def superuser(): return UKRDCUser( id="TEST_ID", cid="PYTEST", email="TEST@UKRDC_FASTAPI", permissions=Permissions.all(), scopes=["openid", "profile", "email", "offline_access"], )
def test_user(): return UKRDCUser( id="TEST_ID", cid="PYTEST", email="TEST@UKRDC_FASTAPI", permissions=[ *Permissions.all()[:-1], "ukrdc:unit:TEST_SENDING_FACILITY_1" ], scopes=["openid", "profile", "email", "offline_access"], )
async def test_user(client): response = await client.get(f"{configuration.base_url}/v1/system/user/") assert response.json().get("email") == "TEST@UKRDC_FASTAPI" assert set(response.json().get("permissions")) == set(Permissions.all())
import json import os from sqlalchemy.orm import Session from ukrdc_sqla.empi import MasterRecord from ukrdc_fastapi.dependencies.auth import Permissions, UKRDCUser from ukrdc_fastapi.dependencies.database import JtraceSession from ukrdc_fastapi.query.masterrecords import get_masterrecords_related_to_masterrecord USER = UKRDCUser(id="", email="", scopes=[], permissions=Permissions.all()) def find_ukrdc_dupes(jtrace: Session): rfile = "dupes.json" if os.path.isfile(rfile): with open(rfile, "r") as f: results = json.load(f) print("Loaded results:") print(results) else: results = {"cleared": [], "failed": {}} print("Fetching records") records: MasterRecord = jtrace.query(MasterRecord).filter( MasterRecord.id.notin_(results["cleared"])) for record in records: print(f"Processing record {record.id}") related_ukrdc_records = get_masterrecords_related_to_masterrecord(