def test_run_single_graphgym():
Args = namedtuple('Args', ['cfg_file', 'opts'])
root = osp.join(osp.dirname(osp.realpath(__file__)))
args = Args(osp.join(root, 'example_node.yml'), [])
load_cfg(cfg, args)
cfg.out_dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
cfg.run_dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
cfg.dataset.dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
dump_cfg(cfg)
set_printing()
seed_everything(cfg.seed)
auto_select_device()
set_run_dir(cfg.out_dir, args.cfg_file)
loaders = create_loader()
assert len(loaders) == 3
loggers = create_logger()
assert len(loggers) == 3
model = create_model()
assert isinstance(model, torch.nn.Module)
assert isinstance(model.encoder, FeatureEncoder)
assert isinstance(model.mp, GNNStackStage)
assert isinstance(model.post_mp, GNNNodeHead)
assert len(list(model.pre_mp.children())) == cfg.gnn.layers_pre_mp
optimizer = create_optimizer(model.parameters(), cfg.optim)
assert isinstance(optimizer, torch.optim.Adam)
scheduler = create_scheduler(optimizer, cfg.optim)
assert isinstance(scheduler, torch.optim.lr_scheduler.CosineAnnealingLR)
cfg.params = params_count(model)
assert cfg.params == 23880
train(loggers, loaders, model, optimizer, scheduler)
agg_runs(set_agg_dir(cfg.out_dir, args.cfg_file), cfg.metric_best)
shutil.rmtree(cfg.out_dir)
shutil.rmtree(cfg.dataset.dir)
def test_run_single_graphgym(skip_train_eval, use_trivial_metric):
Args = namedtuple('Args', ['cfg_file', 'opts'])
root = osp.join(osp.dirname(osp.realpath(__file__)))
args = Args(osp.join(root, 'example_node.yml'), [])
load_cfg(cfg, args)
cfg.out_dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
cfg.run_dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
cfg.dataset.dir = osp.join('/', 'tmp', str(random.randrange(sys.maxsize)))
dump_cfg(cfg)
set_printing()
seed_everything(cfg.seed)
auto_select_device()
set_run_dir(cfg.out_dir, args.cfg_file)
cfg.train.skip_train_eval = skip_train_eval
cfg.train.enable_ckpt = use_trivial_metric and skip_train_eval
if use_trivial_metric:
if 'trivial' not in register.metric_dict:
register.register_metric('trivial', trivial_metric)
global num_trivial_metric_calls
num_trivial_metric_calls = 0
cfg.metric_best = 'trivial'
cfg.custom_metrics = ['trivial']
else:
cfg.metric_best = 'auto'
cfg.custom_metrics = []
loaders = create_loader()
assert len(loaders) == 3
loggers = create_logger()
assert len(loggers) == 3
model = create_model()
assert isinstance(model, torch.nn.Module)
assert isinstance(model.encoder, FeatureEncoder)
assert isinstance(model.mp, GNNStackStage)
assert isinstance(model.post_mp, GNNNodeHead)
assert len(list(model.pre_mp.children())) == cfg.gnn.layers_pre_mp
optimizer = create_optimizer(model.parameters(), cfg.optim)
assert isinstance(optimizer, torch.optim.Adam)
scheduler = create_scheduler(optimizer, cfg.optim)
assert isinstance(scheduler, torch.optim.lr_scheduler.CosineAnnealingLR)
cfg.params = params_count(model)
assert cfg.params == 23880
train(loggers, loaders, model, optimizer, scheduler)
if use_trivial_metric:
# 6 total epochs, 4 eval epochs, 3 splits (1 training split)
assert num_trivial_metric_calls == 12 if skip_train_eval else 14
assert osp.isdir(get_ckpt_dir()) is cfg.train.enable_ckpt
agg_runs(set_agg_dir(cfg.out_dir, args.cfg_file), cfg.metric_best)
shutil.rmtree(cfg.out_dir)
shutil.rmtree(cfg.dataset.dir)
from torch_geometric.graphgym.utils.comp_budget import params_count
from torch_geometric.graphgym.utils.device import auto_select_device
if __name__ == '__main__':
# Load cmd line args
args = parse_args()
# Load config file
load_cfg(cfg, args)
set_out_dir(cfg.out_dir, args.cfg_file)
# Set Pytorch environment
torch.set_num_threads(cfg.num_threads)
dump_cfg(cfg)
# Repeat for different random seeds
for i in range(args.repeat):
set_run_dir(cfg.out_dir)
set_printing()
# Set configurations for each run
cfg.seed = cfg.seed + 1
seed_everything(cfg.seed)
auto_select_device()
# Set machine learning pipeline
datamodule = GraphGymDataModule()
model = create_model()
# Print model info
logging.info(model)
logging.info(cfg)
cfg.params = params_count(model)
logging.info('Num parameters: %s', cfg.params)
train(model, datamodule, logger=True)
# Aggregate results from different seeds