def main_pkl(f_name, out_fname):
"""
Converts the twitter data to pickle with each element being dictionary with keys
handle, text, and time
"""
# Read in the file
fid = open(f_name, 'r')
out_arr = fid.read().split('\n')
process_data = []
# Loop over all the data
for ele in out_arr:
twit_split = ele.split('||')
# Check if the data has the correct format (3 ||)
if len(twit_split) != 4:
logging.info('Twitter sample: {}'.format(ele))
continue
assert (len(twit_split[-1]) == 0)
# Convert timestamp and add to process_data
time_stamp = convert_timestamp(twit_split[-2])
if time_stamp:
process_data.append({
'handle': twit_split[0],
'text': twit_split[1],
'time': time_stamp
})
else:
logging.debug('Time Stamp Not Detected: {}'.format(ele))
save_pickle({'dat': process_data}, out_fname)
logging.info(
'Length of raw data: {} process data: {} pickle name:{}'.format(
len(out_arr), len(process_data), out_fname))
def get_accuracy_set(self, data_set,decoder,prefix):
data_loader = DataLoader(data_set, batch_size=self.batch_size)
main_arr = np.array([])
counter = 0
self.ac_arr, self.pred_arr = [],[]
for data in data_loader:
# Finding the predicted label and getting the loss function
img, label = data
if self.CUDA_val is True:
img = Variable(img).cuda()
else:
img = Variable(img)
main_arr = np.concatenate((main_arr, np.array([self.accuracy_func(self.main_model(img), label)])))
counter += 1
if counter%2 == 0:
logging.debug('Current Accuracy: {}'.format(np.mean(main_arr)))
logging.info('Total Samples: {} Accuracy: {}'.format(data_set.__len__(), np.mean(main_arr)))
return_dict = {'ac':self.ac_arr,'pred':self.pred_arr}
save_pickle(return_dict,prefix+'_stats.pkl')
if decoder is False:
return
# Reconstruct Image
base_fname = self.dataset_name + "_e" + str(self.epochs) + "_b" + str(self.batch_size) + ".png"
recons_img_fname = "recon_" + base_fname
truth_img_fname = "truth_" + base_fname
decoder = self.main_model.get_decoder()
output = self.main_model(img)
recon = decoder(output, label)
recon_img = recon.view(-1, self.main_model.img_channel, self.main_model.img_width, self.main_model.img_height) # _, channel, width, height
# Save Reconstruction and Ground Truth
torchvision.utils.save_image(recon_img.cpu().data, recons_img_fname)
torchvision.utils.save_image(img.cpu().data, truth_img_fname)
def disc_info(media, force=False):
"""
return kaa metadata disc information for the media
"""
discinfo = mmpython.parse(media.devicename)
if not discinfo or not discinfo.id:
# bad disc, e.g. blank disc
return {}
cachedir = os.path.join(config.OVERLAY_DIR, 'disc/metadata')
cachefile = os.path.join(cachedir, discinfo.id + '.freevo')
if os.path.isfile(cachefile):
metainfo = util.read_pickle(cachefile)
else:
metainfo = {}
if force or discinfo.mime == 'unknown/unknown' and not metainfo.has_key('disc_num_video'):
media.mount()
for type in ('video', 'audio', 'image'):
items = getattr(config, '%s_SUFFIX' % type.upper())
files = util.match_files_recursively(media.mountdir, items)
metainfo['disc_num_%s' % type] = len(files)
media.umount()
util.save_pickle(metainfo, cachefile)
info = Info(cachefile, discinfo, metainfo)
info.disc = True
return info
def build_graph(ids, vocabs, pmi, tfidf):
if util.is_exist("graph.pkl"):
print("loaded")
return util.load_pickle("graph.pkl")
G = networkx.Graph()
G.add_nodes_from(ids)
G.add_nodes_from(vocabs)
cn2 = lambda x: x * (x - 1) // 2
print("Calculating word_word edges")
for (i, w1), (j, w2) in tqdm(combinations(enumerate(vocabs), 2),
total=cn2(len(vocabs))):
if pmi[i][j] > 0:
G.add_edge(w1, w2, weight=pmi[i][j])
print("Calculating doc_word edges")
for i, review_id in tqdm(enumerate(ids), total=len(ids)):
for j, word in enumerate(vocabs):
G.add_edge(review_id, word, weight=tfidf[i][j])
print("Calculating doc_doc edges")
for review_id in tqdm(ids, total=len(ids)):
G.add_edge(review_id, review_id, weight=1)
util.save_pickle(G, "graph.pkl")
return G
def load_data(file, max_num=None):
if util.is_exist("data.pkl"):
print("loaded")
return util.load_pickle("data.pkl")
labels = []
reviews = []
ids = []
with open(file, 'r', encoding='utf-8') as f:
lines = f.readlines()
max_line = len(lines) if max_num is None else max_num + 1
# Ignore Header Line
for line in lines[1:max_line]:
id, label, review = line.split("\t")
labels.append(label)
# remove quotation marks around
review = review[1:len(review) - 1]
reviews.append(review)
# remove quotation marks around
id = id[1:len(id) - 1]
ids.append(id)
reviews = [cleanText(r) for r in reviews]
util.save_pickle((ids, labels, reviews), "data.pkl")
return ids, labels, reviews
def toggle_display_style(self, menu):
"""
Toggle display style
"""
if isinstance(menu, str):
if not self.display_style.has_key(menu):
self.display_style[menu] = 0
self.display_style[menu] = (self.display_style[menu] + 1) % len(self.settings.sets[menu].style)
return 1
if menu.force_skin_layout != -1:
return 0
if menu and menu.skin_settings:
settings = menu.skin_settings
else:
settings = self.settings
if settings.special_menu.has_key(menu.item_types):
area = settings.special_menu[menu.item_types]
else:
area = settings.default_menu['default']
if self.display_style['menu'] >= len(area.style):
self.display_style['menu'] = 0
self.display_style['menu'] = (self.display_style['menu'] + 1) % len(area.style)
self.storage[config.SKIN_XML_FILE] = self.display_style['menu']
util.save_pickle(self.storage, self.storage_file)
return 1
def set_base_fxd(self, name):
"""
set the basic skin fxd file
"""
config.SKIN_XML_FILE = os.path.splitext(os.path.basename(name))[0]
logger.debug('load basic skin settings: %s', config.SKIN_XML_FILE)
# try to find the skin xml file
if not self.settings.load(name, clear=True):
print "skin not found, using fallback skin"
self.settings.load('basic.fxd', clear=True)
for dir in config.cfgfilepath:
local_skin = '%s/local_skin.fxd' % dir
if os.path.isfile(local_skin):
logger.log( 9, 'Skin: Add local config %s to skin', local_skin)
self.settings.load(local_skin)
break
self.storage['SKIN_XML_FILE'] = config.SKIN_XML_FILE
util.save_pickle(self.storage, self.storage_file)
if self.storage.has_key(config.SKIN_XML_FILE):
self.display_style['menu'] = self.storage[config.SKIN_XML_FILE]
else:
self.display_style['menu'] = 0
def setup_DUC_sentences(task, parser=None, reload=False):
## load problems quickly from pickle file
if (not reload) and os.path.isfile(task.data_pickle):
sys.stderr.write('Loading [%s] problem data from [%s]\n' %
(task.name, task.data_pickle))
task.problems = util.load_pickle(task.data_pickle)
return
## only parse sentences if needed
for problem in task.problems:
print problem.id
problem.load_documents()
if parser:
for doc in problem.new_docs:
doc.parse_sentences(parser)
if parser:
parser.run()
for sentence, parsetree in parser.parsed.items():
sentence.parsed = parsetree
## save pickled version for faster loading later
sys.stderr.write('Saving [%s] problem data in [%s]\n' %
(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
def fetchheadlinesfromurl(self):
headlines = []
popup = PopupBox(text=_('Fetching headlines...'))
popup.show()
try:
# parse the document
doc = util.feedparser.parse(self.url)
if doc.status < 400:
for entry in doc['entries']:
try:
title = Unicode(entry.title)
link = Unicode(entry.link)
if entry.has_key('content') and len(entry['content']) >= 1:
description = Unicode(entry['content'][0].value)
else:
description = Unicode(entry['summary_detail'].value)
headlines.append((title, link, description))
except AttributeError:
pass
else:
logger.debug('Error %s, getting %r', doc.status, self.url)
#write the file
if len(headlines) > 0:
pfile = os.path.join(self.cachedir, 'headlines-%i' % self.location_index)
util.save_pickle(headlines, pfile)
finally:
popup.destroy()
return headlines
def setup_DUC_sentences(task, parser=None, reload=False, options=None):
## load problems quickly from pickle file
if (not reload) and os.path.isfile(task.data_pickle):
sys.stderr.write('Loading [%s] problem data from [%s]\n' %
(task.name, task.data_pickle))
task.problems = util.load_pickle(task.data_pickle)
return
## parse sentences
if options:
text.text_processor.load_splitta_model(options.splitta_model)
else:
text.text_processor.load_splitta_model(
'/u/dgillick/sbd/splitta/model_nb/')
for problem in task.problems:
sys.stderr.write('%s\n' % problem.id)
problem.load_documents()
if parser:
for doc in problem.new_docs:
doc.parse_sentences(parser)
problem.parsed = True
if parser:
parser.run()
for sentence, parsetree in parser.parsed.items():
sentence.parsed = parsetree
## save pickled version for faster loading later
sys.stderr.write('Saving [%s] problem data in [%s]\n' %
(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
def make_wordvec_dict(f_name, out_fname, threads):
"""
Loads the pickle containing the dictionary gets word vector from
parallel processing it and puts into dict saved in out_fname
"""
# Make list of unique words
word_list = list(load_pickle(f_name))
# Send job to workers
per_f = int(len(word_list) / threads) + 1
logging.info('Per Thread {}'.format(per_f))
pool = mp.Pool(processes=threads)
processes = [
pool.apply_async(parallel_word_dict,
args=(word_list, per_f * (x - 1), per_f * x))
for x in range(1, threads + 1)
]
# Get data and put it out
output = [process.get() for process in processes]
out_dict = {}
for ele in output:
out_dict = {**out_dict, **ele}
pool.close()
save_pickle(out_dict, out_fname)
logging.info('Made Dictionary Using Spacy')
def __init__(self, dataPath, indexfile,
spectype='stft', n_fft=1024, window='hann', win_length=1024, hop_length=512,
shape='disk', neighbourhood=10, uniform=True, show=False,
gap=50, targetsize=(200, 200)):
# Parameters for spectrogram
self.spectype = spectype
self.n_fft = n_fft
self.window = window
self.win_length = win_length
self.hop_length = hop_length
# Parameters for peak picking
self.shape = shape
self.neighbourhood = neighbourhood
self.uniform = uniform
self.show = show
# Parameters for combinatorial hashing
self.gap = gap
self.targetsize = targetsize
# Stores hashed data for matching
self.data = {}
self.identity2title = []
# Looping through all data and saving (assumes the whole directory is full of wavs to index)
for identity, filename in enumerate(tqdm(os.listdir(dataPath))):
self.identity2title.append(filename) # Keeping track of id and title with .wav at end
hash_dict = self.fingerprint(dataPath+'/'+filename, identity)
self.data.update(hash_dict)
save_pickle(self, indexfile) # saves itself as an object with data and parameter info
def prepare_location(loc):
print " Processing %s..." % loc
data_i, xs_i, ys_i = read_location_images(loc, 'three_band')
data_m, xs_m, ys_m = read_location_images(loc, 'sixteen_band', 'M')
#data_p, xs_p, ys_p = read_location_images(loc, 'sixteen_band', 'P')
# Prepare images
for i in xrange(n_location_images):
for j in xrange(n_location_images):
meta = {
'shape': (0, ys_i[i + 1] - ys_i[i], xs_i[j + 1] - xs_i[j]),
'shape_i': (data_i.shape[0], ys_i[i + 1] - ys_i[i],
xs_i[j + 1] - xs_i[j]),
'shape_m': (data_m.shape[0], ys_m[i + 1] - ys_m[i],
xs_m[j + 1] - xs_m[j]),
#'shape_p': (data_p.shape[0], ys_p[i+1] - ys_p[i], xs_p[j+1] - xs_p[j])
}
save_pickle('cache/meta/%s_%d_%d.pickle' % (loc, i, j), meta)
write_location_images(loc, data_i, xs_i, ys_i, 'I')
write_location_images(loc, data_m, xs_m, ys_m, 'M')
#write_location_images(loc, data_p, xs_p, ys_p, 'P')
write_location_images(loc, normalize(data_m), xs_m, ys_m,
'MN') # Write location-normalized M channels
write_location_images(loc, compute_filters(data_i), xs_i, ys_i, 'IF')
write_location_images(loc, compute_indices(data_m), xs_m, ys_m, 'MI')
def disc_info(media, force=False):
"""
return kaa metadata disc information for the media
"""
discinfo = mmpython.parse(media.devicename)
if not discinfo or not discinfo.id:
# bad disc, e.g. blank disc
return {}
cachedir = os.path.join(config.OVERLAY_DIR, 'disc/metadata')
cachefile = os.path.join(cachedir, discinfo.id + '.freevo')
if os.path.isfile(cachefile):
metainfo = util.read_pickle(cachefile)
else:
metainfo = {}
if force or discinfo.mime == 'unknown/unknown' and not metainfo.has_key('disc_num_video'):
media.mount()
for type in ('video', 'audio', 'image'):
items = getattr(config, '%s_SUFFIX' % type.upper())
files = util.match_files_recursively(media.mountdir, items)
metainfo['disc_num_%s' % type] = len(files)
media.umount()
util.save_pickle(metainfo, cachefile)
info = Info(cachefile, discinfo, metainfo)
info.disc = True
return info
def fetchheadlinesfromurl(self):
headlines = []
popup = PopupBox(text=_('Fetching headlines...'))
popup.show()
try:
# parse the document
doc = util.feedparser.parse(self.url)
if doc.status < 400:
for entry in doc['entries']:
try:
title = Unicode(entry.title)
link = Unicode(entry.link)
if entry.has_key('content') and len(
entry['content']) >= 1:
description = Unicode(entry['content'][0].value)
else:
description = Unicode(
entry['summary_detail'].value)
headlines.append((title, link, description))
except AttributeError:
pass
else:
logger.debug('Error %s, getting %r', doc.status, self.url)
#write the file
if len(headlines) > 0:
pfile = os.path.join(self.cachedir,
'headlines-%i' % self.location_index)
util.save_pickle(headlines, pfile)
finally:
popup.destroy()
return headlines
def preprocess():
if util.is_exist("preprocessed.pkl"):
print("loading")
return util.load_pickle("preprocessed.pkl")
_, labels, _ = util.load_pickle("data.pkl")
labels = np.array(labels, dtype=np.int32)
G = util.load_pickle("graph.pkl")
print("calc adjacent matrix")
A = networkx.to_numpy_matrix(G, weight="weight")
print("calc degree matrix")
degrees = [d**-0.5 if d != 0 else 0 for _, d in G.degree]
print("normalize adjacent matrix")
'''
degrees = np.diag(degrees)
A_hat = degrees @ A @ degrees
'''
# decrease memory allocation
A_hat = A
for i in tqdm(range(A.shape[0]), total=A.shape[0]):
for j in range(A.shape[1]):
A_hat[i, j] *= degrees[i] * degrees[j]
print("calc feature matrix")
X = np.eye(G.number_of_nodes()) # Features are just identity matrix
util.save_pickle((X, A_hat, labels), "preprocessed.pkl")
return X, A_hat, labels
def setup_DUC_sentences(task, parser=None, reload=False):
## load problems quickly from pickle file
if (not reload) and os.path.isfile(task.data_pickle):
sys.stderr.write('Loading [%s] problem data from [%s]\n' %(task.name, task.data_pickle))
task.problems = util.load_pickle(task.data_pickle)
return
## parse sentences
text.text_processor.load_splitta_model('/u/dgillick/sbd/splitta/model_nb/')
for problem in task.problems:
sys.stderr.write('%s\n' %problem.id)
problem.load_documents()
if parser:
for doc in problem.new_docs:
doc.parse_sentences(parser)
problem.parsed = True
if parser:
parser.run()
for sentence, parsetree in parser.parsed.items():
sentence.parsed = parsetree
## save pickled version for faster loading later
sys.stderr.write('Saving [%s] problem data in [%s]\n' %(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
def delete_old_files_2():
"""
delete cachfiles/entries for files which don't exists anymore
"""
print checking('deleting old web-server thumbnails'),
sys.__stdout__.flush()
num = 0
for file in util.match_files_recursively(vfs.www_image_cachedir(),
config.IMAGE_SUFFIX):
if not vfs.isfile(
file[len(vfs.www_image_cachedir()):file.rindex('.')]):
os.unlink(file)
num += 1
print 'deleted %s file%s' % (num, num != 1 and 's' or '')
print checking('deleting old cache files'),
sys.__stdout__.flush()
num = 0
for file in util.match_files_recursively(config.OVERLAY_DIR, ['raw']):
if file.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
continue
if not vfs.isfile(file[len(config.OVERLAY_DIR):-4]):
os.unlink(file)
num += 1
print 'deleted %s file%s' % (num, num != 1 and 's' or '')
print checking('deleting cache for directories not existing anymore'),
subdirs = util.get_subdirs_recursively(config.OVERLAY_DIR)
subdirs.reverse()
for file in subdirs:
if not os.path.isdir(file[len(config.OVERLAY_DIR):]) and not \
file.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
for metafile in ('cover.png', 'cover.png.raw', 'cover.jpg',
'cover.jpg.raw', 'mmpython.cache',
'freevo.cache'):
if os.path.isfile(os.path.join(file, metafile)):
os.unlink(os.path.join(file, metafile))
if not os.listdir(file):
os.rmdir(file)
print 'done'
print checking('deleting old entries in meta-info'),
sys.__stdout__.flush()
for filename in util.recursefolders(config.OVERLAY_DIR, 1, 'freevo.cache',
1):
if filename.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
continue
sinfo = os.stat(filename)
if not sinfo[ST_SIZE]:
#print '%s is empty' % filename
continue
dirname = os.path.dirname(filename)[len(config.OVERLAY_DIR):]
data = util.read_pickle(filename)
for key in copy.copy(data):
if not os.path.exists(os.path.join(dirname, str(key))):
del data[key]
util.save_pickle(data, filename)
print 'done'
def fetchheadlinesfromurl(self):
"""
this fetches the headlines (title, link and description) from the url.
Here the parsing of the xml is done
"""
headlines = []
# create Reader object
reader = Sax2.Reader()
popup = dialog.show_working_indicator(_('Fetching headlines...'))
# parse the document
try:
myfile=urllib.urlopen(self.url)
doc = reader.fromStream(myfile)
items = doc.getElementsByTagName('item')
for item in items:
title = ''
link = ''
description = ''
if item.hasChildNodes():
for c in item.childNodes:
if c.localName == 'title':
title = c.firstChild.data
if c.localName == 'description':
description = c.firstChild.data
#################################
# Ajout pour identifier le lien de la video
if self.mode == 'youtube':
if c.localName == 'link':
link='youtube:'+c.firstChild.data
else:
if c.localName == 'enclosure':
attrs = c.attributes
for attrName in attrs.keys():
attrNode = attrs.get(attrName)
attrValue = attrNode.nodeValue
if 'url' in attrName:
link = attrValue
if title:
headlines.append((title, link, description))
except:
#unreachable or url error
logger.error('could not open %s', self.url)
pass
#write the file
if len(headlines) > 0:
pfile = os.path.join(self.cachedir, 'itv-%i' % self.location_index)
util.save_pickle(headlines, pfile)
popup.hide()
return headlines
def del_cache():
"""
delete all cache files because kaa metadata got updated
"""
for f in util.recursefolders(config.OVERLAY_DIR,1,'mmpython.cache',1):
os.unlink(f)
for f in util.match_files(config.OVERLAY_DIR + '/disc/metadata', ['mmpython']):
os.unlink(f)
cachefile = os.path.join(config.FREEVO_CACHEDIR, 'mediainfo')
util.save_pickle((mmpython.version.VERSION, 0, 0, 0), cachefile)
def save_cache(self):
"""
save a modified cache file
"""
if self.cache_modified:
logger.log( 9, 'save cache %s', self.current_cachefile)
util.save_pickle(self.current_objects, self.current_cachefile)
self.cache_modified = False
if config.MEDIAINFO_USE_MEMORY:
self.all_directories[self.current_cachefile] = self.current_objects
def del_cache():
"""
delete all cache files because kaa metadata got updated
"""
for f in util.recursefolders(config.OVERLAY_DIR,1,'mmpython.cache',1):
os.unlink(f)
for f in util.match_files(config.OVERLAY_DIR + '/disc/metadata', ['mmpython']):
os.unlink(f)
cachefile = os.path.join(config.FREEVO_CACHEDIR, 'mediainfo')
util.save_pickle((mmpython.version.VERSION, 0, 0, 0), cachefile)
def save_cache(self):
"""
save a modified cache file
"""
if self.cache_modified:
logger.log( 9, 'save cache %s', self.current_cachefile)
util.save_pickle(self.current_objects, self.current_cachefile)
self.cache_modified = False
if config.MEDIAINFO_USE_MEMORY:
self.all_directories[self.current_cachefile] = self.current_objects
def saveToCache(self):
util.save_pickle(self.weatherData, self.cacheFile)
# attempt to save weathermap
try:
if self.weatherMapData is not None:
imgfd = os.open(self.mapFile, os.O_CREAT|os.W_OK)
os.write(imgfd, self.weatherMapData)
os.close(imgfd)
except:
print "failed while saving weather map to cache '%s'" % (self.mapFile,)
def saveToCache(self):
util.save_pickle(self.weatherData, self.cacheFile)
# attempt to save weathermap
try:
if self.weatherMapData is not None:
imgfd = os.open(self.mapFile, os.O_CREAT|os.W_OK)
os.write(imgfd, self.weatherMapData)
os.close(imgfd)
except:
print "failed while saving weather map to cache '%s'" % (self.mapFile,)
def delete_old_files_2():
"""
delete cachfiles/entries for files which don't exists anymore
"""
print checking('deleting old web-server thumbnails'),
sys.__stdout__.flush()
num = 0
for file in util.match_files_recursively(vfs.www_image_cachedir(), config.IMAGE_SUFFIX):
if not vfs.isfile(file[len(vfs.www_image_cachedir()):file.rindex('.')]):
os.unlink(file)
num += 1
print 'deleted %s file%s' % (num, num != 1 and 's' or '')
print checking('deleting old cache files'),
sys.__stdout__.flush()
num = 0
for file in util.match_files_recursively(config.OVERLAY_DIR, ['raw']):
if file.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
continue
if not vfs.isfile(file[len(config.OVERLAY_DIR):-4]):
os.unlink(file)
num += 1
print 'deleted %s file%s' % (num, num != 1 and 's' or '')
print checking('deleting cache for directories not existing anymore'),
subdirs = util.get_subdirs_recursively(config.OVERLAY_DIR)
subdirs.reverse()
for file in subdirs:
if not os.path.isdir(file[len(config.OVERLAY_DIR):]) and not \
file.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
for metafile in ('cover.png', 'cover.png.raw', 'cover.jpg', 'cover.jpg.raw', 'mmpython.cache',
'freevo.cache'):
if os.path.isfile(os.path.join(file, metafile)):
os.unlink(os.path.join(file, metafile))
if not os.listdir(file):
os.rmdir(file)
print 'done'
print checking('deleting old entries in meta-info'),
sys.__stdout__.flush()
for filename in util.recursefolders(config.OVERLAY_DIR, 1, 'freevo.cache', 1):
if filename.startswith(os.path.join(config.OVERLAY_DIR, 'disc')):
continue
sinfo = os.stat(filename)
if not sinfo[ST_SIZE]:
#print '%s is empty' % filename
continue
dirname = os.path.dirname(filename)[len(config.OVERLAY_DIR):]
data = util.read_pickle(filename)
for key in copy.copy(data):
if not os.path.exists(os.path.join(dirname, str(key))):
del data[key]
util.save_pickle(data, filename)
print 'done'
def get_docs(task, num_docs, reload=False):
"""
returns a new task, where each problem in task.problems has:
problem.ir_docs = [ ... ]
"""
## check state
if not reload and framework.check_state(task.problems)['ir']:
sys.stderr.write('already have ir documents loaded\n')
return task
max_files = 0
## get all query tokens; use tfidf.get_tokens because this matches the index's tokenization
queries_by_problem_id = {}
for problem in task.problems:
#curr_query = ' '.join(tfidf.get_tokens(problem.query.original))
curr_query = ' '.join(make_query(problem))
queries_by_problem_id[problem.id] = curr_query
## do the search
all_queries = queries_by_problem_id.values()
docs_by_query = tfidf.search(tfidf.file_index_pickle_path, all_queries,
tfidf.search_cmd, max_files, num_docs)
## for debugging
docfh = open('irdoc_debug', 'w')
## allocate docs to problems
for problem in task.problems:
query = queries_by_problem_id[problem.id]
docs_with_values = docs_by_query[query]
## inspect values for debugging
docfh.write('# problem [%s]\n' % problem.id)
for doc, val in docs_with_values:
docfh.write('## doc_id [%s] value [%1.4f]\n' %
(doc.id, float(val)))
for par in doc.paragraphs:
docfh.write('%s\n' % par)
## sentence segmentation
docs = [doc for doc, val in docs_with_values]
for doc in docs:
doc.get_sentences()
problem.ir_docs = docs
problem.loaded_ir_docs = True
## pickle it up
sys.stderr.write('Saving [%s] problem data in [%s]\n' %
(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
return task
def save(self):
dict = {'datasets': self.datasets,'version': 0.1}
#for now: make a backup first:
database_filename = self.path+'/'+self.filename
backup_filename = self.path+'/'+self.filename+'_backup_'+ut.formatted_time()
print 'Backing up old database to ' + backup_filename
shutil.copy(database_filename, backup_filename)
print "Saving: "+database_filename
ut.save_pickle(dict,database_filename)
def save(self, save_dir):
model_params = (self.ob_size, self.actions, self.device, self.gamma,
self.memory_size, self.layer_sizes, self.adv_sizes,
self.val_sizes, self.double, self.dueling)
util.save_pickle(os.path.join(save_dir, 'params.pickle'), model_params)
torch.save(self.policy_net.state_dict(),
os.path.join(save_dir, 'policy_net.pt'))
util.save_pickle(os.path.join(save_dir, 'memory.pickle'), self.memory)
logger.info(f'Model saved to {save_dir}')
def read_and_process(args, tokenizer, dataset_dict, dir_name, dataset_name, split):
#TODO: cache this if possible
cache_path = f'{dir_name}/{dataset_name}_encodings.pt'
if os.path.exists(cache_path) and not args.recompute_features:
tokenized_examples = util.load_pickle(cache_path)
else:
if split=='train':
tokenized_examples = prepare_train_data(dataset_dict, tokenizer)
else:
tokenized_examples = prepare_eval_data(dataset_dict, tokenizer)
util.save_pickle(tokenized_examples, cache_path)
return tokenized_examples
def calc_tf_idf(reviews, min_df=0.01):
if util.is_exist("tf-idf.pkl"):
print("loaded")
return util.load_pickle("tf-idf.pkl")
vectorizer = TfidfVectorizer(input="content",
stop_words=stopwords.words("english"),
min_df=min_df,
max_df=0.5)
vectorizer.fit(reviews)
tfidf = vectorizer.transform(reviews).toarray()
vocab = vectorizer.get_feature_names()
util.save_pickle((tfidf, vocab), "tf-idf.pkl")
return tfidf, vocab
def make_dict_pickle(f_name, out_fname):
"""
Cleans the tweets and makes a set of all the words
"""
logging.info('Making pickle for the dictionary')
word_set = set()
for tweet in load_pickle(f_name)['dat']:
words, _ = clean_tweet(tweet['text'])
for word in words:
word_set.add(word)
logging.info('Number unique words: {}'.format(len(word_set)))
save_pickle(word_set, out_fname)
logging.info('Saved dictionary to: {}'.format(out_fname))
def get_dat():
try:
config = configparser.ConfigParser()
config.read("tweepy_config")
auth = tweepy.OAuthHandler(config['s1']['key'], config['s1']['secret'])
auth.set_access_token(config['s1']['token'],
config['s1']['token_secret'])
api = tweepy.API(auth)
tweets = [(tweet.author.screen_name, tweet.text)
for tweet in api.search(q='bitcoin', count=300, lang='en')]
save_pickle({'dat': tweets}, "new.pkl")
return tweets
except KeyError:
print('Extraction of tweets did not work')
def get_docs(task, num_docs, reload=False):
"""
returns a new task, where each problem in task.problems has:
problem.ir_docs = [ ... ]
"""
## check state
if not reload and framework.check_state(task.problems)['ir']:
sys.stderr.write('already have ir documents loaded\n')
return task
max_files = 0
## get all query tokens; use tfidf.get_tokens because this matches the index's tokenization
queries_by_problem_id = {}
for problem in task.problems:
#curr_query = ' '.join(tfidf.get_tokens(problem.query.original))
curr_query = ' '.join(make_query(problem))
queries_by_problem_id[problem.id] = curr_query
## do the search
all_queries = queries_by_problem_id.values()
docs_by_query = tfidf.search(tfidf.file_index_pickle_path, all_queries, tfidf.search_cmd, max_files, num_docs)
## for debugging
docfh = open('irdoc_debug', 'w')
## allocate docs to problems
for problem in task.problems:
query = queries_by_problem_id[problem.id]
docs_with_values = docs_by_query[query]
## inspect values for debugging
docfh.write('# problem [%s]\n' %problem.id)
for doc, val in docs_with_values:
docfh.write('## doc_id [%s] value [%1.4f]\n' %(doc.id, float(val)))
for par in doc.paragraphs:
docfh.write('%s\n' %par)
## sentence segmentation
docs = [doc for doc, val in docs_with_values]
for doc in docs: doc.get_sentences()
problem.ir_docs = docs
problem.loaded_ir_docs = True
## pickle it up
sys.stderr.write('Saving [%s] problem data in [%s]\n' %(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
return task
def save_cache(self, settings, filename):
"""
cache the fxd skin settings in 'settings' to the OVERLAY_DIR cachfile
for filename and this resolution
"""
cache = self.cachename(filename)
if cache:
# delete font object, because it can't be pickled
for f in settings.font:
del settings.font[f].font
# save object and version information
util.save_pickle((xml_skin.FXD_FORMAT_VERSION, settings), cache)
# restore font object
for f in settings.font:
settings.font[f].font = osd.getfont(settings.font[f].name, settings.font[f].size)
def store(self, key, value):
"""
store the key/value in metadata and save the cache
"""
self.metadata[key] = value
if self.disc:
self.metadata[key] = value
util.save_pickle(self.metadata, self.filename)
return True
elif not self.filename:
return False
else:
meta_cache.set(os.path.basename(self.filename), os.path.dirname(self.filename),
self.filename, self.metadata)
return True
def store(self, key, value):
"""
store the key/value in metadata and save the cache
"""
self.metadata[key] = value
if self.disc:
self.metadata[key] = value
util.save_pickle(self.metadata, self.filename)
return True
elif not self.filename:
return False
else:
meta_cache.set(os.path.basename(self.filename), os.path.dirname(self.filename),
self.filename, self.metadata)
return True
def delete(self, key):
"""
delete the key in metadata and save the cache
"""
if self.disc:
if self.metadata.has_key(key):
del self.metadata[key]
util.save_pickle(self.metadata, self.filename)
return True
elif not self.filename:
return False
if self.metadata.has_key(key):
del self.metadata[key]
meta_cache.set(os.path.basename(self.filename), os.path.dirname(self.filename),
self.filename, self.metadata)
return True
def delete(self, key):
"""
delete the key in metadata and save the cache
"""
if self.disc:
if self.metadata.has_key(key):
del self.metadata[key]
util.save_pickle(self.metadata, self.filename)
return True
elif not self.filename:
return False
if self.metadata.has_key(key):
del self.metadata[key]
meta_cache.set(os.path.basename(self.filename), os.path.dirname(self.filename),
self.filename, self.metadata)
return True
def train_punkt_model(self, text, save_path=None):
"""
unsupervised training given some text
optional save_path for future use
"""
## train tokenizer
sys.stderr.write('Training...\n')
t = nltk.tokenize.punkt.PunktSentenceTokenizer()
t.ABBREV = 0.1 # threshold for identifying abbrevs (lower is more aggressive)
t.train(rawtext)
self._sent_tokenizer = t
## pickle it
if save_path:
util.save_pickle(t, save_path)
sys.stderr.write('Saved model as [%s]\n' %output)
def train_punkt_model(self, text, save_path=None):
"""
unsupervised training given some text
optional save_path for future use
"""
## train tokenizer
sys.stderr.write('Training...\n')
t = nltk.tokenize.punkt.PunktSentenceTokenizer()
t.ABBREV = 0.1 # threshold for identifying abbrevs (lower is more aggressive)
t.train(rawtext)
self._sent_tokenizer = t
## pickle it
if save_path:
util.save_pickle(t, save_path)
sys.stderr.write('Saved model as [%s]\n' % output)
def build_model(files, options):
## create a Doc object from some labeled data
train_corpus = get_data(files, tokenize=options.tokenize)
## create a new model
if options.svm: model = SVM_Model(train_corpus, options.model_path)
else: model = NB_Model(train_corpus, options.model_path)
## featurize the training corpus
train_corpus.featurize(model)
## run the model's training routine
model.train(train_corpus)
## save the model
util.save_pickle(model, options.model_path + 'model.pkl')
return model
def save(self, filename=None):
"""
Save the tree
"""
if not filename:
filename = self.filename
if vfs.isfile(filename):
vfs.unlink(filename)
f = vfs.codecs_open(filename, 'wb', encoding='utf-8')
f.write('<?xml version="1.0" encoding="utf-8" ?>\n')
self._dump_recurse(f, self.tree)
f.write('\n')
f.close()
f = vfs.open(filename)
self.tree = self.parse(f)
f.close()
if self.tree:
util.save_pickle(self.tree, vfs.getoverlay(filename + '.raw'))
def __init__(self, filename):
"""
Load the file and parse it. If the file does not exist, create
an empty <freevo> node.
"""
Parser.__init__(self)
self.filename = filename
if not vfs.isfile(filename):
self.tree = XMLnode('freevo')
else:
self.tree = None
cache = vfs.getoverlay(filename + '.raw')
if os.path.isfile(filename) and os.path.isfile(cache) and \
os.stat(cache)[stat.ST_MTIME] >= os.stat(filename)[stat.ST_MTIME]:
self.tree = util.read_pickle(cache)
if not self.tree:
f = vfs.open(filename)
self.tree = self.parse(f)
f.close()
if self.tree:
util.save_pickle(self.tree, cache)
def setup_DUC_sentences(task, parser=None, reload=False):
## load problems quickly from pickle file
if (not reload) and os.path.isfile(task.data_pickle):
sys.stderr.write('Loading [%s] problem data from [%s]\n' %(task.name, task.data_pickle))
task.problems = util.load_pickle(task.data_pickle)
return
## only parse sentences if needed
for problem in task.problems:
print problem.id
problem.load_documents()
if parser:
for doc in problem.new_docs:
doc.parse_sentences(parser)
if parser:
parser.run()
for sentence, parsetree in parser.parsed.items():
sentence.parsed = parsetree
## save pickled version for faster loading later
sys.stderr.write('Saving [%s] problem data in [%s]\n' %(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
def read_test_data(file):
# assume if one is saved they all are
if util.check_file_exists(CONST.DATASET_PATH + CONST.TEST_PATH):
T_Data = util.load(CONST.DATASET_PATH + CONST.TEST_PATH)
T_Labels = util.load(CONST.DATASET_PATH + CONST.TEST_PATH_LABELS)
T_Queries = util.load(CONST.DATASET_PATH + CONST.TEST_PATH_Q)
T_Docs = util.load(CONST.DATASET_PATH + CONST.TEST_PATH_DOCS)
else:
T_Data, T_Labels, T_Queries, T_Docs = read_train_data(file)
util.save_pickle(CONST.DATASET_PATH + CONST.TEST_PATH, T_Data)
util.save_pickle(CONST.DATASET_PATH + CONST.TEST_PATH_LABELS, T_Labels)
util.save_pickle(CONST.DATASET_PATH + CONST.TEST_PATH_Q, T_Queries)
util.save_pickle(CONST.DATASET_PATH + CONST.TEST_PATH_DOCS, T_Docs)
return T_Data, T_Labels, T_Queries, T_Docs
def prepare(self, features_k_nearest_neighbors, nonzero_indices = None, all_save_load = False, regenerate_neightborhood_indices = False):
#print np.shape(self.processor.pts3d_bound), 'shape pts3d_bound'
imgTmp = cv.cvCloneImage(self.processor.img)
self.imNP = ut.cv2np(imgTmp,format='BGR')
###self.processor.map2d = np.asarray(self.processor.camPts_bound) #copied from laser to image mapping
if features_k_nearest_neighbors == None or features_k_nearest_neighbors == False: #use range
self.kdtree2d = kdtree.KDTree(self.processor.pts3d_bound.T)
#print len(nonzero_indices)
#print np.shape(np.asarray((self.processor.pts3d_bound.T)[nonzero_indices]))
if nonzero_indices != None:
print ut.getTime(), 'query ball tree for ', len(nonzero_indices), 'points'
kdtree_query = kdtree.KDTree((self.processor.pts3d_bound.T)[nonzero_indices])
else:
print ut.getTime(), 'query ball tree'
kdtree_query = kdtree.KDTree(self.processor.pts3d_bound.T)
filename = self.processor.config.path+'/data/'+self.processor.scan_dataset.id+'_sphere_neighborhood_indices_'+str(self.processor.feature_radius)+'.pkl'
if all_save_load == True and os.path.exists(filename) and regenerate_neightborhood_indices == False:
#if its already there, load it:
print ut.getTime(), 'loading',filename
self.kdtree_queried_indices = ut.load_pickle(filename)
else:
self.kdtree_queried_indices = kdtree_query.query_ball_tree(self.kdtree2d, self.processor.feature_radius, 2.0, 0.2) #approximate
print ut.getTime(), 'queried kdtree: ',len(self.kdtree_queried_indices),'points, radius:',self.processor.feature_radius
if all_save_load == True:
ut.save_pickle(self.kdtree_queried_indices, filename)
#make dict out of list for faster operations? (doesn't seem to change speed significantly):
#self.kdtree_queried_indices = dict(zip(xrange(len(self.kdtree_queried_indices)), self.kdtree_queried_indices))
else: #experiemental: use_20_nearest_neighbors == True
#TODO: exclude invalid values in get_featurevector (uncomment code there)
self.kdtree2d = kdtree.KDTree(self.processor.pts3d_bound.T)
self.kdtree_queried_indices = []
print ut.getTime(), 'kdtree single queries for kNN start, k=', features_k_nearest_neighbors
count = 0
for point in ((self.processor.pts3d_bound.T)[nonzero_indices]):
count = count + 1
result = self.kdtree2d.query(point, features_k_nearest_neighbors,0.2,2,self.processor.feature_radius)
#existing = result[0][0] != np.Inf
#print existing
#print result[1]
self.kdtree_queried_indices += [result[1]] #[existing]
if count % 4096 == 0:
print ut.getTime(),count
print ut.getTime(), 'kdtree singe queries end'
#convert to numpy array -> faster access
self.kdtree_queried_indices = np.asarray(self.kdtree_queried_indices)
#print self.kdtree_queried_indices
#takes long to compute:
#avg_len = 0
#minlen = 999999
#maxlen = 0
#for x in self.kdtree_queried_indices:
# avg_len += len(x)
# minlen = min(minlen, len(x))
# maxlen = max(maxlen, len(x))
#avg_len = avg_len / len(self.kdtree_queried_indices)
#print ut.getTime(), "range neighbors: avg_len", avg_len, 'minlen', minlen, 'maxlen', maxlen
#create HSV numpy images:
# compute the hsv version of the image
image_size = cv.cvGetSize(self.processor.img)
img_h = cv.cvCreateImage (image_size, 8, 1)
img_s = cv.cvCreateImage (image_size, 8, 1)
img_v = cv.cvCreateImage (image_size, 8, 1)
img_hsv = cv.cvCreateImage (image_size, 8, 3)
cv.cvCvtColor (self.processor.img, img_hsv, cv.CV_BGR2HSV)
cv.cvSplit (img_hsv, img_h, img_s, img_v, None)
self.imNP_h = ut.cv2np(img_h)
self.imNP_s = ut.cv2np(img_s)
self.imNP_v = ut.cv2np(img_v)
textures = texture_features.eigen_texture(self.processor.img)
self.imNP_tex1 = textures[:,:,0]
self.imNP_tex2 = textures[:,:,1]
self.debug_before_first_featurevector = True
self.generate_voi_histogram(self.processor.point_of_interest,self.processor.voi_width)
def saveToCache(self):
logger.log( 9, 'saveToCache()')
util.save_pickle(self.elocationData, self.cacheElocation)
util.save_pickle(self.currentData, self.cacheCurrent)
util.save_pickle(self.forecastData, self.cacheForecast)
def cacheData(self, name, data):
if self.filename == "remote":
return None
save_pickle(self.filename + "." + name, data)
def write(self, filename): util.save_pickle(self.d, filename)
def save(self):
util.save_pickle(self.featdict, self.path + 'feats')
text.text_processor.load_splitta_model('lib/splitta/model_nb/')
# Skip update data
if task_name[:3] == 'tac':
framework.setup_TAC08(task, True)
elif task_name[:3] == 'duc':
framework.setup_DUC_basic(task, True)
elif task_name[:3] == 'new':
framework.setup_news(task)
else:
raise Exception('Unknown task %s' % task)
if task_name[:3] != 'new':
for problem in task.problems:
problem.load_documents()
## save pickled version for faster loading later
sys.stderr.write('Saving [%s] problem data in [%s]\n' %(task.name, task.data_pickle))
util.save_pickle(task.problems, task.data_pickle)
# Tokenize for parser
tokenizer = nltk.tokenize.treebank.TreebankWordTokenizer()
for problem in task.problems:
num_sents = sum([len(doc.sentences) for doc in problem.new_docs])
sys.stderr.write("%s %d %d\n" % (problem.id, len(problem.new_docs), num_sents))
if args.boundary:
with open('%s/%s.sentid' % (sent_path, problem.id), 'r') as fin, \
open('%s/%s.boundary' % (sent_path, problem.id), 'w') as fout:
sent_ids = [int(s.strip()) for s in fin.readlines()]
j = 0 # sent_ids index
for doc in problem.new_docs:
new_doc = True
if d == os.path.sep:
print 'ERROR: %s_ITEMS contains root directory, skipped.' % type
setattr(config, '%s_ITEMS' % type, [])
if os.path.isdir(os.path.join(config.FREEVO_CACHEDIR, 'playlists')):
config.AUDIO_ITEMS.append(('Playlists', os.path.join(config.FREEVO_CACHEDIR, 'playlists')))
delete_old_files_1()
delete_old_files_2()
# we have time here, don't use exif thumbnails
config.IMAGE_USE_EXIF_THUMBNAIL = 0
cache_directories(rebuild)
if config.CACHE_IMAGES:
cache_thumbnails()
create_metadata()
create_tv_pickle()
# close db
util.mediainfo.sync()
# save cache info
try:
import kaa.metadata.version
util.save_pickle((kaa.metadata.version.VERSION, VERSION, int(time.time()), complete_update), cachefile)
except ImportError:
print 'WARNING: please update kaa.metadata'
print
print 'caching complete after %s seconds' % (time.clock() - start)
def get_guide(popup=False, XMLTV_FILE=None):
"""
Get a TV guide from memory cache, file cache or raw XMLTV file.
Tries to return at least the channels from the config file if there
is no other data
"""
global cached_guide
if not XMLTV_FILE:
XMLTV_FILE = config.XMLTV_FILE
if popup:
import dialog.dialogs
popup_dialog = dialog.dialogs.ProgressDialog( _('Preparing the program guide'), indeterminate=True)
# Can we use the cached version (if same as the file)?
if (cached_guide == None or
(os.path.isfile(XMLTV_FILE) and
cached_guide.timestamp != os.path.getmtime(XMLTV_FILE))):
# No, is there a pickled version ("file cache") in a file?
pname = '%s/TV.xml.pickled' % config.FREEVO_CACHEDIR
got_cached_guide = False
if (os.path.isfile(XMLTV_FILE) and
os.path.isfile(pname) and (os.path.getmtime(pname) > os.path.getmtime(XMLTV_FILE))):
logger.debug('XMLTV, reading cached file (%s)', pname)
if popup:
popup_dialog.show()
inprogress = kaa.ThreadCallable(util.read_pickle, pname)()
inprogress.wait()
cached_guide = inprogress.result
else:
cached_guide = util.read_pickle(pname)
epg_ver = None
try:
epg_ver = cached_guide.EPG_VERSION
except AttributeError:
logger.debug('EPG does not have a version number, must be reloaded')
if epg_ver != EPG_VERSION:
logger.debug('EPG version missmatch, must be reloaded')
elif cached_guide.timestamp != os.path.getmtime(XMLTV_FILE):
# Hmmm, weird, there is a pickled file newer than the TV.xml
# file, but the timestamp in it does not match the TV.xml
# timestamp. We need to reload!
logger.debug('EPG: Pickled file timestamp mismatch, reloading!')
else:
logger.info('XMLTV, got cached guide (version %s).', epg_ver)
got_cached_guide = True
if not got_cached_guide:
# Need to reload the guide
logger.debug('XMLTV, trying to read raw file (%s)', XMLTV_FILE)
try:
if popup:
popup_dialog.set_indeterminate(False)
popup_dialog.show()
inprogress = kaa.ThreadCallable(load_guide, XMLTV_FILE, popup_dialog)()
inprogress.wait()
cached_guide = inprogress.result
popup_dialog.set_indeterminate(True)
else:
cached_guide = load_guide(XMLTV_FILE)
except:
# Don't violently crash on a incomplete or empty TV.xml please.
cached_guide = None
print
print String(_("Couldn't load the TV Guide, got an exception!"))
print
traceback.print_exc()
else:
# Replace config.XMLTV_FILE before we save the pickle in order
# to avoid timestamp confision.
if XMLTV_FILE != config.XMLTV_FILE:
logger.info('copying %r -> %r', XMLTV_FILE, config.XMLTV_FILE)
shutil.copyfile(XMLTV_FILE, config.XMLTV_FILE)
os.unlink(XMLTV_FILE)
cached_guide.timestamp = os.path.getmtime(config.XMLTV_FILE)
# Dump a pickled version for later reads
if popup:
kaa.ThreadCallable(util.save_pickle, cached_guide, pname)().wait()
else:
util.save_pickle(cached_guide, pname)
if not cached_guide:
# An error occurred, return an empty guide
cached_guide = TvGuide()
if popup:
popup_dialog.hide()
return cached_guide
def saveMameRomList(mameRomList):
if not mameRomList or mameRomList == None:
mameRomList = mame_types.MameRomList()
util.save_pickle(mameRomList, config.GAMES_MAME_CACHE)
