Example #1
0
 def on_match_isolated(self, e):
     """
     Match the peaks in self.pks to possible combination of isolated rows of oligomers in the oligomerlist.
     Uses ud.make_isolated_match function.
     Populated the matchlistbox with the results of the matching.
     :param e: Unused event
     :return: None
     """
     oligos = self.oligomerlistbox.list.get_list()
     try:
         tolerance = float(self.ctlmatcherror.GetValue())
     except ValueError:
         tolerance = None
     oligomasslist, oligonames = ud.make_isolated_match(oligos)
     matchlist = ud.match(self.pks,
                          oligomasslist,
                          oligonames,
                          tolerance=tolerance)
     self.matchlistbox.list.populate(matchlist[0], matchlist[1],
                                     matchlist[2], matchlist[3])
Example #2
0
 def on_match_all(self, e):
     """
     Match the peaks in self.pks to all possible combination of oligomers in the oligomerlist.
     Uses ud.make_all_matches function.
     Populated the matchlistbox with the results of the matching.
     :param e: Unused event
     :return: None
     """
     oligos = self.oligomerlistbox.list.get_list()
     try:
         tolerance = float(self.ctlmatcherror.GetValue())
     except ValueError:
         tolerance = None
     oligomasslist, oligonames = ud.make_all_matches(oligos)
     if ud.isempty(oligomasslist):
         print("ERROR: Need to specify the Potential Oligomers")
         return
     matchlist = ud.match(self.pks,
                          oligomasslist,
                          oligonames,
                          tolerance=tolerance)
     self.matchlistbox.list.populate(matchlist[0], matchlist[1],
                                     matchlist[2], matchlist[3])