rotation
if telescope == "LAT":
if args.corotate_lat:
rot = qa.rotation(ZAXIS, np.radians(LAT_COROTATOR_OFFSET_DEG))
else:
if args.elevation_deg is None:
raise RuntimeError(
"You must set the observing elevation when not co-rotating."
)
rot = qa.rotation(
ZAXIS,
np.radians(args.elevation_deg - 60 + LAT_COROTATOR_OFFSET_DEG))
else:
if args.elevation_deg is not None:
raise RuntimeError("Observing elevation does not matter for SAT")
rot = None
# Average detector offset
vec_mean = np.zeros(3)
for det_name, det_data in hw.data["detectors"].items():
quat = det_data["quat"]
if rot is not None:
quat = qa.mult(rot, quat)
vec = qa.rotate(quat, ZAXIS)
vec_mean += vec
vec_mean /= ndet
# Radius
all_dist = []
for det_name, det_data in hw.data["detectors"].items():
quat = det_data["quat"]
if rot is not None:
quat = qa.mult(rot, quat)
vec = qa.rotate(quat, ZAXIS)
all_dist.append(np.degrees(np.arccos(np.dot(vec_mean, vec))))
dist_max = np.amax(all_dist)
# Wafers
if args.tube_slots is None:
wafer_slots = set(wafer_slots)
else:
wafer_slots = set()
for tube_slot in tube_slots:
wafer_slots.update(hw.data["tube_slots"][tube_slot]["wafer_slots"])
waferstring = ""
for wafer_slot in sorted(wafer_slots):
waferstring += f" {wafer_slot}"
# Translate into Az/El offsets at el=0
rot = hp.Rotator(rot=[0, 90, 0])
vec_mean = rot(vec_mean)
az_offset, el_offset = hp.vec2dir(vec_mean, lonlat=True)
el_offset *= -1
if args.reverse:
az_offset *= -1
el_offset *= -1
print(f"{az_offset:.3f} {el_offset:.3f} {dist_max:.3f}" + waferstring)
return
def load_fp(args, comm):
start = MPI.Wtime()
autotimer = timing.auto_timer()
fp = None
# Load focalplane information
nullquat = np.array([0, 0, 0, 1], dtype=np.float64)
if comm.comm_world.rank == 0:
if args.fp is None:
# in this case, create a fake detector at the boresight
# with a pure white noise spectrum.
fake = {}
fake['quat'] = nullquat
fake['fwhm'] = 30.0
fake['fknee'] = 0.0
fake['fmin'] = 1e-9
fake['alpha'] = 1.0
fake['NET'] = 1.0
fake['color'] = 'r'
fp = {}
# Second detector at 22.5 degree polarization angle
fp['bore1'] = fake
fake2 = {}
zrot = qa.rotation(ZAXIS, 22.5 * degree)
fake2['quat'] = qa.mult(fake['quat'], zrot)
fake2['fwhm'] = 30.0
fake2['fknee'] = 0.0
fake2['fmin'] = 1e-9
fake2['alpha'] = 1.0
fake2['NET'] = 1.0
fake2['color'] = 'r'
fp['bore2'] = fake2
# Third detector at 45 degree polarization angle
fake3 = {}
zrot = qa.rotation(ZAXIS, 45 * degree)
fake3['quat'] = qa.mult(fake['quat'], zrot)
fake3['fwhm'] = 30.0
fake3['fknee'] = 0.0
fake3['fmin'] = 1e-9
fake3['alpha'] = 1.0
fake3['NET'] = 1.0
fake3['color'] = 'r'
fp['bore3'] = fake3
# Fourth detector at 67.5 degree polarization angle
fake4 = {}
zrot = qa.rotation(ZAXIS, 67.5 * degree)
fake4['quat'] = qa.mult(fake['quat'], zrot)
fake4['fwhm'] = 30.0
fake4['fknee'] = 0.0
fake4['fmin'] = 1e-9
fake4['alpha'] = 1.0
fake4['NET'] = 1.0
fake4['color'] = 'r'
fp['bore4'] = fake4
else:
with open(args.fp, 'rb') as p:
fp = pickle.load(p)
fp = comm.comm_world.bcast(fp, root=0)
stop = MPI.Wtime()
elapsed = stop - start
if comm.comm_world.rank == 0:
print('Create focalplane: {:.2f} seconds'.format(stop - start),
flush=args.flush)
start = stop
if args.debug:
if comm.comm_world.rank == 0:
outfile = '{}/focalplane.png'.format(args.outdir)
tt.plot_focalplane(fp, 6, 6, outfile)
detectors = sorted(fp.keys())
detweights = {}
for d in detectors:
net = fp[d]['NET']
detweights[d] = 1.0 / (args.samplerate * net * net)
return fp, detweights
def load_fp(args, comm):
start = MPI.Wtime()
autotimer = timing.auto_timer()
fp = None
# Load focalplane information
nullquat = np.array([0,0,0,1], dtype=np.float64)
if comm.comm_world.rank == 0:
if args.fp is None:
# in this case, create a fake detector at the boresight
# with a pure white noise spectrum.
fake = {}
fake['quat'] = nullquat
fake['fwhm'] = 30.0
fake['fknee'] = 0.0
fake['fmin'] = 1e-9
fake['alpha'] = 1.0
fake['NET'] = 1.0
fake['color'] = 'r'
fp = {}
# Second detector at 22.5 degree polarization angle
fp['bore1'] = fake
fake2 = {}
zrot = qa.rotation(ZAXIS, 22.5*degree)
fake2['quat'] = qa.mult(fake['quat'], zrot)
fake2['fwhm'] = 30.0
fake2['fknee'] = 0.0
fake2['fmin'] = 1e-9
fake2['alpha'] = 1.0
fake2['NET'] = 1.0
fake2['color'] = 'r'
fp['bore2'] = fake2
# Third detector at 45 degree polarization angle
fake3 = {}
zrot = qa.rotation(ZAXIS, 45*degree)
fake3['quat'] = qa.mult(fake['quat'], zrot)
fake3['fwhm'] = 30.0
fake3['fknee'] = 0.0
fake3['fmin'] = 1e-9
fake3['alpha'] = 1.0
fake3['NET'] = 1.0
fake3['color'] = 'r'
fp['bore3'] = fake3
# Fourth detector at 67.5 degree polarization angle
fake4 = {}
zrot = qa.rotation(ZAXIS, 67.5*degree)
fake4['quat'] = qa.mult(fake['quat'], zrot)
fake4['fwhm'] = 30.0
fake4['fknee'] = 0.0
fake4['fmin'] = 1e-9
fake4['alpha'] = 1.0
fake4['NET'] = 1.0
fake4['color'] = 'r'
fp['bore4'] = fake4
else:
with open(args.fp, 'rb') as p:
fp = pickle.load(p)
fp = comm.comm_world.bcast(fp, root=0)
stop = MPI.Wtime()
elapsed = stop - start
if comm.comm_world.rank == 0:
print('Create focalplane: {:.2f} seconds'.format(stop-start),
flush=args.flush)
start = stop
if args.debug:
if comm.comm_world.rank == 0:
outfile = '{}/focalplane.png'.format(args.outdir)
tt.plot_focalplane(fp, 6, 6, outfile)
detectors = sorted(fp.keys())
detweights = {}
for d in detectors:
net = fp[d]['NET']
detweights[d] = 1.0 / (args.samplerate * net * net)
return fp, detweights
def load_focalplane(args, comm, schedule):
focalplane = None
# Load focalplane information
if comm.comm_world is None or comm.comm_world.rank == 0:
if args.focalplane is None:
detector_data = {}
ZAXIS = np.array([0, 0, 1.0])
# in this case, create a fake detector at the boresight
# with a pure white noise spectrum.
fake = {}
fake["quat"] = np.array([0, 0, 0, 1.0])
fake["fwhm"] = 30.0
fake["fknee"] = 0.0
fake["fmin"] = 1e-9
fake["alpha"] = 1.0
fake["NET"] = 1.0
fake["color"] = "r"
detector_data["bore1"] = fake
# Second detector at 22.5 degree polarization angle
fake2 = {}
zrot = qa.rotation(ZAXIS, np.radians(22.5))
fake2["quat"] = qa.mult(fake["quat"], zrot)
fake2["fwhm"] = 30.0
fake2["fknee"] = 0.0
fake2["fmin"] = 1e-9
fake2["alpha"] = 1.0
fake2["NET"] = 1.0
fake2["color"] = "r"
detector_data["bore2"] = fake2
# Third detector at 45 degree polarization angle
fake3 = {}
zrot = qa.rotation(ZAXIS, np.radians(45))
fake3["quat"] = qa.mult(fake["quat"], zrot)
fake3["fwhm"] = 30.0
fake3["fknee"] = 0.0
fake3["fmin"] = 1e-9
fake3["alpha"] = 1.0
fake3["NET"] = 1.0
fake3["color"] = "r"
detector_data["bore3"] = fake3
# Fourth detector at 67.5 degree polarization angle
fake4 = {}
zrot = qa.rotation(ZAXIS, np.radians(67.5))
fake4["quat"] = qa.mult(fake["quat"], zrot)
fake4["fwhm"] = 30.0
fake4["fknee"] = 0.0
fake4["fmin"] = 1e-9
fake4["alpha"] = 1.0
fake4["NET"] = 1.0
fake4["color"] = "r"
detector_data["bore4"] = fake4
focalplane = Focalplane(detector_data=detector_data,
sample_rate=args.sample_rate)
else:
focalplane = Focalplane(fname_pickle=args.focalplane,
sample_rate=args.sample_rate)
if comm.comm_world is not None:
focalplane = comm.comm_world.bcast(focalplane, root=0)
if args.debug:
if comm.comm_world is None or comm.comm_world.rank == 0:
outfile = "{}/focalplane.png".format(args.outdir)
plot_focalplane(focalplane, 6, 6, outfile)
schedule.telescope.focalplane = focalplane
detweights = focalplane.detweights
return detweights
def translate(self, quats, timestamps, psi_pol=None):
"""
Translate the input quaternions into planet-centric coordinates
and convert the offsets to arc minutes. The quaternions ARE
EXPECTED to be in galactic coordinates although adding a
rotation would be straightforward.
The output coordinate system is Pxx, unless either
a) quats do not include the psi_pol rotation or
b) psi_pol is provided in radians. translate() will then remove
the psi_pol rotation from the quaternions
"""
if timestamps[0] > self.time[-1] or timestamps[-1] < self.time[0]:
raise Exception(
'There is no overlap in the stored and provided time stamps.')
if psi_pol is not None:
pol_quat = qa.rotation(zaxis, -psi_pol)
zquat = qa.mult(pol_quat, self.zquat)
else:
zquat = self.zquat
my_quats = qa.mult(quats, zquat) # From X-axis to detector position
# Transform the planet positions into quaternions
tol = 3600.
ind = np.logical_and(self.time >= timestamps[0] - tol,
self.time <= timestamps[-1] + tol)
nind = np.sum(ind)
planettime = self.time[ind]
planetglon = self.glon[ind]
planetglat = self.glat[ind]
planetquat = np.zeros([nind, 4])
# ZYZ rotation to put the X-axis to the planet position
phi = planetglon * degree
theta = -planetglat * degree
psi = 0
planetquat[:, 3] = np.cos(.5 * theta) * np.cos(.5 * (phi + psi))
planetquat[:, 0] = -np.sin(.5 * theta) * np.sin(.5 * (phi - psi))
planetquat[:, 1] = np.sin(.5 * theta) * np.cos(.5 * (phi - psi))
planetquat[:, 2] = np.cos(.5 * theta) * np.sin(.5 * (phi + psi))
targetquats = qa.slerp(timestamps, planettime, planetquat)
planetvec = qa.rotate(targetquats, xaxis)
# Rotate the planet into Dxx frame (detector on X-axis)
planetvec = qa.rotate(qa.inv(my_quats), planetvec)
# The detector position relative to the planet is the inverse
# of the planet coordinates in Dxx
lon, lat = hp.vec2dir(planetvec.T, lonlat=True)
az, el = -np.array([lon, lat]) * 60 # To arc minutes
return az, el
def from_angles(az, el):
elquat = qa.rotation(yaxis, np.radians(90 - el))
azquat = qa.rotation(zaxis, np.radians(az))
return qa.mult(azquat, elquat)
from scipy.constants import c, h, k
import healpy as hp
import numpy as np
import toast.qarray as qa
import toast.timing as timing
__path__ = os.path.dirname(__file__)
PARAM_PATH = os.path.join(__path__,
'lfi_fsl_data/DX12_dBdTcmb_release_S_param.csv')
PARAM_PATH_NPIPE = os.path.join(__path__, 'lfi_fsl_data/npipe_s_factors.csv')
XAXIS, YAXIS, ZAXIS = np.eye(3, dtype=np.float64)
SPINANGLE = np.radians(85)
SPINROT = qa.rotation(YAXIS, np.pi / 2 - SPINANGLE)
# Inverse light speed in km / s (the assumed unit for velocity)
CINV = 1e3 / c
class Dipoler():
"""
Dipoler objects return the orbital and solar system dipole as seen
by a specified detector.
"""
def __init__(self,
solsys_speed=370.082,
solsys_glon=264.00,
solsys_glat=48.24,
TCMB=2.72548,
coord='G',