Example #1
0
def get_intersection_tree(T1, T2):
    T = Tree(tree=T1, deep=True)
    T1_bfs = [n for n in T1.expand_tree(mode=1)]
    T2_bfs = [n for n in T2.expand_tree(mode=1)]
    for nid in T1_bfs:
        X = set(get_leaf_node_ids_for_node(T, nid))
        diff = min([len(X.symmetric_difference(set( \
                    get_leaf_node_ids_for_node(T2,i)))) \
                    for i in T2_bfs])
        if diff != 0:
            par = T.parent(nid).identifier
            for c in T.children(nid):
                T.move_node(c.identifier, par)
            T.remove_subtree(nid)
    return T
Example #2
0
  def crossOver(individualA, individualB):
    tree = None

    while tree is None or tree.depth(tree.get_node(tree.root)) > TREE_MAX_DEPTH:
      treeA = Tree(tree = individualA.tree, deep=True)
      treeB = Tree(tree = individualB.tree, deep=True)
      regenerate_ids(treeA)
      regenerate_ids(treeB)
      removedNode = random.choice(treeA.all_nodes())
      addedNode = random.choice(treeB.all_nodes())

      addedSubtree = Tree(tree = treeB.subtree(addedNode.identifier), deep=True)

      if treeA.root == removedNode.identifier:
        tree = addedSubtree

      else:
        parent = treeA.parent(removedNode.identifier)
        treeA.remove_subtree(removedNode.identifier)
        treeA.paste(parent.identifier, addedSubtree)
        tree = treeA

    return Individual(tree)
Example #3
0
def swap(tree):
    internalNodes = [n for n in tree.all_nodes_itr() if n.var != None]
    if len(internalNodes) == 1: return tree
    internalNodes.remove(tree[0])
    cNode = random.choice(internalNodes)
    tagc = (cNode.identifier, cNode.var, cNode.split)
    pid = cNode.bpointer
    tree1 = Tree(tree, deep=True)
    sub = tree1.remove_subtree(pid)
    tags = recurTag(sub, pid)
    tagp = tags[0]
    tags[tags.index(tagc)] = (tagc[0], tagp[1], tagp[2])
    tags[0] = (tagp[0], tagc[1], tagc[2])
    string = f'{mi} swap {t}: {tags[0]}; '
    try:
        sub1 = genTree(tree[pid], tags)
    except IndexError:
        print(string + 'unswappable')
        return tree
    #rTransit = 1
    rLike = get_like_ratio(tree.R, sub.leaves(), sub1.leaves())
    rStruct = get_struct(sub.all_nodes_itr(), sub1.all_nodes_itr())
    r = rLike * rStruct
    print(string + f'{r.round(4)}')
    if random.uniform(0, 1) < r:
        if pid > 0:
            gpid = tree[pid].bpointer
            tree1.paste(gpid, sub1)
            tree1[gpid].fpointer = sorted(tree1[gpid].fpointer)
        else:
            tree1 = sub1
        tree1.w2 = tree.w2
        tree1.R = tree.R
        tree1.leaf = [n.identifier for n in tree1.leaves() if len(n.xvar) > 0]
        tree1.show()
        return tree1
    return tree
Example #4
0
class FTPClient(QtWidgets.QLabel):
    """
    FTP 连接类
    """
    _signal = pyqtSignal(str)

    def __del__(self):
        """
        退出时执行ftp断开
        :return: 
        """
        print("connect close")
        self.ftp.close()
        #self._signal.emit('Del')

    def __init__(self, host: str, username: str, password: str, port='21'):
        """
        初始化 FTP 输入主机 端口用户名密码 之后连接FTP服务器
        :param host: 主机
        :param username: 用户名
        :param password: 密码
        :param port: 端口
        """
        print("init")
        super(FTPClient, self).__init__()
        self.host = host
        self.port = int(port)
        self.username = username
        self.password = password

    def startConnect(self):
        """
        建立FTP连接
        :return: 
        """
        self.nowDirName = 'root'
        #建立文件树 和根节点
        self.tree = Tree()
        itemProject = QStandardItem('root')
        itemProject.setIcon(self.getIcon())
        self.tree.create_node('root', 'root', parent=None, data=itemProject)
        # 连接FTP 连接成功之后 创建root的子目录
        self.ftp_connect()
        self.createTree(self.ftp.nlst(), 'root')
        #print('pwd',self.ftp.pwd())
        # 以下注释部分完成了 在ftp上文件系统内部的跳转 和列出文件系统
        #print('cwd0428',self.ftp.cwd('0428'))
        #print('nlst',self.ftp.nlst())
        #print('pwd',self.ftp.pwd())
        #print('cwd0428', self.ftp.cwd('Laser'))
        #print('nlst', self.ftp.nlst())
        #print('pwd', self.ftp.pwd())
        #self.createTree(self.ftp.nlst(), 'root/0428')
        self.tree.show()
        self._signal.emit("OK")
        # 信号发送
        #print("EMIT OK")
        #print(self.tree.children('root'))
        #self.download_file('/readme.txt','G:/data_sun/readme.txt')
    def restartTree(self):
        print("刷新树")
        self.tree.remove_subtree('root')
        itemProject = QStandardItem('root')
        itemProject.setIcon(self.getIcon())
        self.tree.create_node('root', 'root', parent=None, data=itemProject)
        self.ftp.cwd('/')
        self.createTree(self.ftp.nlst(), 'root')

    def createTree(self, chiledList: list, parent: str) -> bool:
        """
        通过输入的 子目录列表 和父目录的名称 进行建立文件树
        :param chiledList: 下一层目录所有的文件列表
        :param parent: 父路径名字
        :return: 是否创建了子树 0创建失败 1创建成功
        """
        if self.tree.subtree(parent).depth() == 0:  #当前子树深度 为0  那么说明还没有刷新该节点
            print("叶节点,开始创建文件子树")
        else:
            print("不是叶节点")
            return 0
        #按照列表内部的数据 依此建树  树的名称均为 父路径 + / + 当前文件名称(主要为了实现唯一标识 不然不同文件夹下相同的文件名 就会出错)
        for i in chiledList:
            itemProject = QStandardItem((parent + '/' + i))
            #print((parent+'/'+i),(parent+'/'+i).split('.'))
            if len((parent + '/' + i).split('.')) == 1:  #如果是文件夹 那么获取系统的文件夹的图标
                itemProject.setIcon(self.getIcon())
            else:
                itemProject.setIcon(
                    self.getIcon('.' + (parent + '/' + i).split('.')[-1]))
            self.tree.create_node(
                parent + '/' + i.encode('utf-8').decode('utf-8'),
                parent + '/' + i.encode('utf-8').decode('utf-8'),
                parent=parent,
                data=itemProject)  # 根节点
        return 1

    def ftp_connect(self):
        """
        FTP的具体连接类
        :return: None
        """
        self.ftp = FTP()
        # ftp.set_debuglevel(2)
        #连接主机
        self.ftp.connect(self.host, self.port)
        #实现登录
        self.ftp.login(self.username, self.password)
        self.ftp.encoding = 'utf-8'
        print("log in success")

    def getIcon(self, extension='file'):
        """
        获取扩展名在操作系统下的默认图标
        :param extension: 文件扩展名 如果不写默认为是文件
        :return: 对应的图标
        """
        provider = QFileIconProvider()
        tmpFile = QTemporaryFile('./_aa' + extension)
        tmpFile.setAutoRemove(False)
        icon = provider.icon(QFileInfo('./_aa' + extension))
        if extension == 'file':
            # 首先生成一个临时文件 之后获取临时文件的图标返回
            fileInfo = QFileInfo("C:\\Users")
            fileIcon = QFileIconProvider()
            #print(fileInfo, fileIcon)
            icon = QIcon(fileIcon.icon(fileInfo))
            return icon
        return icon

    def download_file(self, remotepath: str, localpath: str):
        """
        从远程FTP服务器下载文件 到本地路径
        :param remotepath: 远端路径
        :param localpath: 本地路径
        :return: None
        """
        remotepath = remotepath.replace('//', '/')
        localpath = localpath.replace('//', '/')
        if os.path.isdir(remotepath) or len(remotepath.split('.')) == 1:  #是文件夹
            self.download_dir(remotepath, localpath)
            return
        print("是文件")
        bufsize = 1024
        fp = open(localpath, 'wb')
        self.ftp.retrbinary('RETR ' + remotepath, fp.write, bufsize)
        self.ftp.set_debuglevel(0)
        fp.close()
        print("下载远程文件:", remotepath, "\t到本地路径:", localpath, "成功")

    def download_dir(self, remotedir: str, localdir: str):
        """
        下载远程的文件夹到本地文件夹 
        例如 download_dir('/test','G:/ftpdata/test10') 或者download_dir('test','G:/ftpdata/test10')
        后面这个会新建一个test文档  之前那个新建/test会报错 因此就不会创建
        :param remotedir: 远程文件夹
        :param localdir: 本地文件夹
        :return: 
        """
        try:
            os.makedirs(localdir)  # 由于我之前的处理是 将文件夹直接加到了 本地连接的后面 所以需要先新建一个文件夹
        except OSError:
            print("本地文件已经存在,不进行新建")
            pass

        print("开始下载文件夹:从 ", remotedir, " 到 ", localdir)
        os.chdir(localdir)
        self.walk(remotedir, localdir)
        print("文件夹下载结束")

    def get_dirs_files(self):
        """
        获取当前目录的文件夹和文件 
        :return: (当前目录下的文件,当前目录下的文件夹)
        """
        dir_res = []
        self.ftp.dir('.', dir_res.append)
        files = [f.split(None, 8)[-1] for f in dir_res if f.startswith('-')]
        dirs = [f.split(None, 8)[-1] for f in dir_res if f.startswith('d')]
        return (files, dirs)

    def walk(self, remotedir, localdir):
        """
        在文件夹内部递归 单个传递每一个文件 直到文件夹内部文件全部传递完毕
        :param remotedir: 远程文件夹
        :param localdir: 本地文件夹
        :return: 
        """
        print('Walking to', remotedir, os.getcwd())
        self.ftp.cwd(remotedir)
        try:
            os.mkdir(remotedir)
        except OSError:
            print("创建文件夹失败,文件夹可能已经存在")
            pass
        os.chdir(localdir)
        print("now dir", os.getcwd())
        ftp_curr_dir = self.ftp.pwd()

        print("local dir", localdir)
        files, dirs = self.get_dirs_files()
        print("FILES: ", files)
        print("DIRS: ", dirs)
        for f in files:
            print(remotedir, ':', f)
            outf = open(f, 'wb')
            try:
                self.ftp.retrbinary('RETR %s' % f, outf.write)
            finally:
                outf.close()
        for d in dirs:
            print("Dir:", d, ftp_curr_dir)
            os.chdir(localdir)
            #self.ftp.cwd(ftp_curr_dir)
            self.walk(d, os.path.join(localdir, d))
        self.ftp.cwd('..')  #不加这句的话  只能递归一层 之后会出错

    def uploadFile(self, remotepath='./', localpath='./'):
        print("Upload", localpath, remotepath, os.path.isfile(localpath))
        if not os.path.isfile(localpath):
            return
        print('+++ upload %s to %s' % (localpath, remotepath))
        self.ftp.storbinary('STOR ' + remotepath, open(localpath, 'rb'))

    def upload_dir(self, remotedir='./', localdir='./'):
        '''
        实现文件的上传
        :param localdir: 
        :param remotedir: 
        :return: 
        '''
        if not os.path.isdir(localdir):
            return
        print("Upload dir", remotedir, localdir)
        try:
            self.ftp.cwd(remotedir)
        except:
            self.ftp.mkd(remotedir)
            self.ftp.cwd(remotedir)
            print("远程文件夹创建成功")
        for file in os.listdir(localdir):
            # src = os.path.join(localdir, file)
            src = localdir + '/' + file
            print(src)
            if os.path.isfile(src):
                print("is file")
                self.uploadFile(file, src)
            elif os.path.isdir(src):
                try:
                    self.ftp.mkd(file)
                except:
                    sys.stderr.write('the dir is exists %s' % file)
                self.upload_dir(file, src)
        self.ftp.cwd('..')

    def upload_file(self, remotepath: str, localpath: str):
        """
        上传本地文件到服务器
        :param remotepath:  远端路径
        :param localpath:  本地路径
        :return: None
        """
        while '//' in remotepath:
            remotepath = remotepath.replace('//', '/')
        while '//' in localpath:
            localpath = localpath.replace('//', '/')
        print(remotepath, localpath)
        if os.path.isdir(remotepath) or len(remotepath.split('.')) == 1:  #是文件夹
            self.upload_dir(remotepath, localpath)
            return

        bufsize = 1024
        fp = open(localpath, 'rb')
        self.ftp.storbinary('STOR ' + remotepath, fp, bufsize)
        self.ftp.set_debuglevel(0)
        fp.close()
        print("上传本地文件:", localpath, "\t到远程:", remotepath, "成功")
Example #5
0
def change(tree):
    nidInternal = nidValid(tree)
    choices = [getChoice(tree, n) for n in nidInternal]
    n_choices = map(lambda L: sum([len(i) for i in L]), choices)
    choiceDic = {
        a: b
        for (a, b, c) in zip(nidInternal, choices, n_choices) if c > 1
    }
    choices1 = list(choiceDic.keys())
    nid = random.choice(choices1)
    p = tree[nid].data.shape[1]
    x0 = tree[nid].var
    s0 = tree[nid].split
    choices = choiceDic[nid]  # choose nid to split
    if s0 in choices[x0 - 1]:
        choices[x0 - 1].remove(s0)  # remove original split option
    choices2 = [i for i in range(p - 1)
                if len(choices[i]) > 0]  # choose var to split
    x = random.choice(choices2)
    choices3 = choices[x]  # choose value to split
    x += 1
    s = random.choice(choices3)
    tree1 = Tree(tree, deep=True)
    pid = tree1[nid].bpointer
    sub = tree1.remove_subtree(nid)
    tags = recurTag(sub, nid)
    tags[0] = (nid, x, s)
    try:
        sub1 = genTree(sub[nid], tags)
    except IndexError:
        print(f'{mi} change {t}: {tags[0]}; unchangable')
        return tree
    if pid is not None:
        tree1.paste(pid, sub1)
        tree1[pid].fpointer = sorted(tree1[pid].fpointer)
    else:
        tree1 = sub1
    nidInternal1 = set(nidValid(tree1))
    choices1 = set(choices1)
    choices11 = nidInternal1.intersection(choices1)
    extra = nidInternal1 - choices1
    n_choices = map(lambda L: sum([len(i) for i in L]),
                    [getChoice(tree1, n) for n in extra])
    choices11 = list(choices11) + [
        a for (a, b) in zip(extra, n_choices) if b > 1
    ]
    choices31 = getChoice(tree1, nid, x0)[x0 - 1]
    n31 = len(choices31)
    if (sub1[nid].var == sub[nid].var) and (s0 in choices31):
        n31 -= 1
    rTransit = len(choices1) * len(choices3) / (len(choices11) * n31)
    rLike = get_like_ratio(tree.R, sub.leaves(), sub1.leaves())
    rStruct = get_struct(sub.all_nodes_itr(), sub1.all_nodes_itr())
    r = rLike * rTransit * rStruct
    print(f'{mi} change {t}: {tags[0]}; r={r.round(4)}')
    if random.uniform(0, 1) < r:
        tree1.w2 = tree.w2
        tree1.R = tree.R
        tree1.leaf = [n.identifier for n in tree1.leaves() if len(n.xvar) > 0]
        tree1.show()
        return tree1
    return tree
class BasicTree:
    def __init__(self, vehsInfo):
        self.tree = Tree()
        self.root = self.tree.create_node("Root", "root")    # root node
        self.vehsInfo = vehsInfo
        self.vehList = list(vehsInfo.keys())
        self.i = 1


    def _build(self, currentNode, vehList):
        '''
        :param vehList: A dict, keys is the set of vehicles, value is a tuple which represents (lane, position)
        :param currentNode: The current node in the tree
        :return: None
        '''
        s = [currentNode.tag.find(vid) for vid in vehList]    # the quit contidion in recursion
        if (np.array(s) >= 0).all():
            return
        for vehId in vehList:
            if vehId not in currentNode.tag:
                if currentNode.is_root:
                    prefix = currentNode.tag.replace("Root", "")
                else:
                    prefix = currentNode.tag
                self.tree.create_node(prefix + vehId + "-", prefix + vehId, parent=currentNode)
        for node in self.tree.all_nodes():
            if node.is_leaf():
                self._build(currentNode=node, vehList=vehList)


    def _prune(self):
        laneId = [value[0] for value in self.vehsInfo.values()]
        sortedList = []
        for i in list(set(laneId)):
            lane_info = {k: v[1] for k, v in self.vehsInfo.items() if v[0] == i}
            # Vehicles in front are at the front of the lane
            sortedList.append([vid[0] for vid in sorted(lane_info.items(), key=itemgetter(1), reverse=True)])
        pruneList = [sublist for sublist in sortedList if len(sublist) > 1]
        for subList in pruneList:
            for index in range(1, len(subList)):
                # first, prune th subtree which begin with illegal vehicle id
                self.tree.remove_subtree(subList[index])
                # second, delete the nodes which match the illegal pattern
                pattern = subList[index] + ".*" + subList[0]
                for node in self.tree.all_nodes():
                    if re.search(pattern, node.tag):
                        try:
                            self.tree.remove_node(node.identifier)
                        except:
                            pass

    def build(self):
        self._build(self.root, self.vehList)
        self._prune()

    def show(self):
        self.tree.show()

    def _leaves(self):
        '''
        :return: All the plan for vehicle passing currently.
        '''
        all_nodes = self.tree.all_nodes()
        return [node for node in all_nodes if node.is_leaf()]

    def legal_orders(self):
        leaves = self._leaves()
        orders = []
        for pattern in leaves:
            # upToRight.1-leftToBelow.18-belowToRight.2-belowToRight.3-
            tmp = pattern.tag.split("-")
            try:
                tmp.remove('')
            except:
                pass
            if len(tmp) == self.tree.depth():
                orders.append(tmp)
        return orders