def build_model(x,
y,
num_classes=2,
num_estimator=None, #we missuse num_estimator for the number of convolutions
num_filter=16,
is_training=True,
reuse=None
):
"""
handle model. calculate the loss and the prediction for some input x and the corresponding labels y
input: x shape=[None,bands,frames,num_channels], y shape=[None]
output: loss shape=(1), prediction shape=[None]
CAUTION! controller.py uses a function whith this name and arguments.
"""
#preprocess
y = slim.one_hot_encoding(y, num_classes)
#model
logits = classify(x, num_classes=num_classes, num_filter=num_filter, route=num_estimator, is_training=is_training, reuse=reuse)
#results
loss = tf.reduce_mean(softmax_cross_entropy(logits = logits, onehot_labels = y))
predictions = tf.argmax(slim.softmax(logits),1)
return loss, predictions
def build_model(x,
y,
num_classes=2,
is_training=True,
num_estimator=None,
num_filter=None,
reuse=None):
"""
handle model. calculate the loss and the prediction for some input x and the corresponding labels y
input: x shape=[None,bands,frames,num_channels], y shape=[None]
output: loss shape=(1), prediction shape=[None]
CAUTION! controller.py uses a function whith this name and arguments.
"""
#preprocess
y = slim.one_hot_encoding(y, num_classes)
print('input: ', x.get_shape())
#model
logits = RNN_deepcough(x,
num_outputs=num_classes,
reuse=reuse,
is_training=is_training)
#results
loss = tf.reduce_mean(softmax_cross_entropy(logits=logits,
onehot_labels=y))
predictions = tf.argmax(slim.softmax(logits), 1)
return loss, predictions
def build_model(x,
y,
num_classes=2,
num_estimator=None, # we missuse num_estimator for the number of convolutions
num_filter=16,
is_training=True,
reuse=None,
include_logits=False,
loss_algo=None,
beta=0.6
):
"""
handle model. calculate the loss and the prediction for some input x and the corresponding labels y
input: x shape=[None,bands,frames,num_channels], y shape=[None]
output: loss shape=(1), prediction shape=[None]
CAUTION! controller.py uses a function whith this name and arguments.
"""
# preprocess)
y = slim.one_hot_encoding(y, num_classes)
# model
logits = classify(x, num_classes=num_classes, num_filter=num_filter, route=num_estimator, is_training=is_training,
reuse=reuse)
print("input y", str(y.get_shape()))
print("logits", str(logits.get_shape()))
# results
if loss_algo is None or loss_algo == "cross_entropy":
loss = softmax_cross_entropy(logits=logits, onehot_labels=y)
loss = tf.reduce_mean(loss)
elif loss_algo == "weighted":
loss = weighted_cross_entropy(y, logits, beta)
loss = tf.reduce_mean(loss)
elif loss_algo == "balanced":
loss = balanced_cross_entropy(y, logits, beta)
loss = tf.reduce_mean(loss)
elif loss_algo == "focal":
loss = focal_loss(y, logits)
loss = tf.reduce_mean(loss)
elif loss_algo == "dice":
loss = dice_loss(y, logits)
elif loss_algo == "tversky":
loss = tversky_loss(y, logits, beta)
else:
raise Exception("unknown loss %s" % loss_algo)
predictions = tf.argmax(slim.softmax(logits), 1)
if include_logits:
return loss, predictions, logits
return loss, predictions
def main(main_params, optimization_type="minibatch_sgd"):
### set the random seed ###
np.random.seed(int(main_params['random_seed']))
### data processing ###
Xtrain, Ytrain, Xval, Yval, _, _ = data_loader_mnist(
dataset=main_params['input_file'])
N_train, d = Xtrain.shape
N_val, _ = Xval.shape
index = np.arange(10)
unique, counts = np.unique(Ytrain, return_counts=True)
counts = dict(zip(unique, counts)).values()
trainSet = DataSplit(Xtrain, Ytrain)
valSet = DataSplit(Xval, Yval)
### building/defining MLP ###
"""
In this script, we are going to build a MLP for a 10-class classification problem on MNIST.
The network structure is input --> linear --> relu --> dropout --> linear --> softmax_cross_entropy loss
the hidden_layer size (num_L1) is 1000
the output_layer size (num_L2) is 10
"""
model = dict()
num_L1 = 1000
num_L2 = 10
# experimental setup
num_epoch = int(main_params['num_epoch'])
minibatch_size = int(main_params['minibatch_size'])
# optimization setting: _alpha for momentum, _lambda for weight decay
_learning_rate = float(main_params['learning_rate'])
_step = 10
_alpha = float(main_params['alpha'])
_lambda = float(main_params['lambda'])
_dropout_rate = float(main_params['dropout_rate'])
_activation = main_params['activation']
if _activation == 'relu':
act = relu
else:
act = tanh
# create objects (modules) from the module classes
model['L1'] = linear_layer(input_D=d, output_D=num_L1)
model['nonlinear1'] = act()
model['drop1'] = dropout(r=_dropout_rate)
model['L2'] = linear_layer(input_D=num_L1, output_D=num_L2)
model['loss'] = softmax_cross_entropy()
# Momentum
if _alpha > 0.0:
momentum = add_momentum(model)
else:
momentum = None
train_acc_record = []
val_acc_record = []
train_loss_record = []
val_loss_record = []
### run training and validation ###
for t in range(num_epoch):
print('At epoch ' + str(t + 1))
if (t % _step == 0) and (t != 0):
_learning_rate = _learning_rate * 0.1
idx_order = np.random.permutation(N_train)
train_acc = 0.0
train_loss = 0.0
train_count = 0
val_acc = 0.0
val_count = 0
val_loss = 0.0
for i in range(int(np.floor(N_train / minibatch_size))):
# get a mini-batch of data
x, y = trainSet.get_example(idx_order[i * minibatch_size:(i + 1) *
minibatch_size])
### forward ###
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=True)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
### backward ###
grad_a2 = model['loss'].backward(a2, y)
######################################################################################
# TODO: Call the backward methods of every layer in the model in reverse order
# We have given the first and last backward calls
# Do not modify them.
######################################################################################
grad_d1 = model['L2'].backward(d1, grad_a2)
grad_h1 = model['drop1'].backward(h1, grad_d1)
grad_a1 = model['nonlinear1'].backward(a1, grad_h1)
#raise NotImplementedError("Not Implemented BACKWARD PASS in main()")
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
grad_x = model['L1'].backward(x, grad_a1)
### gradient_update ###
model = miniBatchGradientDescent(model, momentum, _lambda, _alpha,
_learning_rate)
### Computing training accuracy and obj ###
for i in range(int(np.floor(N_train / minibatch_size))):
x, y = trainSet.get_example(
np.arange(i * minibatch_size, (i + 1) * minibatch_size))
### forward ###
######################################################################################
# TODO: Call the forward methods of every layer in the model in order
# Check above forward code
# Make sure to keep train as False
######################################################################################
#raise NotImplementedError("Not Implemented COMPUTING TRAINING ACCURACY in main()")
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
loss = model['loss'].forward(a2, y)
train_loss += loss
train_acc += np.sum(predict_label(a2) == y)
train_count += len(y)
train_loss = train_loss
train_acc = train_acc / train_count
train_acc_record.append(train_acc)
train_loss_record.append(train_loss)
print('Training loss at epoch ' + str(t + 1) + ' is ' +
str(train_loss))
print('Training accuracy at epoch ' + str(t + 1) + ' is ' +
str(train_acc))
### Computing validation accuracy ###
for i in range(int(np.floor(N_val / minibatch_size))):
x, y = valSet.get_example(
np.arange(i * minibatch_size, (i + 1) * minibatch_size))
### forward ###
######################################################################################
# TODO: Call the forward methods of every layer in the model in order
# Check above forward code
# Make sure to keep train as False
######################################################################################
#raise NotImplementedError("Not Implemented COMPUTING VALIDATION ACCURACY in main()")
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
loss = model['loss'].forward(a2, y)
val_loss += loss
val_acc += np.sum(predict_label(a2) == y)
val_count += len(y)
val_loss_record.append(val_loss)
val_acc = val_acc / val_count
val_acc_record.append(val_acc)
print('Validation accuracy at epoch ' + str(t + 1) + ' is ' +
str(val_acc))
# save file
json.dump(
{
'train': train_acc_record,
'val': val_acc_record
},
open(
'MLP_lr' + str(main_params['learning_rate']) + '_m' +
str(main_params['alpha']) + '_w' + str(main_params['lambda']) +
'_d' + str(main_params['dropout_rate']) + '_a' +
str(main_params['activation']) + '.json', 'w'))
print('Finish running!')
return train_loss_record, val_loss_record
def loss_fkt(logits, y):
return tf.reduce_mean(
softmax_cross_entropy(logits=logits,
onehot_labels=y,
label_smoothing=0.05))
def main(main_params, optimization_type="minibatch_sgd"):
# data processing
data = pd.read_csv("dataset/london_merged.csv")
data.drop(['timestamp'], inplace=True, axis=1)
bins = [-1, 1000, 2000, 3000, 4000, 100000]
dpy = data['cnt'].to_numpy()
r = pd.cut(dpy, bins)
data_y = r.codes
data.drop(['cnt'], inplace=True, axis=1)
# Normalization
data = (data - data.min()) / (data.max() - data.min())
data = data.to_numpy()
x_train, x_val, y_train, y_val = train_test_split(data, data_y, test_size=0.33,
random_state=int(main_params['random_seed']))
N_train, d = x_train.shape
N_val, _ = x_val.shape
trainSet = DataSplit(x_train, y_train)
valSet = DataSplit(x_val, y_val)
# building/defining model
# experimental setup
num_epoch = int(main_params['num_epoch'])
minibatch_size = int(main_params['minibatch_size'])
# optimization setting: _alpha for momentum, _lambda for weight decay
_learning_rate = float(main_params['learning_rate'])
_step = 10
_alpha = float(main_params['alpha'])
_lambda = float(main_params['lambda'])
_dropout_rate = float(main_params['dropout_rate'])
_activation = main_params['activation']
if _activation == 'relu':
act = relu
else:
act = tanh
# The network structure is input --> linear --> relu --> dropout --> linear --> softmax_cross_entropy loss
# num_L1:the hidden_layer1 size
# num_L2:the hidden_layer2 size
# num_L3:the output_layer size
model = dict()
num_L1 = 100
num_L2 = 50
num_L3 = 5
# create objects (modules) from the module classes
model['L1'] = linear_layer(input_D=d, output_D=num_L1)
model['nonlinear1'] = act()
model['drop1'] = dropout(r=_dropout_rate)
model['L2'] = linear_layer(input_D=num_L1, output_D=num_L2)
model['nonlinear2'] = act()
model['L3'] = linear_layer(input_D=num_L2, output_D=num_L3)
model['loss'] = softmax_cross_entropy()
# Momentum
if _alpha > 0.0:
momentum = add_momentum(model)
else:
momentum = None
train_acc_record = []
val_acc_record = []
train_loss_record = []
val_loss_record = []
# training & validation
for t in range(num_epoch):
if (t % _step == 0) and (t != 0):
_learning_rate = _learning_rate * 0.1
idx_order = np.random.permutation(N_train)
train_acc = 0.0
train_loss = 0.0
train_count = 0
val_acc = 0.0
val_count = 0
val_loss = 0.0
for i in range(int(np.floor(N_train / minibatch_size))):
# get a mini-batch of data
x, y = trainSet.get_example(idx_order[i * minibatch_size: (i + 1) * minibatch_size])
# forward
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=True)
a2 = model['L2'].forward(d1)
h2 = model['nonlinear2'].forward(a2)
a3 = model['L3'].forward(h2)
loss = model['loss'].forward(a3, y)
# backward
grad_a3 = model['loss'].backward(a3, y)
grad_h2 = model['L3'].backward(h2, grad_a3)
grad_a2 = model['nonlinear2'].backward(a2, grad_h2)
grad_d1 = model['L2'].backward(d1, grad_a2)
grad_h1 = model['drop1'].backward(h1, grad_d1)
grad_a1 = model['nonlinear1'].backward(a1, grad_h1)
grad_x = model['L1'].backward(x, grad_a1)
# update gradient
model = miniBatchGradientDescent(model, momentum, _lambda, _alpha, _learning_rate)
# training accuracy
for i in range(int(np.floor(N_train / minibatch_size))):
x, y = trainSet.get_example(np.arange(i * minibatch_size, (i + 1) * minibatch_size))
# forward
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
h2 = model['nonlinear2'].forward(a2)
a3 = model['L3'].forward(h2)
loss = model['loss'].forward(a3, y)
train_loss += loss
train_acc += np.sum(predict_label(a3) == y)
train_count += len(y)
train_loss = train_loss
train_acc = train_acc / train_count
train_acc_record.append(train_acc)
train_loss_record.append(train_loss)
# validation accuracy
for i in range(int(np.floor(N_val / minibatch_size))):
x, y = valSet.get_example(np.arange(i * minibatch_size, (i + 1) * minibatch_size))
# forward
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
h2 = model['nonlinear2'].forward(a2)
a3 = model['L3'].forward(h2)
loss = model['loss'].forward(a3, y)
val_loss += loss
val_acc += np.sum(predict_label(a3) == y)
val_count += len(y)
val_loss_record.append(val_loss)
val_acc = val_acc / val_count
val_acc_record.append(val_acc)
print('At epoch ' + str(t + 1))
print('Training loss at epoch ' + str(t + 1) + ' is ' + str(train_loss))
print('Training accuracy at epoch ' + str(t + 1) + ' is ' + str(train_acc))
print('Validation accuracy at epoch ' + str(t + 1) + ' is ' + str(val_acc))
index = [int(i+1) for i in range(num_epoch)]
plt.figure()
plt.grid()
plt.plot(index, train_acc_record, color='b', label='train_acc')
plt.plot(index, val_acc_record, color='darkorange', label='valadation_acc')
plt.xlabel('training epoch')
plt.ylabel('accuracy')
plt.legend()
plt.show()
return train_acc_record, val_acc_record
def main(main_params, optimization_type="minibatch_sgd"):
### set the random seed ###
np.random.seed(int(main_params['random_seed']))
### data processing ###
Xtrain, Ytrain, Xval, Yval , _, _ = data_loader_mnist(dataset = main_params['input_file'])
N_train, d = Xtrain.shape
N_val, _ = Xval.shape
index = np.arange(10)
unique, counts = np.unique(Ytrain, return_counts=True)
counts = dict(zip(unique, counts)).values()
trainSet = DataSplit(Xtrain, Ytrain)
valSet = DataSplit(Xval, Yval)
model = dict()
num_L1 = 1000
num_L2 = 10
num_epoch = int(main_params['num_epoch'])
minibatch_size = int(main_params['minibatch_size'])
# optimization setting: _alpha for momentum, _lambda for weight decay
_learning_rate = float(main_params['learning_rate'])
_step = 10
_alpha = float(main_params['alpha'])
_lambda = float(main_params['lambda'])
_dropout_rate = float(main_params['dropout_rate'])
_activation = main_params['activation']
if _activation == 'relu':
act = relu
else:
act = tanh
# create objects (modules) from the module classes
model['L1'] = linear_layer(input_D = d, output_D = num_L1)
model['nonlinear1'] = act()
model['drop1'] = dropout(r = _dropout_rate)
model['L2'] = linear_layer(input_D = num_L1, output_D = num_L2)
model['loss'] = softmax_cross_entropy()
# Momentum
if _alpha > 0.0:
momentum = add_momentum(model)
else:
momentum = None
train_acc_record = []
val_acc_record = []
train_loss_record = []
val_loss_record = []
### run training and validation ###
for t in range(num_epoch):
print('At epoch ' + str(t + 1))
if (t % _step == 0) and (t != 0):
_learning_rate = _learning_rate * 0.1
idx_order = np.random.permutation(N_train)
train_acc = 0.0
train_loss = 0.0
train_count = 0
val_acc = 0.0
val_count = 0
val_loss = 0.0
for i in range(int(np.floor(N_train / minibatch_size))):
# get a mini-batch of data
x, y = trainSet.get_example(idx_order[i * minibatch_size : (i + 1) * minibatch_size])
### forward ###
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = True)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
### backward ###
grad_d1 = model['L2'].backward(d1, grad_a2)
grad_h1 = model['drop1'].backward(h1, grad_d1)
grad_a1 = model['nonlinear1'].backward(a1, grad_h1)
######################################################################################
grad_x = model['L1'].backward(x, grad_a1)
### gradient_update ###
model = miniBatchGradientDescent(model, momentum, _lambda, _alpha, _learning_rate)
### Computing training accuracy and obj ###
for i in range(int(np.floor(N_train / minibatch_size))):
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = False)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
train_loss += loss
train_acc += np.sum(predict_label(a2) == y)
train_count += len(y)
train_loss = train_loss
train_acc = train_acc / train_count
train_acc_record.append(train_acc)
train_loss_record.append(train_loss)
print('Training loss at epoch ' + str(t + 1) + ' is ' + str(train_loss))
print('Training accuracy at epoch ' + str(t + 1) + ' is ' + str(train_acc))
### Computing validation accuracy ###
for i in range(int(np.floor(N_val / minibatch_size))):
x, y = valSet.get_example(np.arange(i * minibatch_size, (i + 1) * minibatch_size))
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = False)
a2 = model['L2'].forward(d1)
######################################################################################
loss = model['loss'].forward(a2, y)
val_loss += loss
val_acc += np.sum(predict_label(a2) == y)
val_count += len(y)
val_loss_record.append(val_loss)
val_acc = val_acc / val_count
val_acc_record.append(val_acc)
print('Validation accuracy at epoch ' + str(t + 1) + ' is ' + str(val_acc))
def main(main_params, optimization_type="minibatch_sgd"):
np.random.seed(int(main_params['random_seed']))
Xtrain, Ytrain, Xval, Yval, _, _ = data_loader_mnist(
dataset=main_params['input_file'])
N_train, d = Xtrain.shape
N_val, _ = Xval.shape
index = np.arange(10)
unique, counts = np.unique(Ytrain, return_counts=True)
counts = dict(zip(unique, counts)).values()
trainSet = DataSplit(Xtrain, Ytrain)
valSet = DataSplit(Xval, Yval)
model = dict()
num_L1 = 1000
num_L2 = 10
num_epoch = int(main_params['num_epoch'])
minibatch_size = int(main_params['minibatch_size'])
_learning_rate = float(main_params['learning_rate'])
_step = 10
_alpha = float(main_params['alpha'])
_lambda = float(main_params['lambda'])
_dropout_rate = float(main_params['dropout_rate'])
_activation = main_params['activation']
if _activation == 'relu':
act = relu
else:
act = tanh
model['L1'] = linear_layer(input_D=d, output_D=num_L1)
model['nonlinear1'] = act()
model['drop1'] = dropout(r=_dropout_rate)
model['L2'] = linear_layer(input_D=num_L1, output_D=num_L2)
model['loss'] = softmax_cross_entropy()
# Momentum
if _alpha > 0.0:
momentum = add_momentum(model)
else:
momentum = None
train_acc_record = []
val_acc_record = []
train_loss_record = []
val_loss_record = []
for t in range(num_epoch):
print('At epoch ' + str(t + 1))
if (t % _step == 0) and (t != 0):
_learning_rate = _learning_rate * 0.1
idx_order = np.random.permutation(N_train)
train_acc = 0.0
train_loss = 0.0
train_count = 0
val_acc = 0.0
val_count = 0
val_loss = 0.0
for i in range(int(np.floor(N_train / minibatch_size))):
# get a mini-batch of data
x, y = trainSet.get_example(idx_order[i * minibatch_size:(i + 1) *
minibatch_size])
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=True)
a2 = model['L2'].forward(d1)
a2 = model['L2'].forward(h1)
loss = model['loss'].forward(a2, y)
grad_a2 = model['loss'].backward(a2, y)
l2_backward = model['L2'].backward(d1, grad_a2)
drop1_backward = model['drop1'].backward(h1, l2_backward)
nonlinear1_backward = model['nonlinear1'].backward(
a1, drop1_backward)
grad_x = model['L1'].backward(x, nonlinear1_backward)
model = miniBatchGradientDescent(model, momentum, _lambda, _alpha,
_learning_rate)
for i in range(int(np.floor(N_train / minibatch_size))):
x, y = trainSet.get_example(
np.arange(i * minibatch_size, (i + 1) * minibatch_size))
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
loss = model['loss'].forward(a2, y)
train_loss += loss
train_acc += np.sum(predict_label(a2) == y)
train_count += len(y)
train_loss = train_loss
train_acc = train_acc / train_count
train_acc_record.append(train_acc)
train_loss_record.append(train_loss)
print('Training loss at epoch ' + str(t + 1) + ' is ' +
str(train_loss))
print('Training accuracy at epoch ' + str(t + 1) + ' is ' +
str(train_acc))
for i in range(int(np.floor(N_val / minibatch_size))):
x, y = valSet.get_example(
np.arange(i * minibatch_size, (i + 1) * minibatch_size))
a1 = model['L1'].forward(x)
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train=False)
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
loss = model['loss'].forward(a2, y)
val_loss += loss
val_acc += np.sum(predict_label(a2) == y)
val_count += len(y)
val_loss_record.append(val_loss)
val_acc = val_acc / val_count
val_acc_record.append(val_acc)
print('Validation accuracy at epoch ' + str(t + 1) + ' is ' +
str(val_acc))
json.dump(
{
'train': train_acc_record,
'val': val_acc_record
},
open(
'MLP_lr' + str(main_params['learning_rate']) + '_m' +
str(main_params['alpha']) + '_w' + str(main_params['lambda']) +
'_d' + str(main_params['dropout_rate']) + '_a' +
str(main_params['activation']) + '.json', 'w'))
print('Finish running!')
return train_loss_record, val_loss_record
def main(main_params, optimization_type="minibatch_sgd"):
### set the random seed ###
np.random.seed(int(main_params['random_seed']))
USAGE = 'neuralNetworkMT.py <number of neurons in hidden layer>' \
' <max number of Iterations> <train data> <test data>'
# if len(sys.argv) != 5:
# print(USAGE)
# else:
# num_neurons = int(sys.argv[1])
# num_iteration = int(sys.argv[2])
# train_data = sys.argv[3]
# test_data = sys.argv[4]
train_data = 'downgesture_train.list'
test_data = 'downgesture_test.list'
num_neurons = 100
num_iteration = 1000
# read input data and separate to 'down' and 'not_down' gestures files
print("start reading input text files")
train_files_label1, train_files_label0 = parse_file_list(train_data)
test_files_label1, test_files_label0 = parse_file_list(test_data)
print("start reading input pictures files")
data_one_train = read_pgm_image(train_files_label1, 1)
data_zero_train = read_pgm_image(train_files_label0, 0)
data_one_test = read_pgm_image(test_files_label1, 1)
data_zero_test = read_pgm_image(test_files_label0, 0)
# combine pgm data with corresponding labels in train and test
data_train = np.concatenate((data_one_train, data_zero_train), axis=0)
data_test = np.concatenate((data_one_test, data_zero_test), axis=0)
# shuffle and prepare data
print("start shuffling and splitting data")
np.random.seed(7)
np.random.shuffle(data_train)
# prepare data
Xtrain = data_train[:, :-1]
Ytrain = data_train[:, -1]
Xval = data_test[:, :-1]
Yval = data_test[:, -1]
### data processing ###
# Xtrain, Ytrain, Xval, Yval , _, _ = data_loader_mnist(dataset = main_params['input_file'])
N_train, d = Xtrain.shape
N_val, _ = Xval.shape
index = np.arange(10)
unique, counts = np.unique(Ytrain, return_counts=True)
counts = dict(zip(unique, counts)).values()
trainSet = DataSplit(Xtrain, Ytrain)
valSet = DataSplit(Xval, Yval)
### building/defining MLP ###
"""
In this script, we are going to build a MLP for a 10-class classification problem on MNIST.
The network structure is input --> linear --> relu --> dropout --> linear --> softmax_cross_entropy loss
the hidden_layer size (num_L1) is 100
the output_layer size (num_L2) is 10
"""
model = dict()
num_L1 = 100
num_L2 = 10
# experimental setup
num_epoch = int(main_params['num_epoch'])
minibatch_size = int(main_params['minibatch_size'])
# optimization setting: _alpha for momentum, _lambda for weight decay
_learning_rate = float(main_params['learning_rate'])
_step = 10
_alpha = float(main_params['alpha'])
_lambda = float(main_params['lambda'])
_dropout_rate = float(main_params['dropout_rate'])
_activation = main_params['activation']
if _activation == 'relu':
act = relu
else:
act = tanh
# create objects (modules) from the module classes
model['L1'] = linear_layer(input_D = d, output_D = num_L1)
model['nonlinear1'] = act()
model['drop1'] = dropout(r = _dropout_rate)
model['L2'] = linear_layer(input_D = num_L1, output_D = num_L2)
model['loss'] = softmax_cross_entropy()
# Momentum
if _alpha > 0.0:
momentum = add_momentum(model)
else:
momentum = None
train_acc_record = []
val_acc_record = []
train_loss_record = []
val_loss_record = []
### run training and validation ###
for t in range(num_epoch):
print('At epoch ' + str(t + 1))
if (t % _step == 0) and (t != 0):
_learning_rate = _learning_rate * 0.1
idx_order = np.random.permutation(N_train)
train_acc = 0.0
train_loss = 0.0
train_count = 0
val_acc = 0.0
val_count = 0
val_loss = 0.0
for i in range(int(np.floor(N_train / minibatch_size))):
# get a mini-batch of data
x, y = trainSet.get_example(idx_order[i * minibatch_size : (i + 1) * minibatch_size])
### forward ### x -L1> a1 -NL> h1 -Dr> d1 -L2> a2 -loss> y
a1 = model['L1'].forward(x) # a1 or u
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = True) # d1 or h after dropout
a2 = model['L2'].forward(d1)
loss = model['loss'].forward(a2, y)
### backward ###
grad_a2 = model['loss'].backward(a2, y)
######################################################################################
# TODO: Call the backward methods of every layer in the model in reverse order
# We have given the first and last backward calls
# Do not modify them.
######################################################################################
# raise NotImplementedError("Not Implemented BACKWARD PASS in main()")
grad_a2 = model['loss'].backward(a2, y)
grad_d1 = model['L2'].backward(d1, grad_a2)
grad_h1 = model['drop1'].backward(h1, grad_d1)
grad_a1 = model['nonlinear1'].backward(a1,grad_h1)
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
grad_x = model['L1'].backward(x, grad_a1)
### gradient_update ###
model = miniBatchGradientDescent(model, momentum, _lambda, _alpha, _learning_rate)
### Computing training accuracy and obj ###
for i in range(int(np.floor(N_train / minibatch_size))):
x, y = trainSet.get_example(np.arange(i * minibatch_size, (i + 1) * minibatch_size))
### forward ###
######################################################################################
# TODO: Call the forward methods of every layer in the model in order
# Check above forward code
######################################################################################
# raise NotImplementedError("Not Implemented COMPUTING TRAINING ACCURACY in main()")
a1 = model['L1'].forward(x) # a1 or u
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = True) # d1 or h after dropout
a2 = model['L2'].forward(d1)
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
loss = model['loss'].forward(a2, y)
train_loss += loss
train_acc += np.sum(predict_label(a2) == y)
train_count += len(y)
train_loss = train_loss
train_acc = train_acc / train_count
train_acc_record.append(train_acc)
train_loss_record.append(train_loss)
print('Training loss at epoch ' + str(t + 1) + ' is ' + str(train_loss))
print('Training accuracy at epoch ' + str(t + 1) + ' is ' + str(train_acc))
### Computing validation accuracy ###
for i in range(int(np.floor(N_val / minibatch_size))):
x, y = valSet.get_example(np.arange(i * minibatch_size, (i + 1) * minibatch_size))
### forward ###
######################################################################################
# TODO: Call the forward methods of every layer in the model in order
# Check above forward code
######################################################################################
a1 = model['L1'].forward(x) # a1 or u
h1 = model['nonlinear1'].forward(a1)
d1 = model['drop1'].forward(h1, is_train = True) # d1 or h after dropout
a2 = model['L2'].forward(d1)
# raise NotImplementedError("Not Implemented COMPUTING VALIDATION ACCURACY in main()")
######################################################################################
# NOTE: DO NOT MODIFY CODE BELOW THIS, until next TODO
######################################################################################
loss = model['loss'].forward(a2, y)
val_loss += loss
val_acc += np.sum(predict_label(a2) == y)
val_count += len(y)
val_loss_record.append(val_loss)
val_acc = val_acc / val_count
val_acc_record.append(val_acc)
print('Validation accuracy at epoch ' + str(t + 1) + ' is ' + str(val_acc))
# save file
json.dump({'train': train_acc_record, 'val': val_acc_record},
open('MLP_lr' + str(main_params['learning_rate']) +
'_m' + str(main_params['alpha']) +
'_w' + str(main_params['lambda']) +
'_d' + str(main_params['dropout_rate']) +
'_a' + str(main_params['activation']) +
'.json', 'w'))
print('Finish running!')
return train_loss_record, val_loss_record