def __init__(self, DEBUG, list_of_demonstrations, featfile, trialname):
		# self.list_of_demonstrations = parser.generate_list_of_videos(constants.PATH_TO_DATA + constants.CONFIG_FILE)
	
		self.list_of_demonstrations = list_of_demonstrations
		self.data_X = {}
		self.data_X_size = {}
		self.data_N = {}

		self.file = None
		self.featfile = featfile
		self.metrics_picklefile = None

		self.change_pts = None
		self.change_pts_Z = None
		self.change_pts_W = None

		self.list_of_cp = []
		self.map_cp2frm = {}
		self.map_cp2demonstrations = {}
		self.map_cp_level1 = {}
		self.map_cp_level2 = {}
		self.map_level1_cp = {}
		self.map_level2_cp = {}
		self.map_cp2milestones = {}
		self.map_cp2surgemes = {}
		self.map_cp2surgemetransitions = {}
		self.l2_cluster_matrices = {}
		self.map_frm2surgeme = parser.get_all_frame2surgeme_maps(self.list_of_demonstrations)
		self.trial = utils.hashcode() + trialname
		# self.trial = trialname
		self.cp_surgemes = []
		self.pruned_L1_clusters = []
		self.pruned_L2_clusters = []

		self.silhouette_scores = {}
		self.dunn_scores_1 = {}
		self.dunn_scores_2 = {}
		self.dunn_scores_3 = {}

		self.level2_dunn_1 = []
		self.level2_dunn_2 = []
		self.level2_dunn_3 = []
		self.level2_silhoutte = []

		self.label_based_scores_1 = {}
		self.label_based_scores_2 = {}

		self.gmm_objects = {}

		self.sr = 10
Example #2
0
	def __init__(self, DEBUG, list_of_demonstrations, featfile, trialname):
		# self.list_of_demonstrations = parser.generate_list_of_videos(constants.PATH_TO_DATA + constants.CONFIG_FILE)
	
		self.list_of_demonstrations = list_of_demonstrations
		self.data_X = {}
		self.data_X_size = {}
		self.data_N = {}

		self.file = None
		self.featfile = featfile
		self.metrics_picklefile = None

		self.change_pts = None
		self.change_pts_Z = None
		self.change_pts_W = None

		self.list_of_cp = []
		self.map_cp2frm = {}
		self.map_cp2demonstrations = {}
		self.map_cp_level1 = {}
		self.map_cp_level2 = {}
		self.map_level1_cp = {}
		self.map_level2_cp = {}
		self.map_cp2milestones = {}
		self.map_cp2surgemes = {}
		self.map_cp2surgemetransitions = {}
		self.l2_cluster_matrices = {}
		self.map_frm2surgeme = utils.get_all_frame2surgeme_maps(self.list_of_demonstrations)
		self.trial = utils.hashcode() + trialname
		# self.trial = trialname
		self.cp_surgemes = []
		self.pruned_L1_clusters = []
		self.pruned_L2_clusters = []

		self.silhouette_scores = {}
		self.dunn_scores_1 = {}
		self.dunn_scores_2 = {}
		self.dunn_scores_3 = {}

		self.level2_dunn_1 = []
		self.level2_dunn_2 = []
		self.level2_dunn_3 = []
		self.level2_silhoutte = []

		self.label_based_scores_1 = {}
		self.label_based_scores_2 = {}

		self.gmm_objects = {}

		self.sr = 10
Example #3
0
from save.instituicoes_pt import *

serialize_rdf_unidades = {
    "classType":
    Unidade,
    "collection": [
        {  ## ufrn
            "toSave":
            False,
            "mapper": {
                "nome":
                "nome_unidade",
                "code":
                "id_unidade",
                "id":
                lambda d: hashcode("ufrn", "centro", d["id_unidade"]),
                "university":
                lambda d: UFRN,
                "sameas":
                lambda d:
                "https://sigaa.ufrn.br/sigaa/public/departamento/portal.jsf?id="
                + str(d["id_unidade"]),
            },
            "data":
            lambda: list(
                filter(
                    lambda d: d["tipo_unidade_organizacional"].find("CENTRO") >
                    -1,
                    dados_ckan(
                        "http://dados.ufrn.br/api/action/datastore_search?resource_id=3f2e4e32-ef1a-4396-8037-cbc22a89d97f"
                    ))),
Example #4
0
	def __init__(self, DEBUG, list_of_demonstrations, featfile, trialname):
		self.list_of_demonstrations = list_of_demonstrations
		self.data_X = {}
		self.data_W = {}
		self.data_Z = {}
		self.data_X_size = {}
		self.data_N = {}

		self.file = None
		self.featfile = featfile
		self.metrics_picklefile = None

		self.change_pts = None
		self.change_pts_Z = None
		self.change_pts_W = None

		self.list_of_cp = []
		self.map_cp2frm = {}
		self.map_cp2demonstrations = {}
		self.map_cp2level1 = {}
		self.map_level12cp = {}
		self.map_cp2milestones = {}
		self.map_cp2surgemes = {}
		self.map_cp2surgemetransitions = {}
		self.l2_cluster_matrices = {}
		self.map_frm2surgeme = utils.get_all_frame2surgeme_maps(self.list_of_demonstrations)
		self.trial = utils.hashcode() + trialname
		self.cp_surgemes = []
		self.pruned_L1_clusters = []
		self.pruned_L2_clusters = []

		self.silhouette_scores_global = {}
		self.silhouette_scores_weighted = {}
		self.dunn_scores_1 = {}
		self.dunn_scores_2 = {}
		self.dunn_scores_3 = {}

		self.level2_dunn_1 = []
		self.level2_dunn_2 = []
		self.level2_dunn_3 = []
		self.level2_silhoutte_global = []
		self.level2_silhoutte_weighted = []

		self.label_based_scores_1 = {}
		self.label_based_scores_2 = {}

		self.sr = constants.SR
		self.representativeness = constants.PRUNING_FACTOR_ZW

		# Components for Mixture model at each level
		self.n_components_cp = constants.N_COMPONENTS_CP
		self.n_components_L1 = constants.N_COMPONENTS_L1
		self.n_components_L2 = constants.N_COMPONENTS_L2

		self.temporal_window = constants.TEMPORAL_WINDOW_ZW

		self.fit_GMM = False

		self.fit_DPGMM = True

		assert self.fit_DPGMM or self.fit_GMM == True
Example #5
0
from utils import dados_ckan, dados_ufma, hashcode, dados_iffar

from save.instituicoes_pt import *

serialize_rdf_subunidades = {
    "classType":
    Subunidade,
    "collection": [
        {  ## ufrn
            "toSave":
            False,
            "mapper": {
                "nome":
                "nome_unidade",
                "id":
                lambda d: hashcode("ufrn", "departamento", d["id_unidade"]),
                "code":
                "id_unidade",
                "university":
                lambda d: UFRN,
                "unidade":
                lambda d: "https://www.dbacademic.tech/resource/" + hashcode(
                    "ufrn", "centro", d["id_unidade_responsavel"]),
                "sameas":
                lambda d:
                "https://sigaa.ufrn.br/sigaa/public/departamento/portal.jsf?id="
                + str(d["id_unidade"]),
            },
            "data":
            lambda: list(
                filter(
Example #6
0
    def __init__(self, DEBUG, list_of_demonstrations, featfile, trialname):
        self.list_of_demonstrations = list_of_demonstrations
        self.data_X = {}
        self.data_W = {}
        self.data_Z = {}
        self.data_X_size = {}
        self.data_N = {}

        self.file = None
        self.featfile = featfile
        self.metrics_picklefile = None

        self.change_pts = None
        self.change_pts_Z = None
        self.change_pts_W = None

        self.list_of_cp = []
        self.map_cp2frm = {}
        self.map_cp2demonstrations = {}
        self.map_cp2level1 = {}
        self.map_level12cp = {}
        self.map_cp2milestones = {}
        self.map_cp2surgemes = {}
        self.map_cp2surgemetransitions = {}
        self.l2_cluster_matrices = {}
        self.map_frm2surgeme = utils.get_all_frame2surgeme_maps(
            self.list_of_demonstrations)
        self.trial = utils.hashcode() + trialname
        self.cp_surgemes = []
        self.pruned_L1_clusters = []
        self.pruned_L2_clusters = []

        self.silhouette_scores_global = {}
        self.silhouette_scores_weighted = {}
        self.dunn_scores_1 = {}
        self.dunn_scores_2 = {}
        self.dunn_scores_3 = {}

        self.level2_dunn_1 = []
        self.level2_dunn_2 = []
        self.level2_dunn_3 = []
        self.level2_silhoutte_global = []
        self.level2_silhoutte_weighted = []

        self.label_based_scores_1 = {}
        self.label_based_scores_2 = {}

        self.sr = constants.SR
        self.representativeness = constants.PRUNING_FACTOR_ZW

        # Components for Mixture model at each level
        self.n_components_cp = constants.N_COMPONENTS_CP
        self.n_components_L1 = constants.N_COMPONENTS_L1
        self.n_components_L2 = constants.N_COMPONENTS_L2

        self.temporal_window = constants.TEMPORAL_WINDOW_ZW

        self.fit_GMM = False

        self.fit_DPGMM = True

        assert self.fit_DPGMM or self.fit_GMM == True
	def __init__(self, DEBUG, list_of_demonstrations, fname, log, vision_mode = False, feat_fname = None):
		self.list_of_demonstrations = list_of_demonstrations

		if vision_mode and feat_fname is None:
			print "[Error] Please provide file with visual features"
			sys.exit()

		self.vision_mode = vision_mode
		self.feat_fname = feat_fname
		self.data_X = {}
		self.X_dimension = 0
		self.data_X_size = 0
		self.data_N = {}
		self.log = log

		self.file = None
		self.metrics_picklefile = constants.PATH_TO_CLUSTERING_RESULTS + fname + ".p"

		self.changepoints = None

		self.list_of_cp = []
		self.map_cp2frm = {}
		self.map_cp2demonstrations = {}
		self.map_cp2cluster = {}
		self.map_level1_cp = {}
		self.map_cp2milestones = {}
		self.map_cp2surgemes = {}
		self.map_cp2surgemetransitions = {}
		self.map_frm2surgeme = utils.get_all_frame2surgeme_maps(self.list_of_demonstrations)
		self.trial = utils.hashcode() + fname

		# self.trial = fname
		self.cp_surgemes = []
		self.pruned_L1_clusters = []

		self.silhouette_score_global = None
		self.silhouette_score_weighted = None

		self.dunn_scores_1 = {}
		self.dunn_scores_2 = {}
		self.dunn_scores_3 = {}

		self.label_based_scores_1 = {}

		self.sr = constants.SR

		# Components for Mixture model at each level
		if self.vision_mode:
			self.n_components_cp = constants.N_COMPONENTS_CP_Z
			self.n_components_L1 = constants.N_COMPONENTS_L1_Z
			self.temporal_window = constants.TEMPORAL_WINDOW_Z
			self.representativeness = constants.PRUNING_FACTOR_Z
			self.ALPHA_CP = constants.ALPHA_Z_CP
			if (constants.TASK_NAME in ["000", "010", "011", "100"]):
				self.ALPHA_CP = constants.ALPHA_W_CP
		else:
			self.n_components_cp = constants.N_COMPONENTS_CP_W
			self.n_components_L1 = constants.N_COMPONENTS_L1_W
			self.temporal_window = constants.TEMPORAL_WINDOW_W
			self.representativeness = constants.PRUNING_FACTOR_W
			self.ALPHA_CP = constants.ALPHA_W_CP

		self.ALPHA_L1 = 0.4

		self.fit_GMM = False

		self.fit_DPGMM = True

		assert self.fit_DPGMM or self.fit_GMM == True
	def __init__(self, DEBUG, list_of_demonstrations, fname, log, vision_mode = False, feat_fname = None):
		self.list_of_demonstrations = list_of_demonstrations

		if vision_mode and feat_fname is None:
			print "[Error] Please provide file with visual features"
			sys.exit()

		self.vision_mode = vision_mode
		self.feat_fname = feat_fname
		self.data_X = {}
		self.X_dimension = 0
		self.data_X_size = 0
		self.data_N = {}
		self.log = log

		self.file = None
		self.metrics_picklefile = constants.PATH_TO_CLUSTERING_RESULTS + fname + ".p"

		self.changepoints = None

		self.list_of_cp = []
		self.map_cp2frm = {}
		self.map_cp2demonstrations = {}
		self.map_cp2cluster = {}
		self.map_level1_cp = {}
		self.map_cp2milestones = {}
		self.map_cp2surgemes = {}
		self.map_cp2surgemetransitions = {}
		self.map_frm2surgeme = parser.get_all_frame2surgeme_maps(self.list_of_demonstrations)
		self.trial = utils.hashcode() + fname
		# self.trial = fname
		self.cp_surgemes = []
		self.pruned_L1_clusters = []

		self.silhouette_score_global = None
		self.silhouette_score_weighted = None

		self.dunn_scores_1 = {}
		self.dunn_scores_2 = {}
		self.dunn_scores_3 = {}

		self.label_based_scores_1 = {}

		self.sr = constants.SR

		# Components for Mixture model at each level
		if self.vision_mode:
			self.n_components_cp = constants.N_COMPONENTS_CP_Z
			self.n_components_L1 = constants.N_COMPONENTS_L1_Z
			self.temporal_window = constants.TEMPORAL_WINDOW_Z
			self.representativeness = constants.PRUNING_FACTOR_Z
			self.ALPHA_CP = constants.ALPHA_Z_CP
			if (constants.TASK_NAME in ["000", "010", "011", "100"]):
				self.ALPHA_CP = constants.ALPHA_W_CP
		else:
			self.n_components_cp = constants.N_COMPONENTS_CP_W
			self.n_components_L1 = constants.N_COMPONENTS_L1_W
			self.temporal_window = constants.TEMPORAL_WINDOW_W
			self.representativeness = constants.PRUNING_FACTOR_W
			self.ALPHA_CP = constants.ALPHA_W_CP

		self.ALPHA_L1 = 0.4

		self.fit_GMM = False

		self.fit_DPGMM = True

		assert self.fit_DPGMM or self.fit_GMM == True
Example #9
0
from utils import dados_ckan, dados_ufma, hashcode, removeNonUTF8, dados_csv

from save.instituicoes_pt import *

serialize_rdf_monografia = {
    "classType":
    Monografia,
    "collection": [
        {  ## ufrn
            "toSave":
            False,
            "mapper": {
                "titulo": lambda d: removeNonUTF8(d["titulo"]),
                "university": lambda d: UFRN,
                "id": lambda d: hashcode("ufrn", "monografias", str(d["_id"])),
                "autor": "nome_autor"
            },
            "data":
            lambda: dados_ckan(
                "http://dados.ufrn.br/api/action/datastore_search?resource_id=7c01071b-81a4-4793-9a63-acfcd8a1aa83"
            ),
            "rdf_path":
            "rdf/monografias_ufrn.rdf"
        },
        {  ## ufma
            "toSave":
            False,
            "mapper": {
                "titulo":
                lambda d: (d["titulo"]),