def BuildUpwindGradientBasedFeatureImage(self):
cast = vtk.vtkImageCast()
cast.SetInputData(self.Image)
cast.SetOutputScalarTypeToFloat()
cast.Update()
gradientMagnitude = vtkvmtk.vtkvmtkUpwindGradientMagnitudeImageFilter()
gradientMagnitude.SetInputConnection(cast.GetOutputPort())
gradientMagnitude.SetUpwindFactor(self.UpwindFactor)
gradientMagnitude.Update()
featureImage = None
if self.SigmoidRemapping==1:
scalarRange = gradientMagnitude.GetOutput().GetPointData().GetScalars().GetRange()
inputMinimum = scalarRange[0]
inputMaximum = scalarRange[1]
alpha = - (inputMaximum - inputMinimum) / 6.0
beta = (inputMaximum + inputMinimum) / 2.0
sigmoid = vtkvmtk.vtkvmtkSigmoidImageFilter()
sigmoid.SetInputConnection(gradientMagnitude.GetOutputPort())
sigmoid.SetAlpha(alpha)
sigmoid.SetBeta(beta)
sigmoid.SetOutputMinimum(0.0)
sigmoid.SetOutputMaximum(1.0)
sigmoid.Update()
featureImage = sigmoid.GetOutput()
else:
boundedReciprocal = vtkvmtk.vtkvmtkBoundedReciprocalImageFilter()
boundedReciprocal.SetInputConnection(gradientMagnitude.GetOutputPort())
boundedReciprocal.Update()
featureImage = boundedReciprocal.GetOutput()
self.FeatureImage = vtk.vtkImageData()
self.FeatureImage.DeepCopy(featureImage)
def BuildGradientBasedFeatureImage(self):
cast = vtk.vtkImageCast()
cast.SetInputData(self.Image)
cast.SetOutputScalarTypeToFloat()
cast.Update()
if (self.DerivativeSigma > 0.0):
gradientMagnitude = vtkvmtk.vtkvmtkGradientMagnitudeRecursiveGaussianImageFilter(
)
gradientMagnitude.SetInputConnection(cast.GetOutputPort())
gradientMagnitude.SetSigma(self.DerivativeSigma)
gradientMagnitude.SetNormalizeAcrossScale(0)
gradientMagnitude.Update()
else:
gradientMagnitude = vtkvmtk.vtkvmtkGradientMagnitudeImageFilter()
gradientMagnitude.SetInputConnection(cast.GetOutputPort())
gradientMagnitude.Update()
featureImage = None
if self.SigmoidRemapping == 1:
scalarRange = gradientMagnitude.GetOutput().GetPointData(
).GetScalars().GetRange()
inputMinimum = scalarRange[0]
inputMaximum = scalarRange[1]
alpha = -(inputMaximum - inputMinimum) / 6.0
beta = (inputMaximum + inputMinimum) / 2.0
sigmoid = vtkvmtk.vtkvmtkSigmoidImageFilter()
sigmoid.SetInputConnection(gradientMagnitude.GetOutputPort())
sigmoid.SetAlpha(alpha)
sigmoid.SetBeta(beta)
sigmoid.SetOutputMinimum(0.0)
sigmoid.SetOutputMaximum(1.0)
sigmoid.Update()
featureImage = sigmoid.GetOutput()
else:
boundedReciprocal = vtkvmtk.vtkvmtkBoundedReciprocalImageFilter()
boundedReciprocal.SetInputData(gradientMagnitude.GetOutput())
boundedReciprocal.Update()
featureImage = boundedReciprocal.GetOutput()
self.FeatureImage = vtk.vtkImageData()
self.FeatureImage.DeepCopy(featureImage)
def BuildGradientBasedFeatureImage(self):
cast = vtk.vtkImageCast()
cast.SetInput(self.Image)
cast.SetOutputScalarTypeToFloat()
cast.Update()
if (self.DerivativeSigma > 0.0):
gradientMagnitude = vtkvmtk.vtkvmtkGradientMagnitudeRecursiveGaussianImageFilter()
gradientMagnitude.SetInput(cast.GetOutput())
gradientMagnitude.SetSigma(self.DerivativeSigma)
gradientMagnitude.SetNormalizeAcrossScale(0)
gradientMagnitude.Update()
else:
gradientMagnitude = vtkvmtk.vtkvmtkGradientMagnitudeImageFilter()
gradientMagnitude.SetInput(cast.GetOutput())
gradientMagnitude.Update()
featureImage = None
if self.SigmoidRemapping==1:
scalarRange = gradientMagnitude.GetOutput().GetPointData().GetScalars().GetRange()
inputMinimum = scalarRange[0]
inputMaximum = scalarRange[1]
alpha = - (inputMaximum - inputMinimum) / 6.0
beta = (inputMaximum + inputMinimum) / 2.0
sigmoid = vtkvmtk.vtkvmtkSigmoidImageFilter()
sigmoid.SetInput(gradientMagnitude.GetOutput())
sigmoid.SetAlpha(alpha)
sigmoid.SetBeta(beta)
sigmoid.SetOutputMinimum(0.0)
sigmoid.SetOutputMaximum(1.0)
sigmoid.Update()
featureImage = sigmoid.GetOutput()
else:
boundedReciprocal = vtkvmtk.vtkvmtkBoundedReciprocalImageFilter()
boundedReciprocal.SetInput(gradientMagnitude.GetOutput())
boundedReciprocal.Update()
featureImage = boundedReciprocal.GetOutput()
self.FeatureImage = vtk.vtkImageData()
self.FeatureImage.DeepCopy(featureImage)
self.FeatureImage.Update()