def citation(record, pid, style=None, ln=None):
"""Render citation for record according to style and language."""
locale = ln or "en-US" # ln or current_i18n.language
style = style or "aapg-bulletin" # style or 'science'
try:
_record = WekoRecord.get_record(pid.object_uuid)
return citeproc_v1.serialize(pid, _record, style=style, locale=locale)
except Exception:
current_app.logger.exception(
'Citation formatting for record {0} failed.'.format(str(
record.id)))
return None
def get(self, pid_value, **kwargs):
"""Render citation for record according to style and language."""
style = request.values.get('style', 1) # style or 'science'
locale = request.values.get('locale', 2)
try:
pid = PersistentIdentifier.get('depid', pid_value)
record = WekoRecord.get_record(pid.object_uuid)
result = citeproc_v1.serialize(pid,
record,
style=style,
locale=locale)
return make_response(jsonify(result), 200)
except Exception:
current_app.logger.exception(
'Citation formatting for record {0} failed.'.format(
str(record.id)))
return make_response(jsonify("Not found"), 404)
def _is_record_in_index(self, record_id):
"""
Check record has register index.
:param record_id: Identifier of record
:return: True if record has register index_id
"""
from .utils import get_real_path, get_pid
if self.repository_id == current_app.config.get(
"WEKO_ROOT_INDEX", WEKO_ROOT_INDEX):
return True
if self.status:
record_pid = get_pid(record_id)
if record_pid:
record = WekoRecord.get_record(record_pid.object_uuid)
if record and record.get("path"):
list_path = get_real_path(record.get("path"))
if str(self.repository_id) in list_path:
return True
return False
def listrecords(**kwargs):
"""Create OAI-PMH response for verb ListRecords."""
def get_error_code_msg():
"""Get error by type."""
code = current_app.config.get('OAISERVER_CODE_NO_RECORDS_MATCH')
msg = current_app.config.get('OAISERVER_MESSAGE_NO_RECORDS_MATCH')
return [(code, msg)]
def append_deleted_record(e_listrecords, pid_object, rec):
"""Append attribute [status="deleted] for 'header' tag."""
e_record = SubElement(e_listrecords, etree.QName(NS_OAIPMH, 'record'))
header(e_record,
identifier=pid_object.pid_value,
datestamp=rec.updated,
sets=rec.get('_oai', {}).get('sets', []),
deleted=True)
record_dumper = serializer(kwargs['metadataPrefix'])
e_tree, e_listrecords = verb(**kwargs)
result = get_records(**kwargs)
identify = OaiIdentify.get_all()
if not result.total or not identify or \
(identify and not identify.outPutSetting):
return error(get_error_code_msg(), **kwargs)
for record in result.items:
try:
pid = oaiid_fetcher(record['id'], record['json']['_source'])
pid_object = OAIIDProvider.get(pid_value=pid.pid_value).pid
rec = WekoRecord.get_record(record['id'])
set_identifier(record, rec)
# Check output delete, noRecordsMatch
if not is_private_index(rec):
if is_deleted_workflow(pid_object) or \
is_private_workflow(rec):
append_deleted_record(e_listrecords, pid_object, rec)
continue
else:
append_deleted_record(e_listrecords, pid_object, rec)
continue
e_record = SubElement(e_listrecords,
etree.QName(NS_OAIPMH, 'record'))
header(
e_record,
identifier=pid.pid_value,
datestamp=record['updated'],
sets=record['json']['_source'].get('_oai', {}).get('sets', []),
)
e_metadata = SubElement(e_record,
etree.QName(NS_OAIPMH, 'metadata'))
etree_record = copy.deepcopy(record['json'])
# Merge licensetype and licensefree
handle_license_free(etree_record['_source']['_item_metadata'])
e_metadata.append(record_dumper(pid, etree_record))
except Exception:
current_app.logger.error(traceback.print_exc())
current_app.logger.error('Error when exporting item id ' +
str(record['id']))
# Check <record> tag not exist.
if len(e_listrecords) == 0:
return error(get_error_code_msg(), **kwargs)
resumption_token(e_listrecords, result, **kwargs)
return e_tree
def get_change_dump_manifest_xml(self, record_id):
"""Get change dump manifest xml.
:param record_id: Identifier of record
:return xml
"""
if not self._is_record_in_index(record_id) or not self._validation():
return None
cdm = ChangeDumpManifest()
cdm.up = '{}resync/{}/changedump.xml'.format(request.url_root,
self.repository_id)
if self.change_dump_manifest:
prev_id, prev_ver_id = record_id.split(".")
current_record = WekoRecord.get_record_by_pid(record_id)
from .utils import get_pid
prev_record_pid = get_pid('{}.{}'.format(prev_id,
str(int(prev_ver_id) -
1)))
if prev_record_pid:
prev_record = WekoRecord.get_record(
id_=prev_record_pid.object_uuid)
else:
prev_record = None
if current_record:
list_file = [file for file in current_record.files]
current_checksum = [
file.info().get('checksum')
for file in current_record.files
]
prev_checksum = []
if prev_record:
list_file.extend([file for file in prev_record.files])
prev_checksum = [
file.info().get('checksum')
for file in prev_record.files
]
for file in list_file:
file_info = file.info()
change = None
if file_info.get('checksum') in prev_checksum:
if file_info.get('checksum') in current_checksum:
change = None
if file_info.get('checksum') not in current_checksum:
change = 'deleted'
else:
if file_info.get('checksum') in current_checksum:
change = 'created'
path = 'recid_{}/{}'.format(current_record.get('recid'),
file_info.get('key'))
lastmod = str(datetime.datetime.utcnow().replace(
tzinfo=datetime.timezone.utc).isoformat())
if change:
re = Resource(
'{}record/{}/files/{}'.format(
request.url_root, current_record.get('recid'),
file_info.get('key')),
lastmod=lastmod,
sha256=file_info.get('checksum').split(':')[1],
length=str(file_info.get('size')),
path=path if change != 'delete' else '',
change=change)
cdm.add(re)
return cdm.as_xml()
def display_activity(activity_id=0):
"""Display activity."""
activity = WorkActivity()
activity_detail = activity.get_activity_detail(activity_id)
item = None
if activity_detail is not None and activity_detail.item_id is not None:
try:
item = ItemsMetadata.get_record(id_=activity_detail.item_id)
except NoResultFound as ex:
current_app.logger.exception(str(ex))
item = None
steps = activity.get_activity_steps(activity_id)
history = WorkActivityHistory()
histories = history.get_activity_history_list(activity_id)
workflow = WorkFlow()
workflow_detail = workflow.get_workflow_by_id(activity_detail.workflow_id)
if activity_detail.activity_status == \
ActivityStatusPolicy.ACTIVITY_FINALLY \
or activity_detail.activity_status == \
ActivityStatusPolicy.ACTIVITY_CANCEL:
activity_detail.activity_status_str = _('End')
else:
activity_detail.activity_status_str = \
request.args.get('status', 'ToDo')
cur_action = activity_detail.action
action_endpoint = cur_action.action_endpoint
action_id = cur_action.id
temporary_comment = activity.get_activity_action_comment(
activity_id=activity_id, action_id=action_id)
# display_activity of Identifier grant
idf_grant_data = None
if 'identifier_grant' == action_endpoint and item:
path = WekoRecord.get_record(item.id).get('path')
if len(path) > 1:
community_id = 'Root Index'
else:
index_address = path.pop(-1).split('/')
index_id = Index.query.filter_by(id=index_address.pop()).one()
community_id = get_community_id_by_index(
index_id.index_name_english)
idf_grant_data = Identifier.query.filter_by(
repository=community_id).one_or_none()
# valid date pidstore_identifier data
if idf_grant_data is not None:
if not idf_grant_data.jalc_doi:
idf_grant_data.jalc_doi = '<Empty>'
if not idf_grant_data.jalc_crossref_doi:
idf_grant_data.jalc_crossref_doi = '<Empty>'
if not idf_grant_data.jalc_datacite_doi:
idf_grant_data.jalc_datacite_doi = '<Empty>'
if not idf_grant_data.cnri:
idf_grant_data.cnri = '<Empty>'
if not idf_grant_data.suffix:
idf_grant_data.suffix = '<Empty>'
temporary_idf_grant = 0
temporary_idf_grant_suffix = []
temporary_identifier = activity.get_action_identifier_grant(
activity_id=activity_id, action_id=action_id)
if temporary_identifier:
temporary_idf_grant = temporary_identifier.get(
'action_identifier_select')
temporary_idf_grant_suffix.append(
temporary_identifier.get('action_identifier_jalc_doi'))
temporary_idf_grant_suffix.append(
temporary_identifier.get('action_identifier_jalc_cr_doi'))
temporary_idf_grant_suffix.append(
temporary_identifier.get('action_identifier_jalc_dc_doi'))
temporary_journal = activity.get_action_journal(activity_id=activity_id,
action_id=action_id)
if temporary_journal:
temporary_journal = temporary_journal.action_journal
cur_step = action_endpoint
step_item_login_url = None
approval_record = []
pid = None
record = {}
need_file = False
json_schema = ''
schema_form = ''
item_save_uri = ''
files = []
endpoints = {}
links = None
if 'item_login' == action_endpoint or 'file_upload' == action_endpoint:
activity_session = dict(activity_id=activity_id,
action_id=activity_detail.action_id,
action_version=cur_action.action_version,
action_status=ActionStatusPolicy.ACTION_DOING,
commond='')
session['activity_info'] = activity_session
# get item edit page info.
step_item_login_url, need_file, record, json_schema, \
schema_form, item_save_uri, files, endpoints = item_login(
item_type_id=workflow_detail.itemtype_id)
if item:
pid_identifier = PersistentIdentifier.get_by_object(
pid_type='depid', object_type='rec', object_uuid=item.id)
record = item
# if 'approval' == action_endpoint:
if item:
# get record data for the first time access to editing item screen
pid_identifier = PersistentIdentifier.get_by_object(
pid_type='depid', object_type='rec', object_uuid=item.id)
record_class = import_string('weko_deposit.api:WekoRecord')
resolver = Resolver(pid_type='recid',
object_type='rec',
getter=record_class.get_record)
pid, approval_record = resolver.resolve(pid_identifier.pid_value)
files = to_files_js(approval_record)
# get files data after click Save btn
sessionstore = RedisStore(
redis.StrictRedis.from_url('redis://{host}:{port}/1'.format(
host=os.getenv('INVENIO_REDIS_HOST', 'localhost'),
port=os.getenv('INVENIO_REDIS_PORT', '6379'))))
if sessionstore.redis.exists('activity_item_' + str(activity_id)):
item_str = sessionstore.get('activity_item_' + str(activity_id))
item_json = json.loads(item_str.decode('utf-8'))
if 'files' in item_json:
files = item_json.get('files')
if not files:
deposit = WekoDeposit.get_record(item.id)
if deposit is not None:
files = to_files_js(deposit)
from weko_deposit.links import base_factory
links = base_factory(pid)
res_check = check_authority_action(activity_id, action_id)
getargs = request.args
ctx = {'community': None}
community_id = ""
if 'community' in getargs:
comm = GetCommunity.get_community_by_id(request.args.get('community'))
community_id = request.args.get('community')
ctx = {'community': comm}
community_id = comm.id
# be use for index tree and comment page.
if 'item_login' == action_endpoint or 'file_upload' == action_endpoint:
session['itemlogin_id'] = activity_id
session['itemlogin_activity'] = activity_detail
session['itemlogin_item'] = item
session['itemlogin_steps'] = steps
session['itemlogin_action_id'] = action_id
session['itemlogin_cur_step'] = cur_step
session['itemlogin_record'] = approval_record
session['itemlogin_histories'] = histories
session['itemlogin_res_check'] = res_check
session['itemlogin_pid'] = pid
session['itemlogin_community_id'] = community_id
return render_template(
'weko_workflow/activity_detail.html',
render_widgets=True,
activity=activity_detail,
item=item,
steps=steps,
action_id=action_id,
cur_step=cur_step,
temporary_comment=temporary_comment,
temporary_journal=temporary_journal,
temporary_idf_grant=temporary_idf_grant,
temporary_idf_grant_suffix=temporary_idf_grant_suffix,
idf_grant_data=idf_grant_data,
idf_grant_input=IDENTIFIER_GRANT_LIST,
idf_grant_method=IDENTIFIER_GRANT_SUFFIX_METHOD,
record=approval_record,
records=record,
step_item_login_url=step_item_login_url,
need_file=need_file,
jsonschema=json_schema,
schemaform=schema_form,
id=workflow_detail.itemtype_id,
item_save_uri=item_save_uri,
files=files,
endpoints=endpoints,
error_type='item_login_error',
links=links,
histories=histories,
res_check=res_check,
pid=pid,
community_id=community_id,
**ctx)
def default_view_method(pid, record, filename=None, template=None, **kwargs):
"""Display default view.
Sends record_viewed signal and renders template.
:param pid: PID object.
:param record: Record object.
:param filename: File name.
:param template: Template to render.
:param kwargs: Additional view arguments based on URL rule.
:returns: The rendered template.
"""
# Get PID version object to retrieve all versions of item
pid_ver = PIDVersioning(child=pid)
if not pid_ver.exists or pid_ver.is_last_child:
abort(404)
active_versions = list(pid_ver.children or [])
all_versions = list(
pid_ver.get_children(ordered=True, pid_status=None) or [])
try:
if WekoRecord.get_record(id_=active_versions[-1].object_uuid
)['_deposit']['status'] == 'draft':
active_versions.pop()
if WekoRecord.get_record(id_=all_versions[-1].object_uuid
)['_deposit']['status'] == 'draft':
all_versions.pop()
except Exception:
pass
if active_versions:
# active_versions.remove(pid_ver.last_child)
active_versions.pop()
check_site_license_permission()
check_items_settings()
send_info = {}
send_info['site_license_flag'] = True \
if hasattr(current_user, 'site_license_flag') else False
send_info['site_license_name'] = current_user.site_license_name \
if hasattr(current_user, 'site_license_name') else ''
record_viewed.send(current_app._get_current_object(),
pid=pid,
record=record,
info=send_info)
community_arg = request.args.get('community')
community_id = ""
ctx = {'community': None}
if community_arg:
from weko_workflow.api import GetCommunity
comm = GetCommunity.get_community_by_id(community_arg)
ctx = {'community': comm}
community_id = comm.id
# Get index style
style = IndexStyle.get(
current_app.config['WEKO_INDEX_TREE_STYLE_OPTIONS']['id'])
width = style.width if style else '3'
height = style.height if style else None
detail_condition = get_search_detail_keyword('')
# Add Item Reference data to Record Metadata
pid_without_ver = record.get("recid").split('.')[0]
res = ItemLink.get_item_link_info(pid_without_ver)
if res:
record["relation"] = res
else:
record["relation"] = {}
google_scholar_meta = _get_google_scholar_meta(record)
pdfcoverpage_set_rec = PDFCoverPageSettings.find(1)
# Check if user has the permission to download original pdf file
# and the cover page setting is set and its value is enable (not disabled)
can_download_original = check_original_pdf_download_permission(record) \
and pdfcoverpage_set_rec and pdfcoverpage_set_rec.avail != 'disable'
# Get item meta data
record['permalink_uri'] = None
permalink = get_record_permalink(record)
if not permalink:
record['permalink_uri'] = request.url
else:
record['permalink_uri'] = permalink
can_update_version = has_update_version_role(current_user)
datastore = RedisStore(
redis.StrictRedis.from_url(current_app.config['CACHE_REDIS_URL']))
cache_key = current_app.config['WEKO_ADMIN_CACHE_PREFIX'].\
format(name='display_stats')
if datastore.redis.exists(cache_key):
curr_display_setting = datastore.get(cache_key).decode('utf-8')
display_stats = True if curr_display_setting == 'True' else False
else:
display_stats = True
groups_price = get_groups_price(record)
billing_files_permission = get_billing_file_download_permission(
groups_price) if groups_price else None
billing_files_prices = get_min_price_billing_file_download(
groups_price, billing_files_permission) if groups_price else None
from weko_theme.utils import get_design_layout
# Get the design for widget rendering
page, render_widgets = get_design_layout(
request.args.get('community')
or current_app.config['WEKO_THEME_DEFAULT_COMMUNITY'])
if hasattr(current_i18n, 'language'):
index_link_list = get_index_link_list(current_i18n.language)
else:
index_link_list = get_index_link_list()
files_thumbnail = []
if record.files:
files_thumbnail = ObjectVersion.get_by_bucket(
record.get('_buckets').get('deposit')).\
filter_by(is_thumbnail=True).all()
files = []
for f in record.files:
if check_file_permission(record, f.data) or is_open_restricted(f.data):
files.append(f)
# Flag: can edit record
can_edit = True if pid == get_record_without_version(pid) else False
open_day_display_flg = current_app.config.get('OPEN_DATE_DISPLAY_FLG')
return render_template(template,
pid=pid,
pid_versioning=pid_ver,
active_versions=active_versions,
all_versions=all_versions,
record=record,
files=files,
display_stats=display_stats,
filename=filename,
can_download_original_pdf=can_download_original,
is_logged_in=current_user
and current_user.is_authenticated,
can_update_version=can_update_version,
page=page,
render_widgets=render_widgets,
community_id=community_id,
width=width,
detail_condition=detail_condition,
height=height,
index_link_enabled=style.index_link_enabled,
index_link_list=index_link_list,
google_scholar_meta=google_scholar_meta,
billing_files_permission=billing_files_permission,
billing_files_prices=billing_files_prices,
files_thumbnail=files_thumbnail,
can_edit=can_edit,
open_day_display_flg=open_day_display_flg,
**ctx,
**kwargs)
