def get_depths(self):
# return input images and predictions
def detach_tensor(tensor):
return tensor.cpu().detach().numpy()
tensorImage, disparities, masks, imageNetTensor, dataset_ids = next(
iter(self.data_loader))
tensorImage = tensorImage.to(device, non_blocking=True)
disparities = disparities.to(device, non_blocking=True)
masks = masks.to(device, non_blocking=True)
# pretrained networks from 3D KBE were trained with image normalized between 0 and 1
if self.eval_pretrained:
tensorImage = (tensorImage + 1) / 2
tensorResized = resize_image(tensorImage)
# retrieve parameters for different sets of images
tensorFocal = torch.Tensor([
self.dataset_paths[int(id.item())]['params']['focal']
for id in dataset_ids
])
tensorBaseline = torch.Tensor([
self.dataset_paths[int(id.item())]['params']['baseline']
for id in dataset_ids
])
tensorFocal = tensorFocal.view(-1, 1).repeat(
1, 1,
tensorImage.size(2) *
tensorImage.size(3)).view(*disparities.size())
tensorBaseline = tensorBaseline.view(-1, 1).repeat(
1, 1,
tensorImage.size(2) *
tensorImage.size(3)).view(*disparities.size())
tensorBaseline = tensorBaseline.to(device)
tensorFocal = tensorFocal.to(device)
tensorDisparity = self.moduleDisparity(
tensorResized,
self.moduleSemantics(tensorResized)) # depth estimation
objectPredictions = self.moduleMaskrcnn(
tensorImage) # segment image in mask using Mask-RCNN
tensorDisparityAdjusted = tensorDisparity
tensorDisparityRefined = self.moduleRefine(
tensorImage[:2, :, :, :],
tensorDisparityAdjusted[:2, :, :, :]) # increase resolution
return (detach_tensor(tensorDisparity),
detach_tensor(tensorDisparityAdjusted),
detach_tensor(tensorDisparityRefined),
detach_tensor(disparities),
detach_tensor(resize_image(disparities, max_size=256)),
detach_tensor((tensorImage.permute(0, 2, 3, 1) + 1) / 2),
objectPredictions, detach_tensor(masks),
detach_tensor(resize_image(masks, max_size=256)))
def get_map_txt(self, image_id, image, class_names, map_out_path):
f = open(os.path.join(map_out_path, "detection-results/"+image_id+".txt"),"w")
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1],self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，并进行归一化
#---------------------------------------------------------#
image_data = np.expand_dims(preprocess_input(np.array(image_data, dtype='float32')), 0)
out_boxes, out_scores, out_classes = self.sess.run(
[self.boxes, self.scores, self.classes],
feed_dict={
self.yolo_model.input: image_data,
self.input_image_shape: [image.size[1], image.size[0]],
K.learning_phase(): 0
})
for i, c in enumerate(out_classes):
predicted_class = self.class_names[int(c)]
score = str(out_scores[i])
top, left, bottom, right = out_boxes[i]
if predicted_class not in class_names:
continue
f.write("%s %s %s %s %s %s\n" % (predicted_class, score[:6], str(int(left)), str(int(top)), str(int(right)),str(int(bottom))))
f.close()
return
def get_FPS(self, image, test_interval):
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1], self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
#---------------------------------------------------------#
image_data = preprocess_input(np.expand_dims(np.array(image_data, dtype='float32'), 0))
preds = self.get_pred(image_data).numpy()
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
results = self.bbox_util.decode_box(preds, self.anchors, image_shape,
self.input_shape, self.letterbox_image, confidence=self.confidence)
t1 = time.time()
for _ in range(test_interval):
preds = self.get_pred(image_data).numpy()
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
results = self.bbox_util.decode_box(preds, self.anchors, image_shape,
self.input_shape, self.letterbox_image, confidence=self.confidence)
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_FPS(self, image, test_interval):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1], self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，并进行归一化
#---------------------------------------------------------#
image_data = np.expand_dims(preprocess_input(np.array(image_data, dtype='float32')), 0)
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
input_image_shape = np.expand_dims(np.array([image.size[1], image.size[0]], dtype='float32'), 0)
out_boxes, out_scores, out_classes = self.get_pred(image_data, input_image_shape)
t1 = time.time()
for _ in range(test_interval):
out_boxes, out_scores, out_classes = self.get_pred(image_data, input_image_shape)
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_FPS(self, image, test_interval):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data, nw, nh = resize_image(
image, (self.input_shape[1], self.input_shape[0]))
#---------------------------------------------------------#
# 添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(
np.transpose(preprocess_input(np.array(image_data, np.float32)),
(2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
pr = self.net(images)[0]
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = F.softmax(pr.permute(1, 2, 0),
dim=-1).cpu().numpy().argmax(axis=-1)
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
t1 = time.time()
for _ in range(test_interval):
with torch.no_grad():
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
pr = self.net(images)[0]
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = F.softmax(pr.permute(1, 2, 0),
dim=-1).cpu().numpy().argmax(axis=-1)
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_map_txt(self, image_id, image, class_names, map_out_path):
f = open(
os.path.join(map_out_path,
"detection-results/" + image_id + ".txt"), "w")
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image,
(self.input_shape[1], self.input_shape[0]),
self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
#---------------------------------------------------------#
image_data = preprocess_input(
np.expand_dims(np.array(image_data, dtype='float32'), 0))
preds = self.m2det.predict(image_data)
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
results = self.bbox_util.decode_box(preds,
self.anchors,
image_shape,
self.input_shape,
self.letterbox_image,
confidence=self.confidence)
#--------------------------------------#
# 如果没有检测到物体，则返回原图
#--------------------------------------#
if len(results[0]) <= 0:
return
top_label = results[0][:, 4]
top_conf = results[0][:, 5]
top_boxes = results[0][:, :4]
for i, c in list(enumerate(top_label)):
predicted_class = self.class_names[int(c)]
box = top_boxes[i]
score = str(top_conf[i])
top, left, bottom, right = box
if predicted_class not in class_names:
continue
f.write("%s %s %s %s %s %s\n" %
(predicted_class, score[:6], str(int(left)), str(
int(top)), str(int(right)), str(int(bottom))))
f.close()
return
def get_FPS(self, image, test_interval):
#---------------------------------------------------#
# 获得输入图片的高和宽
#---------------------------------------------------#
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image,
(self.input_shape[1], self.input_shape[0]),
self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
#---------------------------------------------------------#
image_data = np.expand_dims(
preprocess_input(np.array(image_data, dtype='float32')), 0)
outputs = self.centernet.predict(image_data)
#--------------------------------------------------------------------------------------------#
# centernet后处理的过程，包括门限判断和传统非极大抑制。
# 对于centernet网络来讲，确立中心非常重要。对于大目标而言，会存在许多的局部信息。
# 此时大目标中心点比较难以确定。使用最大池化的非极大抑制方法无法去除局部框
# 这里面存在传统的nms处理方法，可以选择关闭和开启。
# 实际测试中，hourglass为主干网络时有无额外的nms相差不大，resnet相差较大。
#--------------------------------------------------------------------------------------------#
results = self.bbox_util.postprocess(outputs,
self.nms,
image_shape,
self.input_shape,
self.letterbox_image,
confidence=self.confidence)
t1 = time.time()
for _ in range(test_interval):
outputs = self.centernet.predict(image_data)
#--------------------------------------------------------------------------------------------#
# centernet后处理的过程，包括门限判断和传统非极大抑制。
# 对于centernet网络来讲，确立中心非常重要。对于大目标而言，会存在许多的局部信息。
# 此时大目标中心点比较难以确定。使用最大池化的非极大抑制方法无法去除局部框
# 这里面存在传统的nms处理方法，可以选择关闭和开启。
# 实际测试中，hourglass为主干网络时有无额外的nms相差不大，resnet相差较大。
#--------------------------------------------------------------------------------------------#
results = self.bbox_util.postprocess(outputs,
self.nms,
image_shape,
self.input_shape,
self.letterbox_image,
confidence=self.confidence)
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_map_txt(self, image_id, image, class_names, map_out_path):
f = open(os.path.join(map_out_path, "detection-results/" + image_id + ".txt"), "w")
# ---------------------------------------------------#
# 获得输入图片的高和宽
# ---------------------------------------------------#
image_shape = np.array(np.shape(image)[0:2])
# ---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
# ---------------------------------------------------------#
image = cvtColor(image)
# ---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
# ---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1], self.input_shape[0]), self.letterbox_image)
# ---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
# ---------------------------------------------------------#
image_data = np.expand_dims(preprocess_input(np.array(image_data, dtype='float32')), 0)
outputs = self.get_pred(image_data).numpy()
# --------------------------------------------------------------------------------------------#
# centernet后处理的过程，包括门限判断和传统非极大抑制。
# 对于centernet网络来讲，确立中心非常重要。对于大目标而言，会存在许多的局部信息。
# 此时大目标中心点比较难以确定。使用最大池化的非极大抑制方法无法去除局部框
# 这里面存在传统的nms处理方法，可以选择关闭和开启。
# 实际测试中，hourglass为主干网络时有无额外的nms相差不大，resnet相差较大。
# --------------------------------------------------------------------------------------------#
results = self.bbox_util.postprocess(outputs, self.nms, image_shape, self.input_shape, self.letterbox_image,
confidence=self.confidence)
# --------------------------------------#
# 如果没有检测到物体，则返回原图
# --------------------------------------#
if results[0] is None:
return
top_label = np.array(results[0][:, 5], dtype='int32')
top_conf = results[0][:, 4]
top_boxes = results[0][:, :4]
for i, c in list(enumerate(top_label)):
predicted_class = self.class_names[int(c)]
box = top_boxes[i]
score = str(top_conf[i])
top, left, bottom, right = box
if predicted_class not in class_names:
continue
f.write("%s %s %s %s %s %s\n" % (
predicted_class, score[:6], str(int(left)), str(int(top)), str(int(right)), str(int(bottom))))
f.close()
return
def detect_heatmap(self, image, heatmap_save_path):
import cv2
import matplotlib.pyplot as plt
def sigmoid(x):
y = 1.0 / (1.0 + np.exp(-x))
return y
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image,
(self.input_shape[1], self.input_shape[0]),
self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，并进行归一化
#---------------------------------------------------------#
image_data = np.expand_dims(
preprocess_input(np.array(image_data, dtype='float32')), 0)
output = self.yolo_model.predict(image_data)
plt.imshow(image, alpha=1)
plt.axis('off')
mask = np.zeros((image.size[1], image.size[0]))
for sub_output in output:
b, h, w, c = np.shape(sub_output)
sub_output = np.reshape(sub_output, [b, h, w, 3, -1])[0]
score = np.max(sigmoid(sub_output[..., 4]), -1)
score = cv2.resize(score, (image.size[0], image.size[1]))
normed_score = (score * 255).astype('uint8')
mask = np.maximum(mask, normed_score)
plt.imshow(mask, alpha=0.5, interpolation='nearest', cmap="jet")
plt.axis('off')
plt.subplots_adjust(top=1,
bottom=0,
right=1,
left=0,
hspace=0,
wspace=0)
plt.margins(0, 0)
plt.savefig(heatmap_save_path,
dpi=200,
bbox_inches='tight',
pad_inches=-0.1)
print("Save to the " + heatmap_save_path)
plt.show()
def thread_function(input_image, width, height, out_path):
image = utils.read_image(input_image)
if resize_images is not None:
image = utils.resize_image(image, width, height)
# remove all backgrounds
if should_remove_backgrounds:
image = utils.remove_background(image)
utils.save_image(out_path, image)
def postprocess_image(img_path, mask_path, output_dir=None):
image = cv2.imread(img_path)
mask = cv2.imread(mask_path, 0)
resized_image = resize_image(image, expected_size=512, pad_value=0)
ret, thresh1 = cv2.threshold(mask, 1, 255, cv2.THRESH_BINARY)
resized_mask = resize_image(thresh1, expected_size=512, pad_value=0)
masked_image = cv2.bitwise_and(resized_image,
resized_image,
mask=resized_mask)
name, ext = osp.splitext(osp.basename(mask_path))
if output_dir is None:
output_dir = osp.split(mask_path)[0]
no_bcg_path = osp.join(output_dir, (name + '_no_bcg' + ext))
resized_mask_path = osp.join(output_dir, (name + '_no_bcg_mask' + ext))
cv2.imwrite(str(resized_mask_path), resized_mask)
cv2.imwrite(str(no_bcg_path), masked_image)
print('Outputs were written to %s' % output_dir)
def get_map_txt(self, image_id, image, class_names, map_out_path):
f = open(os.path.join(map_out_path, "detection-results/"+image_id+".txt"),"w")
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1], self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
#---------------------------------------------------------#
image_data = np.expand_dims(np.transpose(preprocess_input(np.array(image_data, dtype='float32')), (2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------------#
# 传入网络当中进行预测
#---------------------------------------------------------#
_, regression, classification, anchors = self.net(images)
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
outputs = decodebox(regression, anchors, self.input_shape)
results = non_max_suppression(torch.cat([outputs, classification], axis=-1), self.input_shape,
image_shape, self.letterbox_image, conf_thres = self.confidence, nms_thres = self.nms_iou)
if results[0] is None:
return
top_label = np.array(results[0][:, 5], dtype = 'int32')
top_conf = results[0][:, 4]
top_boxes = results[0][:, :4]
for i, c in list(enumerate(top_label)):
predicted_class = self.class_names[int(c)]
box = top_boxes[i]
score = str(top_conf[i])
top, left, bottom, right = box
if predicted_class not in class_names:
continue
f.write("%s %s %s %s %s %s\n" % (predicted_class, score[:6], str(int(left)), str(int(top)), str(int(right)),str(int(bottom))))
f.close()
return
def get_FPS(self, image, test_interval):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
#---------------------------------------------------------#
image_data, nw, nh = resize_image(
image, (self.input_shape[1], self.input_shape[0]))
#---------------------------------------------------------#
# 归一化+添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(
preprocess_input(np.array(image_data, np.float32)), 0)
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
pr = self.model.predict(image_data)[0]
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = pr.argmax(axis=-1).reshape(
[self.input_shape[0], self.input_shape[1]])
t1 = time.time()
for _ in range(test_interval):
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
pr = self.model.predict(image_data)[0]
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = pr.argmax(axis=-1).reshape(
[self.input_shape[0], self.input_shape[1]])
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_FPS(self, image, test_interval):
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1], self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，图片预处理，归一化。
#---------------------------------------------------------#
image_data = np.expand_dims(np.transpose(preprocess_input(np.array(image_data, dtype='float32')), (2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------------#
# 传入网络当中进行预测
#---------------------------------------------------------#
_, regression, classification, anchors = self.net(images)
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
outputs = decodebox(regression, anchors, self.input_shape)
results = non_max_suppression(torch.cat([outputs, classification], axis=-1), self.input_shape,
image_shape, self.letterbox_image, conf_thres = self.confidence, nms_thres = self.nms_iou)
t1 = time.time()
for _ in range(test_interval):
with torch.no_grad():
#---------------------------------------------------------#
# 传入网络当中进行预测
#---------------------------------------------------------#
_, regression, classification, anchors = self.net(images)
#-----------------------------------------------------------#
# 将预测结果进行解码
#-----------------------------------------------------------#
outputs = decodebox(regression, anchors, self.input_shape)
results = non_max_suppression(torch.cat([outputs, classification], axis=-1), self.input_shape,
image_shape, self.letterbox_image, conf_thres = self.confidence, nms_thres = self.nms_iou)
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def get_miou_png(self, image):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
orininal_h = np.array(image).shape[0]
orininal_w = np.array(image).shape[1]
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data, nw, nh = resize_image(
image, (self.input_shape[1], self.input_shape[0]))
#---------------------------------------------------------#
# 添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(
np.transpose(preprocess_input(np.array(image_data, np.float32)),
(2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
pr = self.net(images)[0]
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = F.softmax(pr.permute(1, 2, 0), dim=-1).cpu().numpy()
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
#---------------------------------------------------#
# 进行图片的resize
#---------------------------------------------------#
pr = cv2.resize(pr, (orininal_w, orininal_h),
interpolation=cv2.INTER_LINEAR)
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = pr.argmax(axis=-1)
image = Image.fromarray(np.uint8(pr))
return image
def detect_image(self, image_1, image_2):
image_1 = resize_image(image_1,
[self.input_shape[1], self.input_shape[0]],
self.letterbox_image)
image_2 = resize_image(image_2,
[self.input_shape[1], self.input_shape[0]],
self.letterbox_image)
photo_1 = np.expand_dims(
preprocess_input(np.array(image_1, np.float32)), 0)
photo_2 = np.expand_dims(
preprocess_input(np.array(image_2, np.float32)), 0)
#---------------------------------------------------#
# 图片传入网络进行预测
#---------------------------------------------------#
output1 = self.model.predict(photo_1)
output2 = self.model.predict(photo_2)
#---------------------------------------------------#
# 计算二者之间的距离
#---------------------------------------------------#
l1 = np.linalg.norm(output1 - output2, axis=1)
# l1 = np.sum(np.square(output1 - output2), axis=-1)
plt.subplot(1, 2, 1)
plt.imshow(np.array(image_1))
plt.subplot(1, 2, 2)
plt.imshow(np.array(image_2))
plt.text(-12,
-12,
'Distance:%.3f' % l1,
ha='center',
va='bottom',
fontsize=11)
plt.show()
return l1
def _crop_bounding_boxes(self, image_array, assigned_data):
data = self._select_samples(assigned_data)
data = np.concatenate(data, axis=0)
images = []
classes = []
for object_arg in range(len(data)):
object_data = data[object_arg]
cropped_array = self._crop_bounding_box(image_array, object_data)
if 0 in cropped_array.shape:
continue
cropped_array = resize_image(cropped_array, self.image_size)
images.append(cropped_array.astype('float32'))
classes.append(data[object_arg][4:])
return images, classes
def get_FPS(self, image, test_interval):
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data, image_metas, windows = resize_image([np.array(image)],
self.config)
#---------------------------------------------------------#
# 根据当前输入图像的大小，生成先验框
#---------------------------------------------------------#
anchors = np.expand_dims(get_anchors(self.config, image_data[0].shape),
0)
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
detections, _, _, mrcnn_mask, _, _, _ = self.model.predict(
[image_data, image_metas, anchors], verbose=0)
#---------------------------------------------------#
# 上面获得的预测结果是相对于padding后的图片的
# 我们需要将预测结果转换到原图上
#---------------------------------------------------#
box_thre, class_thre, class_ids, masks_arg, masks_sigmoid = postprocess(
detections[0], mrcnn_mask[0], image_shape, image_data[0].shape,
windows[0])
t1 = time.time()
for _ in range(test_interval):
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
detections, _, _, mrcnn_mask, _, _, _ = self.model.predict(
[image_data, image_metas, anchors], verbose=0)
#---------------------------------------------------#
# 上面获得的预测结果是相对于padding后的图片的
# 我们需要将预测结果转换到原图上
#---------------------------------------------------#
box_thre, class_thre, class_ids, masks_arg, masks_sigmoid = postprocess(
detections[0], mrcnn_mask[0], image_shape, image_data[0].shape,
windows[0])
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def detect_heatmap(self, image, heatmap_save_path):
import cv2
import matplotlib.pyplot as plt
def sigmoid(x):
y = 1.0 / (1.0 + np.exp(-x))
return y
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1],self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(np.transpose(preprocess_input(np.array(image_data, dtype='float32')), (2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
outputs = self.net(images)
plt.imshow(image, alpha=1)
plt.axis('off')
mask = np.zeros((image.size[1], image.size[0]))
for sub_output in outputs:
sub_output = sub_output.cpu().numpy()
b, c, h, w = np.shape(sub_output)
sub_output = np.transpose(np.reshape(sub_output, [b, 3, -1, h, w]), [0, 3, 4, 1, 2])[0]
score = np.max(sigmoid(sub_output[..., 4]), -1)
score = cv2.resize(score, (image.size[0], image.size[1]))
normed_score = (score * 255).astype('uint8')
mask = np.maximum(mask, normed_score)
plt.imshow(mask, alpha=0.5, interpolation='nearest', cmap="jet")
plt.axis('off')
plt.subplots_adjust(top=1, bottom=0, right=1, left=0, hspace=0, wspace=0)
plt.margins(0, 0)
plt.savefig(heatmap_save_path, dpi=200, bbox_inches='tight', pad_inches = -0.1)
print("Save to the " + heatmap_save_path)
plt.show()
def load_img(path, new_size=None):
"""
Load a single image from disk.
path: Image path
resample_spacing: spacing to resample img
"""
sitk_t1 = sitk.ReadImage(path)
# if we have a resample size:
if new_size:
sitk_t1 = resize_image(sitk_t1, new_size)
img = sitk.GetArrayFromImage(sitk_t1)
save_img(img, '/homedtic/gmarti/test.nii.gz')
return img
def get_FPS(self, image, test_interval):
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image, (self.input_shape[1],self.input_shape[0]), self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(np.transpose(preprocess_input(np.array(image_data, dtype='float32')), (2, 0, 1)), 0)
with torch.no_grad():
images = torch.from_numpy(image_data)
if self.cuda:
images = images.cuda()
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
outputs = self.net(images)
outputs = self.bbox_util.decode_box(outputs)
#---------------------------------------------------------#
# 将预测框进行堆叠，然后进行非极大抑制
#---------------------------------------------------------#
results = self.bbox_util.non_max_suppression(torch.cat(outputs, 1), self.num_classes, self.input_shape,
image_shape, self.letterbox_image, conf_thres=self.confidence, nms_thres=self.nms_iou)
t1 = time.time()
for _ in range(test_interval):
with torch.no_grad():
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
outputs = self.net(images)
outputs = self.bbox_util.decode_box(outputs)
#---------------------------------------------------------#
# 将预测框进行堆叠，然后进行非极大抑制
#---------------------------------------------------------#
results = self.bbox_util.non_max_suppression(torch.cat(outputs, 1), self.num_classes, self.input_shape,
image_shape, self.letterbox_image, conf_thres=self.confidence, nms_thres=self.nms_iou)
t2 = time.time()
tact_time = (t2 - t1) / test_interval
return tact_time
def representative_dataset_gen(CocoDataset, Config):
for i in range(50000):
image = CocoDataset.load_image(i)
image, window, scale, padding, crop = resize_image(
image,
min_dim=Config.IMAGE_MIN_DIM,
min_scale=Config.IMAGE_MIN_SCALE,
max_dim=Config.IMAGE_MAX_DIM,
mode=Config.IMAGE_RESIZE_MODE)
mean = np.array([0.485, 0.456, 0.406])
std = np.array([0.229, 0.224, 0.225])
mean = np.reshape(mean, [1, 1, 3])
std = np.reshape(std, [1, 1, 3])
img = (image / 255. - mean) / std
yield [img]
def eval(self):
# compute the metrics on the provided dataset with the provided networks
measures = []
metrics = {}
metrics_list = [
'Abs rel', 'Sq rel', 'RMSE', 'log RMSE', 's1', 's2', 's3'
]
MSELoss = nn.MSELoss()
print(
'Starting evaluation on datasets: ',
functools.reduce(lambda s1, s2: s1['path'] + ', ' + s2['path'],
self.dataset_paths))
for idx, (tensorImage, disparities, masks, imageNetTensor,
dataset_ids) in enumerate(tqdm(self.data_loader)):
tensorImage = tensorImage.to(device, non_blocking=True)
disparities = disparities.to(device, non_blocking=True)
masks = masks.to(device, non_blocking=True)
N = tensorImage.size()[2] * tensorImage.size()[3]
# pretrained networks from 3D KBE were trained with image normalized between 0 and 1
if self.eval_pretrained:
tensorImage = (tensorImage + 1) / 2
tensorResized = resize_image(tensorImage)
tensorDisparity = self.moduleDisparity(
tensorResized,
self.moduleSemantics(tensorResized)) # depth estimation
tensorDisparity = self.moduleRefine(
tensorImage, tensorDisparity) # increase resolution
tensorDisparity = F.threshold(tensorDisparity,
threshold=0.0,
value=0.0)
masks = masks.clamp(0, 1)
measures.append(
np.array(compute_metrics(tensorDisparity, disparities, masks)))
measures = np.array(measures).mean(axis=0)
for i, name in enumerate(metrics_list):
metrics[name] = measures[i]
return metrics
def prepare_image(self, image_id):
"""use config to processing coco image size and others,
augment: (deprecated. Use augmentation instead). If true, apply random
image augmentation. Currently, only horizontal flipping is offered.
augmentation: Optional. An imgaug (https://github.com/aleju/imgaug) augmentation.
For example, passing imgaug.augmenters.Fliplr(0.5) flips images
right/left 50% of the time.
Returns:
image: [height, width, 3]
image_meta: the original shape of the image and resizing and cropping.
class_ids: [instance_count] Integer class IDs
bbox: [instance_count, (y1, x1, y2, x2)]
mask: [height, width, instance_count]. The height and width are those
of the image.
gt_y: [instance_count]
gt_x: [instance_count]
vector_mask: [height, width, 2*class_num]. Set pixel relative center vector.
"""
# Load image and mask
image = self.load_image(image_id=image_id)
mask, class_ids = self.load_mask(image_id=image_id)
original_shape = image.shape
# print(original_shape)
# print(type(original_shape))
image, window, scale, padding, crop = cocoutils.resize_image(
image,
min_dim=self.config.IMAGE_MIN_DIM,
min_scale=self.config.IMAGE_MIN_SCALE,
max_dim=self.config.IMAGE_MAX_DIM,
mode=self.config.IMAGE_RESIZE_MODE)
mask = cocoutils.resize_mask(mask, scale, padding, 0, crop)
_idx = np.sum(mask, axis=(0, 1)) > 16
class_ids = class_ids[_idx]
if len(class_ids) != 0:
# print(class_ids)
# [y, x, num_instance]
mask = mask[:, :, _idx]
# print(np.amax(mask, axis=(0, 1)))
# Bounding boxes. Note that some boxes might be all zeros
# if the corresponding mask got cropped out.
# bbox: [num_instances, (y1, x1, y2, x2)]
bbox = cocoutils.extract_bboxes(mask)
gt_cy, gt_cx = cocoutils.gravity_center(mask)
return image, class_ids, bbox, mask, gt_cy, gt_cx
print("return nothing")
return None
def test_one_image(self, images, show=False):
self.is_training = False
image, window, scale, padding, crop = resize_image(
images,
min_dim=self.image_size,
min_scale=0,
max_dim=self.image_size,
mode="square")
mean = np.array([0.485, 0.456, 0.406])
std = np.array([0.229, 0.224, 0.225])
mean = np.reshape(mean, [1, 1, 3])
std = np.reshape(std, [1, 1, 3])
image = (image / 255. - mean) / std
image = tf.convert_to_tensor(np.expand_dims(image, axis=0))
# self.CenterNetModel.save('./SAVE')
# tf.saved_model.save(self.CenterNetModel, "./SAVE")
# tf.keras.experimental.export_saved_model(self.CenterNetModel, "./SAVE")
# self.CenterNetModel.save('my_model.h5')
#
# converter = tf.lite.TFLiteConverter.from_keras_model('my_model.h5')
# converter.optimizations = [tf.lite.Optimize.DEFAULT]
# converter.target_spec.supported_ops = [tf.lite.OpsSet.TFLITE_BUILTINS]
# tflite_model = converter.convert()
# open("converted_model.tflite", "wb").write(tflite_model)
# float16 quantilize
# converter = tf.lite.TFLiteConverter.from_keras_model(self.CenterNetModel)
# converter.target_spec.supported_ops = [tf.lite.OpsSet.TFLITE_BUILTINS, tf.lite.OpsSet.SELECT_TF_OPS]
# converter.optimizations = [tf.lite.Optimize.DEFAULT]
# converter.target_spec.supported_types = [tf.float16]
# tflite_quant_model = converter.convert()
# open("converted_model.tflite", "wb").write(tflite_quant_model)
pred = self.CenterNetModel.predict(
image,
batch_size=1,
verbose=0,
steps=None,
callbacks=None,
max_queue_size=10,
workers=1,
use_multiprocessing=False
)
return pred
def draw_normalized_box(self, box_coordinates, image_key=None, color='r'):
if len(box_coordinates.shape) == 1:
box_coordinates = np.expand_dims(box_coordinates, 0)
if image_key == None:
image_path = self.random_instance.choice(self.image_paths)
else:
image_path = self.image_prefix + image_key
image_array = read_image(image_path)
image_array = resize_image(image_array, self.image_size)
figure, axis = plt.subplots(1)
axis.imshow(image_array)
original_coordinates = self.denormalize_box(box_coordinates)
x_min = original_coordinates[:, 0]
y_min = original_coordinates[:, 1]
x_max = original_coordinates[:, 2]
y_max = original_coordinates[:, 3]
width = x_max - x_min
height = y_max - y_min
if box_coordinates.shape[1] > 4:
classes = box_coordinates[:, 4:]
classes_flag = True
else:
classes_flag = False
num_boxes = len(box_coordinates)
for box_arg in range(num_boxes):
x_min_box = x_min[box_arg]
y_min_box = y_min[box_arg]
box_width = width[box_arg]
box_height = height[box_arg]
x_text = x_min_box + (1 * box_width )
y_text = y_min_box #+ (1 * box_height )
rectangle = plt.Rectangle((x_min_box, y_min_box),
box_width, box_height,
linewidth=1, edgecolor=color, facecolor='none')
axis.add_patch(rectangle)
if self.classes_decoder != None and classes_flag:
box_class = classes[box_arg]
class_name = self.classes_decoder[np.argmax(box_class)]
axis.text(x_text, y_text, class_name, style='italic',
bbox={'facecolor':'red', 'alpha':0.5, 'pad':10})
plt.show()
def detect_image(self, image_id, image, results, clsid2catid):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data = resize_image(image,
(self.input_shape[1], self.input_shape[0]),
self.letterbox_image)
#---------------------------------------------------------#
# 添加上batch_size维度，并进行归一化
#---------------------------------------------------------#
image_data = np.expand_dims(
preprocess_input(np.array(image_data, dtype='float32')), 0)
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
input_image_shape = np.expand_dims(
np.array([image.size[1], image.size[0]], dtype='float32'), 0)
out_boxes, out_scores, out_classes = self.yolo_model.predict(
[image_data, input_image_shape])
for i, c in enumerate(out_classes):
result = {}
top, left, bottom, right = out_boxes[i]
result["image_id"] = int(image_id)
result["category_id"] = clsid2catid[c]
result["bbox"] = [
float(left),
float(top),
float(right - left),
float(bottom - top)
]
result["score"] = float(out_scores[i])
results.append(result)
return results
def get_miou_png(self, image):
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
orininal_h = np.array(image).shape[0]
orininal_w = np.array(image).shape[1]
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
#---------------------------------------------------------#
image_data, nw, nh = resize_image(
image, (self.input_shape[1], self.input_shape[0]))
#---------------------------------------------------------#
# 归一化+添加上batch_size维度
#---------------------------------------------------------#
image_data = np.expand_dims(
preprocess_input(np.array(image_data, np.float32)), 0)
#--------------------------------------#
# 图片传入网络进行预测
#--------------------------------------#
pr = self.model.predict(image_data)[0]
#--------------------------------------#
# 将灰条部分截取掉
#--------------------------------------#
pr = pr[int((self.input_shape[0] - nh) // 2) : int((self.input_shape[0] - nh) // 2 + nh), \
int((self.input_shape[1] - nw) // 2) : int((self.input_shape[1] - nw) // 2 + nw)]
#--------------------------------------#
# 进行图片的resize
#--------------------------------------#
pr = cv2.resize(pr, (orininal_w, orininal_h),
interpolation=cv2.INTER_LINEAR)
#---------------------------------------------------#
# 取出每一个像素点的种类
#---------------------------------------------------#
pr = pr.argmax(axis=-1)
image = Image.fromarray(np.uint8(pr))
return image
def get_map_out(self, image):
image_shape = np.array(np.shape(image)[0:2])
#---------------------------------------------------------#
# 在这里将图像转换成RGB图像，防止灰度图在预测时报错。
# 代码仅仅支持RGB图像的预测，所有其它类型的图像都会转化成RGB
#---------------------------------------------------------#
image = cvtColor(image)
#---------------------------------------------------------#
# 给图像增加灰条，实现不失真的resize
# 也可以直接resize进行识别
#---------------------------------------------------------#
image_data, image_metas, windows = resize_image([np.array(image)],
self.config)
#---------------------------------------------------------#
# 根据当前输入图像的大小，生成先验框
#---------------------------------------------------------#
anchors = np.expand_dims(get_anchors(self.config, image_data[0].shape),
0)
#---------------------------------------------------------#
# 将图像输入网络当中进行预测！
#---------------------------------------------------------#
detections, _, _, mrcnn_mask, _, _, _ = self.model.predict(
[image_data, image_metas, anchors], verbose=0)
#---------------------------------------------------#
# 上面获得的预测结果是相对于padding后的图片的
# 我们需要将预测结果转换到原图上
#---------------------------------------------------#
box_thre, class_thre, class_ids, masks_arg, masks_sigmoid = postprocess(
detections[0], mrcnn_mask[0], image_shape, image_data[0].shape,
windows[0])
outboxes = None
if box_thre is not None:
outboxes = np.zeros_like(box_thre)
outboxes[:, [0, 2]] = box_thre[:, [1, 3]]
outboxes[:, [1, 3]] = box_thre[:, [0, 2]]
return outboxes, class_thre, class_ids, masks_arg, masks_sigmoid
def test_one_image(self, images):
self.is_training = False
image, window, scale, padding, crop = resize_image(
images,
min_dim=self.image_size,
min_scale=0,
max_dim=self.image_size,
mode="square")
mean = np.array([0.485, 0.456, 0.406])
std = np.array([0.229, 0.224, 0.225])
mean = np.reshape(mean, [1, 1, 3])
std = np.reshape(std, [1, 1, 3])
image = (image / 255. - mean) / std
image = tf.convert_to_tensor(np.expand_dims(image, axis=0))
# converter = tf.lite.TFLiteConverter.from_keras_model(self.CenterNetModel)
#
# # converter.optimizations = [tf.lite.Optimize.DEFAULT]
# converter.optimizations = [tf.lite.Optimize.OPTIMIZE_FOR_SIZE]
# converter.target_spec.supported_ops = [tf.lite.OpsSet.TFLITE_BUILTINS]
# # converter.target_spec.supported_ops = [tf.lite.OpsSet.TFLITE_BUILTINS,
# # tf.lite.OpsSet.SELECT_TF_OPS]
#
# # converter.representative_dataset = representative_dataset_gen
# tf_lite_model = converter.convert()
# open("converted_model.tflite", "wb").write(tf_lite_model)
pred = self.CenterNetModel.predict(
image,
batch_size=1,
verbose=0,
steps=None,
callbacks=None,
max_queue_size=10,
workers=1,
use_multiprocessing=False
)
return pred
