def attempt_db_connect(self):
try:
print "attempting to connect", self.config_info
db = MySQLdb.connect(
self.config_info["database_server"],
self.config_info["database_user"],
self.config_info["database_password"],
self.config_info["database_name"],
)
db.close()
except:
db_dialog = DatabaseInfoDialog(
self,
self.config_info["database_server"],
self.config_info["database_name"],
self.config_info["database_user"],
)
response = db_dialog.run()
if response == Gtk.ResponseType.OK:
self.config_info["database_server"] = db_dialog.info["db_server"]
self.config_info["database_user"] = db_dialog.info["db_user"]
self.config_info["database_password"] = db_dialog.info["db_password"]
self.config_info["database_name"] = db_dialog.info["db_name"]
db_dialog.destroy()
self.attempt_db_connect()
else:
utils.write_to_config_file(self.config_info)
def attempt_db_connect(self):
try:
print 'attempting to connect', self.config_info
db = MySQLdb.connect(self.config_info['database_server'],
self.config_info['database_user'],
self.config_info['database_password'],
self.config_info['database_name'])
db.close()
except:
db_dialog = DatabaseInfoDialog(self,
self.config_info['database_server'],
self.config_info['database_name'],
self.config_info['database_user'])
response = db_dialog.run()
if response == Gtk.ResponseType.OK:
self.config_info['database_server'] = db_dialog.info[
'db_server']
self.config_info['database_user'] = db_dialog.info['db_user']
self.config_info['database_password'] = db_dialog.info[
'db_password']
self.config_info['database_name'] = db_dialog.info['db_name']
db_dialog.destroy()
self.attempt_db_connect()
else:
utils.write_to_config_file(self.config_info)
def check_protein_db(count):
results = get_db().query('SELECT count(*) from gene')
new_count = results[0][0]
print new_count
if int(new_count) != int(count):
update_protein_db()
config = utils.get_config()
config["count"] = new_count
utils.write_to_config_file(config)
def check_protein_db(count):
results = get_db().query('SELECT count(*) from gene')
new_count = results[0][0]
print new_count
if int(new_count) != int(count):
update_protein_db()
config = utils.get_config()
config["count"] = new_count
utils.write_to_config_file(config)
def on_folder_clicked(self, button, data):
name = data[0]
entry = data[1]
read = data[2]
dialog = Gtk.FileChooserDialog("Please choose a folder for %s" % read, self,
Gtk.FileChooserAction.CREATE_FOLDER,
(Gtk.STOCK_CANCEL, Gtk.ResponseType.CANCEL,
Gtk.STOCK_OPEN, Gtk.ResponseType.OK))
response = dialog.run()
if response == Gtk.ResponseType.OK:
print "File selected: " + dialog.get_filename()
self.config_info[name] = dialog.get_filename()
entry.set_text(self.config_info[name])
print name, self.config_info[name]
utils.write_to_config_file(self.config_info)
dialog.destroy()
def on_folder_clicked(self, button, data):
name = data[0]
entry = data[1]
read = data[2]
dialog = Gtk.FileChooserDialog("Please choose a folder for %s" % read, self,
Gtk.FileChooserAction.CREATE_FOLDER,
(Gtk.STOCK_CANCEL, Gtk.ResponseType.CANCEL,
Gtk.STOCK_OPEN, Gtk.ResponseType.OK))
response = dialog.run()
if response == Gtk.ResponseType.OK:
print "File selected: " + dialog.get_filename()
self.config_info[name] = dialog.get_filename()
entry.set_text(self.config_info[name])
print name, self.config_info[name]
utils.write_to_config_file(self.config_info)
dialog.destroy()
def on_entry_changed(self, entry, name):
self.config_info[name] = entry.get_text()
utils.write_to_config_file(self.config_info)
def on_entry_changed(self, entry, name):
self.config_info[name] = entry.get_text()
utils.write_to_config_file(self.config_info)
def on_pref_clicked(self, data):
dialog = PreferencesDialog(self, self.config_info)
response = dialog.run()
if response == Gtk.ResponseType.APPLY:
utils.write_to_config_file(self.config_info)
dialog.destroy()
def on_pref_clicked(self, data):
dialog = PreferencesDialog(self, self.config_info)
response = dialog.run()
if response == Gtk.ResponseType.APPLY:
utils.write_to_config_file(self.config_info)
dialog.destroy()
