def test_optional_field(self):
definition = {
"fields": {
"geographicFocus": {
"where": "?subj vivo:geoGraphicFocus ?obj .",
"optional": True
}
}
}
q = generate_sparql_construct(definition, "http://test/", "123")
self.assertTrue("""CONSTRUCT
{
?v0 :type ?v1 .
?v0 :geographicFocus ?v2 .
}
WHERE
{
BIND ((subj-ns:123) AS ?v0 )
{
?v0 vitro:mostSpecificType ?v1 .
}
OPTIONAL
{
?v0 vivo:geoGraphicFocus ?v2 .
}
}""" in q)
def test_child_field(self):
child_definition = {
"where": "?subj a bibo:Document .",
"fields": {
"title": {
"where": "?subj rdfs:label ?obj ."
},
"issue": {
"where": "?subj bibo:issue ?obj .",
"optional": True
}
}
}
definition = {
"fields": {
"publications": {
"where": """
?subj vivo:relatedBy ?aship .
?aship a vivo:Authorship .
?aship vivo:relates ?obj .
""",
"definition": child_definition,
"optional": True
}
}
}
q = generate_sparql_construct(definition, "http://test/", "123")
self.assertTrue("""CONSTRUCT
{
?v0 :type ?v1 .
?v0 :publications ?v2 .
?v2 :type ?v3 .
?v2 :issue ?v4 .
?v2 :title ?v5 .
}
WHERE
{
BIND ((subj-ns:123) AS ?v0 )
{
?v0 vitro:mostSpecificType ?v1 .
}
OPTIONAL
{
?v0 vivo:relatedBy ?aship .
?aship a vivo:Authorship .
?aship vivo:relates ?v2 .
?v2 vitro:mostSpecificType ?v3 .
?v2 a bibo:Document .
?v2 rdfs:label ?v5 .
OPTIONAL
{
?v2 bibo:issue ?v4 .
}
}
}""" in q)
def test_where(self):
definition = {
"where": "?subj a foaf:Person ."
}
q = generate_sparql_construct(definition, "http://test/", "123")
self.assertTrue("""WHERE
{
BIND ((subj-ns:123) AS ?v0 )
{
?v0 a foaf:Person .
?v0 vitro:mostSpecificType ?v1 .
}
}""" in q)
def test_list_field(self):
definition = {
"fields": {
"geographicFocus": {
"where": "?subj vivo:geoGraphicFocus ?obj .",
"list": True
}
}
}
q = generate_sparql_construct(definition, "http://test/", "123")
self.assertTrue("""CONSTRUCT
{
?v0 :type ?v1 .
?v0 :geographicFocus ?v2 .
?v0 :geographicFocus rdf:List .
}""" in q)
def execute(
definition,
subject_namespace,
subject_identifier,
endpoint,
username,
password,
serialization_format="json",
indent_size=4,
):
q = generate_sparql_construct(definition, subject_namespace, subject_identifier, indent_size=indent_size)
log.debug("Construct query: %s", q)
g = query(endpoint, username, password, q)
s = transform_graph(g, subject_namespace + subject_identifier)
o = _serialize(s, serialization_format, indent_size)
return o, s, g, q
def test_field(self):
definition = {
"fields": {
"name": {
"where": "?subj rdfs:label ?obj ."
}
}
}
q = generate_sparql_construct(definition, "http://test/", "123")
self.assertTrue("""CONSTRUCT
{
?v0 :type ?v1 .
?v0 :name ?v2 .
}
WHERE
{
BIND ((subj-ns:123) AS ?v0 )
{
?v0 vitro:mostSpecificType ?v1 .
?v0 rdfs:label ?v2 .
}
}""" in q)
