def train_model(self, f_train, train_args, f_test, test_args, f_validate, validation_args,
n_train_batches=600, n_valid_batches=1, n_test_batches=1, n_epochs=100, anneal=None):
self.write_to_logger("### MODEL PARAMS ###")
self.write_to_logger(self.model.model_info())
self.write_to_logger("### TRAINING PARAMS ###")
self.write_to_logger(
"Train -> %s: %s" % (";".join(train_args['inputs'].keys()), str(train_args['inputs'].values())))
self.write_to_logger(
"Test -> %s: %s" % (";".join(test_args['inputs'].keys()), str(test_args['inputs'].values())))
if anneal is not None:
for t in anneal:
key, freq, rate, min_val = t
self.write_to_logger(
"Anneal %s %0.4f after %i epochs with minimum value %f." % (key, rate, int(freq), min_val))
self.write_to_logger("### TRAINING MODEL ###")
if self.custom_eval_func is not None:
self.custom_eval_func(self.model, paths.get_custom_eval_path(0, self.model.root_path))
done_looping = False
epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch += 1
start_time = time.time()
train_outputs = []
for i in xrange(n_train_batches):
train_output = f_train(i, *train_args['inputs'].values())
train_outputs.append(train_output)
self.eval_train[epoch] = np.mean(np.array(train_outputs), axis=0)
self.model.after_epoch()
end_time = time.time() - start_time
if anneal is not None:
for t in anneal:
key, freq, rate, min_val = t
new_val = train_args['inputs'][key] * rate
if new_val < min_val:
train_args['inputs'][key] = min_val
elif epoch % freq == 0:
train_args['inputs'][key] = new_val
if epoch % self.output_freq == 0:
if n_test_batches == 1:
self.eval_test[epoch] = f_test(*test_args['inputs'].values())
else:
test_outputs = []
for i in xrange(n_test_batches):
test_output = f_test(i, *test_args['inputs'].values())
test_outputs.append(test_output)
self.eval_test[epoch] = np.mean(np.array(test_outputs), axis=0)
if f_validate is not None:
if n_valid_batches == 1:
self.eval_validation[epoch] = f_validate(*validation_args['inputs'].values())
else:
valid_outputs = []
for i in xrange(n_valid_batches):
valid_output = f_validate(i, *validation_args['inputs'].values())
valid_outputs.append(valid_output)
self.eval_validation[epoch] = np.mean(np.array(valid_outputs), axis=0)
else:
self.eval_validation[epoch] = [0.] * len(validation_args['outputs'].keys())
# Formatting the output string from the generic and the user-defined values.
output_str = "epoch=%0" + str(len(str(n_epochs))) + "i; time=%0.2f;"
output_str %= (epoch, end_time)
def concatenate_output_str(out_str, d):
for k, v in zip(d.keys(), d.values()):
out_str += " %s=%s;" % (k, v)
return out_str
output_str = concatenate_output_str(output_str, train_args['outputs'])
output_str = concatenate_output_str(output_str, test_args['outputs'])
output_str = concatenate_output_str(output_str, validation_args['outputs'])
outputs = [float(o) for o in self.eval_train[epoch]]
outputs += [float(o) for o in self.eval_test[epoch]]
outputs += [float(o) for o in self.eval_validation[epoch]]
output_str %= tuple(outputs)
self.write_to_logger(output_str)
if self.pickle_f_custom_freq is not None and epoch % self.pickle_f_custom_freq == 0:
if self.custom_eval_func is not None:
self.custom_eval_func(self.model, paths.get_custom_eval_path(epoch, self.model.root_path))
self.plot_eval(self.eval_train, train_args['outputs'].keys(), "_train")
self.plot_eval(self.eval_test, test_args['outputs'].keys(), "_test")
self.plot_eval(self.eval_validation, validation_args['outputs'].keys(), "_validation")
self.dump_dicts()
self.model.dump_model()
if self.pickle_f_custom_freq is not None:
self.model.dump_model()
def train_model(self,
f_train,
train_args,
f_test,
test_args,
f_validate,
validation_args,
n_train_batches=600,
n_valid_batches=1,
n_test_batches=1,
n_epochs=100):
self.write_to_logger("### MODEL PARAMS ###")
self.write_to_logger(self.model.model_info())
self.write_to_logger("### TRAINING PARAMS ###")
self.write_to_logger("Train -> %s: %s" % (";".join(
train_args['inputs'].keys()), str(train_args['inputs'].values())))
self.write_to_logger("Test -> %s: %s" % (";".join(
test_args['inputs'].keys()), str(test_args['inputs'].values())))
self.write_to_logger("Anneal LR %0.4f after %i." %
(self.anneal_lr, int(self.anneal_lr_freq)))
self.write_to_logger("### TRAINING MODEL ###")
done_looping = False
epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch += 1
if epoch % self.anneal_lr_freq == 0:
train_args['inputs']['learningrate'] *= self.anneal_lr
start_time = time.time()
train_outputs = []
for i in xrange(n_train_batches):
train_output = f_train(i, *train_args['inputs'].values())
train_outputs.append(train_output)
self.eval_train[epoch] = np.mean(np.array(train_outputs), axis=0)
self.model.after_epoch()
end_time = time.time() - start_time
if epoch % self.output_freq == 0:
if n_test_batches == 1:
self.eval_test[epoch] = f_test(
*test_args['inputs'].values())
else:
test_outputs = []
for i in xrange(n_test_batches):
test_output = f_test(i, *test_args['inputs'].values())
test_outputs.append(test_output)
self.eval_test[epoch] = np.mean(np.array(test_outputs),
axis=0)
if f_validate is not None:
if n_valid_batches == 1:
self.eval_validation[epoch] = f_validate(
*validation_args['inputs'].values())
else:
valid_outputs = []
for i in xrange(n_valid_batches):
valid_output = f_validate(
i, *validation_args['inputs'].values())
valid_outputs.append(valid_output)
self.eval_validation[epoch] = np.mean(
np.array(valid_outputs), axis=0)
else:
self.eval_validation[epoch] = [0.] * len(
validation_args['outputs'].keys())
output_str = '[epoch,time,train[%s],test[%s],valid[%s]];%i;%0.2f;' % \
(",".join(train_args['outputs'].keys()),
",".join(test_args['outputs'].keys()),
",".join(validation_args['outputs'].keys()), epoch, end_time)
output_str += ";".join(train_args['outputs'].values()) + ";" + \
";".join(test_args['outputs'].values()) + ";" + \
";".join(validation_args['outputs'].values())
outputs = [float(o) for o in self.eval_train[epoch]]
outputs += [float(o) for o in self.eval_test[epoch]]
outputs += [float(o) for o in self.eval_validation[epoch]]
output_str %= tuple(outputs)
self.write_to_logger(output_str)
if self.pickle_f_custom_freq is not None and epoch % self.pickle_f_custom_freq == 0:
if self.custom_eval_func is not None:
self.custom_eval_func(
self.model,
paths.get_custom_eval_path(epoch,
self.model.root_path))
self.plot_eval(self.eval_train, train_args['outputs'].keys(),
"_train")
self.plot_eval(self.eval_test, test_args['outputs'].keys(),
"_test")
self.plot_eval(self.eval_validation,
validation_args['outputs'].keys(),
"_validation")
self.dump_dicts()
self.model.dump_model()
if self.pickle_f_custom_freq is not None:
self.model.dump_model()
def train_model(self, f_train, train_args, f_test, test_args, f_validate, validation_args,
n_train_batches=600, n_valid_batches=1, n_test_batches=1, n_epochs=100):
self.write_to_logger("### MODEL PARAMS ###")
self.write_to_logger(self.model.model_info())
self.write_to_logger("### TRAINING PARAMS ###")
self.write_to_logger("Train -> %s: %s" % (";".join(train_args['inputs'].keys()), str(train_args['inputs'].values())))
self.write_to_logger("Test -> %s: %s" % (";".join(test_args['inputs'].keys()), str(test_args['inputs'].values())))
self.write_to_logger("Anneal LR %0.4f after %i."%(self.anneal_lr, int(self.anneal_lr_freq)))
self.write_to_logger("### TRAINING MODEL ###")
done_looping = False
epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch += 1
if epoch % self.anneal_lr_freq == 0:
train_args['inputs']['learningrate'] *= self.anneal_lr
start_time = time.time()
train_outputs = []
for i in xrange(n_train_batches):
train_output = f_train(i, *train_args['inputs'].values())
train_outputs.append(train_output)
self.eval_train[epoch] = np.mean(np.array(train_outputs), axis=0)
self.model.after_epoch()
end_time = time.time() - start_time
if epoch % self.output_freq == 0:
if n_test_batches == 1:
self.eval_test[epoch] = f_test(*test_args['inputs'].values())
else:
test_outputs = []
for i in xrange(n_test_batches):
test_output = f_test(i, *test_args['inputs'].values())
test_outputs.append(test_output)
self.eval_test[epoch] = np.mean(np.array(test_outputs), axis=0)
if f_validate is not None:
if n_valid_batches == 1:
self.eval_validation[epoch] = f_validate(*validation_args['inputs'].values())
else:
valid_outputs = []
for i in xrange(n_valid_batches):
valid_output = f_validate(i, *validation_args['inputs'].values())
valid_outputs.append(valid_output)
self.eval_validation[epoch] = np.mean(np.array(valid_outputs), axis=0)
else:
self.eval_validation[epoch] = [0.] * len(validation_args['outputs'].keys())
output_str = '[epoch,time,train[%s],test[%s],valid[%s]];%i;%0.2f;' % \
(",".join(train_args['outputs'].keys()),
",".join(test_args['outputs'].keys()),
",".join(validation_args['outputs'].keys()), epoch, end_time)
output_str += ";".join(train_args['outputs'].values()) + ";" + \
";".join(test_args['outputs'].values()) + ";" + \
";".join(validation_args['outputs'].values())
outputs = [float(o) for o in self.eval_train[epoch]]
outputs += [float(o) for o in self.eval_test[epoch]]
outputs += [float(o) for o in self.eval_validation[epoch]]
output_str %= tuple(outputs)
self.write_to_logger(output_str)
if self.pickle_f_custom_freq is not None and epoch % self.pickle_f_custom_freq == 0:
if self.custom_eval_func is not None:
self.custom_eval_func(self.model, paths.get_custom_eval_path(epoch, self.model.root_path))
self.plot_eval(self.eval_train, train_args['outputs'].keys(), "_train")
self.plot_eval(self.eval_test, test_args['outputs'].keys(), "_test")
self.plot_eval(self.eval_validation, validation_args['outputs'].keys(), "_validation")
self.dump_dicts()
self.model.dump_model()
if self.pickle_f_custom_freq is not None:
self.model.dump_model()
def train_model(self,
f_train,
train_args,
f_test,
test_args,
f_validate,
validation_args,
n_train_batches=600,
n_valid_batches=1,
n_test_batches=1,
n_epochs=100,
anneal=None):
self.write_to_logger("### MODEL PARAMS ###")
self.write_to_logger(self.model.model_info())
self.write_to_logger("### TRAINING PARAMS ###")
self.write_to_logger("Train -> %s: %s" %
(";".join(list(train_args['inputs'].keys())),
str(list(train_args['inputs'].values()))))
self.write_to_logger("Test -> %s: %s" %
(";".join(list(test_args['inputs'].keys())),
str(list(test_args['inputs'].values()))))
if anneal is not None:
for t in anneal:
key, freq, rate, min_val = t
if isinstance(rate, int) or isinstance(rate, float):
self.write_to_logger(
"Anneal %s %0.4f after %i epochs with minimum value %f."
% (key, rate, int(freq), min_val))
self.write_to_logger("### TRAINING MODEL ###")
if self.custom_eval_func is not None:
self.custom_eval_func(
self.model, paths.get_custom_eval_path(0,
self.model.root_path))
done_looping = False
epoch = 0
while (epoch < n_epochs) and (not done_looping):
epoch += 1
start_time = time.time()
train_outputs = []
for i in range(n_train_batches):
train_output = f_train(i, *list(train_args['inputs'].values()))
train_outputs.append(train_output)
self.eval_train[epoch] = np.mean(np.array(train_outputs), axis=0)
self.model.after_epoch()
end_time = time.time() - start_time
if anneal is not None:
for t in anneal:
key, freq, rate, min_val = t
if isinstance(rate, int) or isinstance(rate, float):
new_val = train_args['inputs'][key] * rate
else:
new_val = rate(train_args['inputs'][key])
if new_val < min_val:
train_args['inputs'][key] = min_val
elif epoch % freq == 0:
train_args['inputs'][key] = new_val
if epoch % self.output_freq == 0:
if n_test_batches == 1:
self.eval_test[epoch] = f_test(
*list(test_args['inputs'].values()))
else:
test_outputs = []
for i in range(n_test_batches):
test_output = f_test(
i, *list(test_args['inputs'].values()))
test_outputs.append(test_output)
self.eval_test[epoch] = np.mean(np.array(test_outputs),
axis=0)
if f_validate is not None:
if n_valid_batches == 1:
self.eval_validation[epoch] = f_validate(
*list(validation_args['inputs'].values()))
else:
valid_outputs = []
for i in range(n_valid_batches):
valid_output = f_validate(
i, *list(validation_args['inputs'].values()))
valid_outputs.append(valid_output)
self.eval_validation[epoch] = np.mean(
np.array(valid_outputs), axis=0)
else:
self.eval_validation[epoch] = [0.] * len(
list(validation_args['outputs'].keys()))
# Formatting the output string from the generic and the user-defined values.
output_str = "epoch=%0" + str(len(
str(n_epochs))) + "i; time=%0.2f;"
output_str %= (epoch, end_time)
def concatenate_output_str(out_str, d):
for k, v in zip(list(d.keys()), list(d.values())):
out_str += " %s=%s;" % (k, v)
return out_str
output_str = concatenate_output_str(output_str,
train_args['outputs'])
output_str = concatenate_output_str(output_str,
test_args['outputs'])
output_str = concatenate_output_str(output_str,
validation_args['outputs'])
outputs = [float(o) for o in self.eval_train[epoch]]
outputs += [float(o) for o in self.eval_test[epoch]]
outputs += [float(o) for o in self.eval_validation[epoch]]
output_str %= tuple(outputs)
self.write_to_logger(output_str)
if self.pickle_f_custom_freq is not None and epoch % self.pickle_f_custom_freq == 0:
if self.custom_eval_func is not None:
self.custom_eval_func(
self.model,
paths.get_custom_eval_path(epoch,
self.model.root_path))
self.plot_eval(self.eval_train,
list(train_args['outputs'].keys()), "_train")
self.plot_eval(self.eval_test,
list(test_args['outputs'].keys()), "_test")
self.plot_eval(self.eval_validation,
list(validation_args['outputs'].keys()),
"_validation")
self.dump_dicts()
self.model.dump_model()
if self.pickle_f_custom_freq is not None:
self.model.dump_model()